Literature DB >> 21583587

N'-(3,4-Dihydroxy-benzyl-idene)acetohydrazide monohydrate.

Lu-Ping Lv, Tie-Ming Yu, Wen-Bo Yu, Wei-Wei Li, Xian-Chao Hu.   

Abstract

In the title compound, C(9)H(10)N(2)O(3)·H(2)O, the Schiff base mol-ecule is approximately planar, the dihedral angle between the benzene and acetohydrazide planes being 5.40 (7)°. An intra-molecular O-H⋯O hydrogen bond is observed. In the crystal, mol-ecules are linked into a two-dimensional network parallel to (100) by O-H⋯O, N-H⋯O, O-H⋯N and C-H⋯O hydrogen bonds, and by π-π inter-actions between symmetry-related benzene rings [centroid-centroid distance = 3.543 (2) Å].

Entities:  

Year:  2009        PMID: 21583587      PMCID: PMC2977139          DOI: 10.1107/S1600536809027299

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to Schiff bases, see: Cimerman et al. (1997 ▶); Offe et al. (1952 ▶); Richardson et al. (1988 ▶). For related structures, see: Li & Jian (2008 ▶); Tamboura et al. (2009 ▶).

Experimental

Crystal data

C9H10N2O3·H2O M = 212.21 Monoclinic, a = 9.325 (4) Å b = 13.877 (7) Å c = 8.210 (4) Å β = 106.435 (5)° V = 1019.0 (8) Å3 Z = 4 Mo Kα radiation μ = 0.11 mm−1 T = 223 K 0.25 × 0.22 × 0.20 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2002 ▶) T min = 0.977, T max = 0.979 5060 measured reflections 1765 independent reflections 1640 reflections with I > 2σ(I) R int = 0.020

Refinement

R[F 2 > 2σ(F 2)] = 0.034 wR(F 2) = 0.102 S = 1.03 1765 reflections 148 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.17 e Å−3 Δρmin = −0.18 e Å−3 Data collection: SMART (Bruker, 2002 ▶); cell refinement: SAINT (Bruker, 2002 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809027299/ci2851sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809027299/ci2851Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C9H10N2O3·H2OF(000) = 448
Mr = 212.21Dx = 1.383 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 1765 reflections
a = 9.325 (4) Åθ = 2.3–25.0°
b = 13.877 (7) ŵ = 0.11 mm1
c = 8.210 (4) ÅT = 223 K
β = 106.435 (5)°Block, colourless
V = 1019.0 (8) Å30.25 × 0.22 × 0.20 mm
Z = 4
Bruker SMART CCD area-detector diffractometer1765 independent reflections
Radiation source: fine-focus sealed tube1640 reflections with I > 2σ(I)
graphiteRint = 0.020
φ and ω scansθmax = 25.0°, θmin = 2.3°
Absorption correction: multi-scan (SADABS; Bruker, 2002)h = −10→11
Tmin = 0.977, Tmax = 0.979k = −16→15
5060 measured reflectionsl = −9→9
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.034H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.102w = 1/[σ2(Fo2) + (0.061P)2 + 0.2305P] where P = (Fo2 + 2Fc2)/3
S = 1.03(Δ/σ)max = 0.001
1765 reflectionsΔρmax = 0.17 e Å3
148 parametersΔρmin = −0.17 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.048 (5)
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
H1E0.587 (2)0.2853 (17)0.445 (3)0.074 (7)*
H1F0.708 (3)0.3160 (19)0.554 (4)0.098 (9)*
O10.52471 (13)0.68267 (7)0.22048 (14)0.0454 (3)
H10.48990.65820.29190.068*
O20.56486 (12)0.50802 (7)0.36246 (13)0.0457 (3)
H20.58200.45280.39810.068*
O30.95803 (14)0.14282 (8)0.12355 (14)0.0552 (4)
C10.70188 (15)0.45382 (10)0.16721 (16)0.0341 (3)
H1A0.71580.39230.21400.041*
C60.75933 (14)0.47698 (10)0.03162 (16)0.0338 (3)
C20.62483 (15)0.52199 (9)0.23148 (16)0.0328 (3)
C30.60346 (15)0.61461 (10)0.16033 (17)0.0345 (3)
C70.84173 (15)0.40745 (10)−0.04047 (17)0.0366 (3)
H70.87690.4262−0.13090.044*
C80.99310 (16)0.17592 (10)0.00126 (17)0.0375 (3)
C40.66068 (17)0.63811 (11)0.02822 (19)0.0418 (4)
H40.64730.6998−0.01790.050*
C50.73807 (16)0.56971 (11)−0.03575 (18)0.0412 (4)
H50.77650.5859−0.12510.049*
N10.86712 (13)0.32131 (8)0.01702 (14)0.0364 (3)
N20.94966 (13)0.26400 (9)−0.06162 (14)0.0380 (3)
H2A0.97280.2846−0.14970.046*
C91.08651 (18)0.12110 (13)−0.08811 (19)0.0483 (4)
H9A1.18430.1107−0.01170.072*
H9B1.09490.1573−0.18460.072*
H9C1.04030.0601−0.12540.072*
O1W0.62190 (16)0.32929 (8)0.51868 (17)0.0472 (3)
U11U22U33U12U13U23
O10.0601 (7)0.0354 (6)0.0490 (6)0.0077 (5)0.0288 (5)0.0011 (4)
O20.0665 (7)0.0386 (6)0.0438 (6)0.0082 (5)0.0350 (5)0.0048 (4)
O30.0887 (9)0.0445 (6)0.0447 (6)0.0080 (6)0.0390 (6)0.0052 (5)
C10.0409 (7)0.0310 (7)0.0331 (7)0.0005 (5)0.0148 (6)0.0008 (5)
C60.0349 (7)0.0369 (7)0.0319 (7)−0.0028 (5)0.0133 (5)−0.0022 (5)
C20.0366 (7)0.0349 (7)0.0295 (6)−0.0026 (5)0.0138 (5)−0.0019 (5)
C30.0365 (7)0.0322 (7)0.0362 (7)−0.0008 (5)0.0127 (5)−0.0031 (5)
C70.0399 (7)0.0420 (8)0.0324 (7)−0.0034 (6)0.0175 (6)−0.0014 (6)
C80.0438 (8)0.0430 (8)0.0273 (6)0.0011 (6)0.0126 (6)−0.0035 (5)
C40.0499 (8)0.0342 (8)0.0461 (8)0.0014 (6)0.0213 (7)0.0073 (6)
C50.0457 (8)0.0443 (8)0.0401 (8)−0.0023 (6)0.0229 (6)0.0055 (6)
N10.0408 (6)0.0401 (7)0.0336 (6)0.0012 (5)0.0191 (5)−0.0028 (5)
N20.0478 (7)0.0425 (7)0.0317 (6)0.0049 (5)0.0242 (5)0.0012 (5)
C90.0533 (9)0.0556 (10)0.0388 (8)0.0155 (7)0.0177 (7)0.0000 (7)
O1W0.0532 (7)0.0412 (6)0.0542 (7)0.0047 (5)0.0265 (6)−0.0013 (5)
O1—C31.3713 (17)C7—H70.93
O1—H10.82C8—N21.3439 (19)
O2—C21.3591 (17)C8—C91.496 (2)
O2—H20.82C4—C51.383 (2)
O3—C81.2296 (18)C4—H40.93
C1—C21.3799 (19)C5—H50.93
C1—C61.4025 (19)N1—N21.3868 (16)
C1—H1A0.93N2—H2A0.86
C6—C51.392 (2)C9—H9A0.96
C6—C71.4592 (19)C9—H9B0.96
C2—C31.4025 (19)C9—H9C0.96
C3—C41.377 (2)O1W—H1E0.85 (3)
C7—N11.2823 (19)O1W—H1F0.80 (3)
C3—O1—H1109.5N2—C8—C9115.35 (12)
C2—O2—H2109.5C3—C4—C5119.80 (13)
C2—C1—C6120.24 (12)C3—C4—H4120.1
C2—C1—H1A119.9C5—C4—H4120.1
C6—C1—H1A119.9C4—C5—C6120.95 (13)
C5—C6—C1118.93 (13)C4—C5—H5119.5
C5—C6—C7118.82 (12)C6—C5—H5119.5
C1—C6—C7122.25 (12)C7—N1—N2115.60 (11)
O2—C2—C1125.46 (12)C8—N2—N1119.30 (11)
O2—C2—C3114.74 (12)C8—N2—H2A120.3
C1—C2—C3119.80 (12)N1—N2—H2A120.3
O1—C3—C4119.15 (12)C8—C9—H9A109.5
O1—C3—C2120.57 (12)C8—C9—H9B109.5
C4—C3—C2120.28 (13)H9A—C9—H9B109.5
N1—C7—C6122.05 (12)C8—C9—H9C109.5
N1—C7—H7119.0H9A—C9—H9C109.5
C6—C7—H7119.0H9B—C9—H9C109.5
O3—C8—N2122.18 (13)H1E—O1W—H1F103 (2)
O3—C8—C9122.47 (14)
C2—C1—C6—C50.4 (2)O1—C3—C4—C5−178.86 (13)
C2—C1—C6—C7179.90 (12)C2—C3—C4—C50.7 (2)
C6—C1—C2—O2−179.73 (12)C3—C4—C5—C60.0 (2)
C6—C1—C2—C30.3 (2)C1—C6—C5—C4−0.5 (2)
O2—C2—C3—O1−1.26 (18)C7—C6—C5—C4179.97 (13)
C1—C2—C3—O1178.75 (12)C6—C7—N1—N2−178.62 (11)
O2—C2—C3—C4179.15 (12)O3—C8—N2—N12.4 (2)
C1—C2—C3—C4−0.8 (2)C9—C8—N2—N1−177.75 (12)
C5—C6—C7—N1179.01 (13)C7—N1—N2—C8173.80 (12)
C1—C6—C7—N1−0.5 (2)
D—H···AD—HH···AD···AD—H···A
O1—H1···O20.822.222.6694 (18)115
O1—H1···O1Wi0.822.112.8529 (18)151
O1W—H1F···O3ii0.80 (3)2.31 (3)3.031 (2)152 (3)
O1W—H1F···N1ii0.80 (3)2.48 (3)3.101 (2)135 (2)
O2—H2···O1W0.821.962.7736 (18)171
N2—H2A···O3iii0.862.092.9110 (19)160
C7—H7···O3iii0.932.533.311 (2)142
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1⋯O20.822.222.6694 (18)115
O1—H1⋯O1Wi0.822.112.8529 (18)151
O1W—H1F⋯O3ii0.80 (3)2.31 (3)3.031 (2)152 (3)
O1W—H1F⋯N1ii0.80 (3)2.48 (3)3.101 (2)135 (2)
O2—H2⋯O1W0.821.962.7736 (18)171
N2—H2A⋯O3iii0.862.092.9110 (19)160
C7—H7⋯O3iii0.932.533.311 (2)142

Symmetry codes: (i) ; (ii) ; (iii) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  N'-[1-(4-Methoxy-phen-yl)ethyl-idene]acetohydrazide.

Authors:  Yu-Feng Li; Fang-Fang Jian
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-11-22

3.  Chlorido[N'-(2-oxidobenzil-idene)acetohydrazide-κO,N',O']copper(II) dihydrate.

Authors:  Farba Bouyagui Tamboura; Mohamed Gaye; Abdou Salam Sall; Aliou Hamady Barry; Youssouph Bah
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-01-08
  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.