| Literature DB >> 21577600 |
Wei-Wei Li, Tie-Ming Yu, Wen-Bo Yu, Lu-Ping Lv, Xian-Chao Hu.
Abstract
The title compound, C(11)H(15)N(3)O, crystallizes with two independent mol-ecules per asymmetric unit which differ slightly in their side-chain orientations: the C=Entities:
Year: 2009 PMID: 21577600 PMCID: PMC2969918 DOI: 10.1107/S1600536809032619
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C11H15N3O | |
| Orthorhombic, | Mo |
| Hall symbol: -P 2ac 2ab | Cell parameters from 3944 reflections |
| θ = 1.5–25.0° | |
| µ = 0.08 mm−1 | |
| Block, colourless | |
| 0.25 × 0.21 × 0.19 mm |
| Bruker SMART CCD area-detector diffractometer | 3944 independent reflections |
| Radiation source: fine-focus sealed tube | 2266 reflections with |
| graphite | |
| φ and ω scans | θmax = 25.0°, θmin = 1.6° |
| Absorption correction: multi-scan ( | |
| 25277 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max = 0.009 | |
| 3944 reflections | Δρmax = 0.26 e Å−3 |
| 278 parameters | Δρmin = −0.25 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0088 (18) |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| O1 | 0.0047 (3) | 0.29181 (12) | −0.13459 (9) | 0.0780 (8) | |
| O2 | 0.1988 (3) | 0.06574 (13) | 0.42455 (9) | 0.0870 (9) | |
| C1 | −0.2222 (5) | 0.2853 (2) | 0.26167 (14) | 0.0876 (12) | |
| H1A | −0.2352 | 0.2920 | 0.2977 | 0.131* | |
| H1B | −0.1581 | 0.2469 | 0.2560 | 0.131* | |
| H1C | −0.3217 | 0.2784 | 0.2461 | 0.131* | |
| C2 | −0.0788 (5) | 0.3912 (2) | 0.27440 (14) | 0.0960 (13) | |
| H2A | −0.1206 | 0.3847 | 0.3080 | 0.144* | |
| H2B | −0.1011 | 0.4357 | 0.2631 | 0.144* | |
| H2C | 0.0314 | 0.3845 | 0.2752 | 0.144* | |
| C3 | −0.1822 (4) | 0.30188 (16) | 0.15390 (12) | 0.0642 (9) | |
| H3 | −0.2554 | 0.2715 | 0.1657 | 0.077* | |
| C4 | −0.1112 (4) | 0.34523 (16) | 0.18857 (12) | 0.0609 (9) | |
| C5 | −0.0040 (4) | 0.38962 (16) | 0.16863 (13) | 0.0705 (10) | |
| H5 | 0.0450 | 0.4197 | 0.1903 | 0.085* | |
| C6 | 0.0317 (4) | 0.39019 (17) | 0.11734 (13) | 0.0711 (10) | |
| H6A | 0.1039 | 0.4208 | 0.1053 | 0.085* | |
| C7 | −0.0365 (4) | 0.34675 (16) | 0.08350 (12) | 0.0602 (9) | |
| C8 | −0.1463 (4) | 0.30314 (16) | 0.10280 (12) | 0.0636 (9) | |
| H8 | −0.1968 | 0.2741 | 0.0807 | 0.076* | |
| C9 | 0.0084 (4) | 0.34839 (18) | 0.03007 (12) | 0.0678 (9) | |
| H9 | 0.0781 | 0.3809 | 0.0194 | 0.081* | |
| C10 | −0.0398 (4) | 0.27958 (17) | −0.09107 (14) | 0.0675 (10) | |
| C11 | −0.1489 (5) | 0.2237 (2) | −0.08028 (14) | 0.0894 (12) | |
| H11A | −0.1751 | 0.2236 | −0.0447 | 0.134* | |
| H11B | −0.1005 | 0.1821 | −0.0890 | 0.134* | |
| H11C | −0.2415 | 0.2292 | −0.1002 | 0.134* | |
| C12 | 0.0762 (5) | 0.1252 (2) | 0.01346 (13) | 0.0932 (13) | |
| H12A | 0.1036 | 0.1176 | −0.0215 | 0.140* | |
| H12B | 0.0797 | 0.1721 | 0.0206 | 0.140* | |
| H12C | −0.0268 | 0.1087 | 0.0196 | 0.140* | |
| C13 | 0.2661 (6) | 0.0345 (2) | 0.02456 (15) | 0.0972 (14) | |
| H13A | 0.2679 | 0.0387 | −0.0119 | 0.146* | |
| H13B | 0.2141 | −0.0060 | 0.0338 | 0.146* | |
| H13C | 0.3705 | 0.0335 | 0.0373 | 0.146* | |
| C14 | 0.1752 (4) | 0.09738 (16) | 0.09815 (12) | 0.0606 (9) | |
| C15 | 0.0720 (5) | 0.14273 (16) | 0.12098 (12) | 0.0684 (10) | |
| H15 | 0.0105 | 0.1699 | 0.1005 | 0.082* | |
| C16 | 0.0610 (4) | 0.14740 (16) | 0.17306 (12) | 0.0670 (9) | |
| H16 | −0.0087 | 0.1776 | 0.1871 | 0.080* | |
| C17 | 0.1510 (4) | 0.10824 (15) | 0.20548 (11) | 0.0579 (9) | |
| C18 | 0.2550 (4) | 0.06487 (16) | 0.18297 (12) | 0.0616 (9) | |
| H18 | 0.3176 | 0.0384 | 0.2036 | 0.074* | |
| C19 | 0.2681 (4) | 0.05990 (15) | 0.13102 (12) | 0.0647 (9) | |
| H19 | 0.3408 | 0.0308 | 0.1173 | 0.078* | |
| C20 | 0.1307 (4) | 0.11238 (16) | 0.26024 (12) | 0.0642 (9) | |
| H20 | 0.0637 | 0.1445 | 0.2732 | 0.077* | |
| C21 | 0.2309 (4) | 0.05138 (18) | 0.37994 (13) | 0.0684 (10) | |
| C22 | 0.3373 (4) | −0.00500 (18) | 0.36685 (13) | 0.0772 (11) | |
| H22A | 0.4084 | 0.0090 | 0.3408 | 0.116* | |
| H22B | 0.2775 | −0.0421 | 0.3547 | 0.116* | |
| H22C | 0.3942 | −0.0181 | 0.3967 | 0.116* | |
| N1 | −0.0433 (3) | 0.30740 (14) | −0.00272 (10) | 0.0689 (8) | |
| N2 | 0.0109 (3) | 0.31648 (14) | −0.05201 (10) | 0.0716 (8) | |
| H2 | 0.0794 | 0.3468 | −0.0576 | 0.086* | |
| N3 | −0.1490 (4) | 0.34348 (16) | 0.23945 (10) | 0.0791 (9) | |
| N4 | 0.1849 (4) | 0.09056 (14) | 0.04632 (10) | 0.0786 (9) | |
| N5 | 0.1997 (3) | 0.07432 (14) | 0.29129 (10) | 0.0647 (8) | |
| N6 | 0.1681 (3) | 0.08653 (14) | 0.34201 (10) | 0.0714 (8) | |
| H6 | 0.1049 | 0.1182 | 0.3495 | 0.086* |
| O1 | 0.0901 (19) | 0.0899 (18) | 0.0541 (16) | 0.0010 (14) | 0.0130 (13) | −0.0020 (12) |
| O2 | 0.105 (2) | 0.107 (2) | 0.0488 (15) | 0.0166 (16) | 0.0105 (14) | 0.0072 (12) |
| C1 | 0.107 (3) | 0.093 (3) | 0.063 (2) | 0.005 (2) | 0.020 (2) | 0.0040 (19) |
| C2 | 0.098 (3) | 0.123 (3) | 0.068 (3) | −0.004 (3) | −0.001 (2) | −0.026 (2) |
| C3 | 0.066 (2) | 0.068 (2) | 0.058 (2) | −0.0080 (17) | −0.0004 (17) | 0.0067 (16) |
| C4 | 0.063 (2) | 0.069 (2) | 0.050 (2) | 0.0069 (17) | −0.0043 (16) | 0.0006 (16) |
| C5 | 0.079 (3) | 0.069 (2) | 0.064 (2) | −0.0082 (18) | −0.002 (2) | −0.0084 (17) |
| C6 | 0.080 (3) | 0.067 (2) | 0.067 (2) | −0.0102 (18) | 0.003 (2) | 0.0036 (17) |
| C7 | 0.066 (2) | 0.0609 (19) | 0.054 (2) | 0.0026 (17) | −0.0044 (16) | 0.0072 (15) |
| C8 | 0.072 (2) | 0.068 (2) | 0.051 (2) | −0.0029 (18) | −0.0065 (17) | 0.0000 (15) |
| C9 | 0.078 (3) | 0.071 (2) | 0.054 (2) | 0.0010 (18) | 0.0016 (18) | 0.0029 (17) |
| C10 | 0.069 (2) | 0.077 (2) | 0.057 (2) | 0.0096 (19) | 0.0052 (18) | 0.0013 (18) |
| C11 | 0.098 (3) | 0.097 (3) | 0.073 (3) | −0.023 (2) | −0.006 (2) | 0.006 (2) |
| C12 | 0.114 (3) | 0.109 (3) | 0.057 (2) | 0.002 (3) | −0.010 (2) | 0.010 (2) |
| C13 | 0.135 (4) | 0.091 (3) | 0.066 (3) | 0.011 (3) | 0.007 (2) | −0.010 (2) |
| C14 | 0.073 (2) | 0.0649 (19) | 0.0436 (19) | −0.0063 (18) | −0.0001 (17) | −0.0009 (15) |
| C15 | 0.088 (3) | 0.063 (2) | 0.054 (2) | 0.0069 (19) | −0.0034 (18) | 0.0038 (16) |
| C16 | 0.072 (2) | 0.068 (2) | 0.062 (2) | 0.0115 (18) | 0.0025 (18) | −0.0035 (16) |
| C17 | 0.067 (2) | 0.0607 (19) | 0.0461 (19) | −0.0017 (16) | 0.0002 (16) | 0.0010 (14) |
| C18 | 0.068 (2) | 0.0658 (19) | 0.052 (2) | 0.0061 (16) | −0.0032 (17) | 0.0034 (15) |
| C19 | 0.079 (2) | 0.0608 (19) | 0.054 (2) | 0.0037 (17) | 0.0038 (18) | −0.0007 (15) |
| C20 | 0.067 (2) | 0.072 (2) | 0.054 (2) | 0.0025 (18) | 0.0035 (17) | −0.0050 (17) |
| C21 | 0.071 (2) | 0.087 (2) | 0.047 (2) | −0.0010 (19) | 0.0036 (18) | 0.0094 (18) |
| C22 | 0.080 (3) | 0.083 (2) | 0.068 (2) | 0.004 (2) | 0.0007 (19) | 0.0059 (18) |
| N1 | 0.076 (2) | 0.0802 (19) | 0.0506 (17) | 0.0032 (15) | 0.0036 (14) | 0.0104 (14) |
| N2 | 0.082 (2) | 0.0794 (18) | 0.0530 (18) | −0.0102 (16) | 0.0073 (15) | 0.0002 (14) |
| N3 | 0.095 (2) | 0.092 (2) | 0.0505 (18) | −0.0090 (18) | 0.0027 (16) | −0.0076 (15) |
| N4 | 0.105 (3) | 0.083 (2) | 0.0478 (18) | 0.0107 (17) | 0.0013 (16) | 0.0013 (14) |
| N5 | 0.0686 (19) | 0.0819 (18) | 0.0435 (16) | 0.0004 (15) | 0.0037 (14) | 0.0026 (13) |
| N6 | 0.077 (2) | 0.091 (2) | 0.0465 (17) | 0.0135 (16) | 0.0070 (15) | 0.0007 (14) |
| O1—C10 | 1.229 (4) | C12—H12A | 0.96 |
| O2—C21 | 1.236 (4) | C12—H12B | 0.96 |
| C1—N3 | 1.449 (5) | C12—H12C | 0.96 |
| C1—H1A | 0.96 | C13—N4 | 1.443 (5) |
| C1—H1B | 0.96 | C13—H13A | 0.96 |
| C1—H1C | 0.96 | C13—H13B | 0.96 |
| C2—N3 | 1.456 (5) | C13—H13C | 0.96 |
| C2—H2A | 0.96 | C14—N4 | 1.369 (4) |
| C2—H2B | 0.96 | C14—C19 | 1.396 (5) |
| C2—H2C | 0.96 | C14—C15 | 1.406 (5) |
| C3—C8 | 1.376 (4) | C15—C16 | 1.373 (4) |
| C3—C4 | 1.399 (4) | C15—H15 | 0.93 |
| C3—H3 | 0.93 | C16—C17 | 1.394 (4) |
| C4—N3 | 1.374 (4) | C16—H16 | 0.93 |
| C4—C5 | 1.386 (5) | C17—C18 | 1.381 (4) |
| C5—C6 | 1.380 (4) | C17—C20 | 1.450 (4) |
| C5—H5 | 0.93 | C18—C19 | 1.371 (4) |
| C6—C7 | 1.376 (5) | C18—H18 | 0.93 |
| C6—H6A | 0.93 | C19—H19 | 0.93 |
| C7—C8 | 1.384 (5) | C20—N5 | 1.265 (4) |
| C7—C9 | 1.454 (4) | C20—H20 | 0.93 |
| C8—H8 | 0.93 | C21—N6 | 1.334 (4) |
| C9—N1 | 1.271 (4) | C21—C22 | 1.496 (5) |
| C9—H9 | 0.93 | C22—H22A | 0.96 |
| C10—N2 | 1.337 (4) | C22—H22B | 0.96 |
| C10—C11 | 1.491 (5) | C22—H22C | 0.96 |
| C11—H11A | 0.96 | N1—N2 | 1.387 (3) |
| C11—H11B | 0.96 | N2—H2 | 0.86 |
| C11—H11C | 0.96 | N5—N6 | 1.380 (4) |
| C12—N4 | 1.450 (5) | N6—H6 | 0.86 |
| N3—C1—H1A | 109.5 | N4—C13—H13B | 109.5 |
| N3—C1—H1B | 109.5 | H13A—C13—H13B | 109.5 |
| H1A—C1—H1B | 109.5 | N4—C13—H13C | 109.4 |
| N3—C1—H1C | 109.5 | H13A—C13—H13C | 109.5 |
| H1A—C1—H1C | 109.5 | H13B—C13—H13C | 109.5 |
| H1B—C1—H1C | 109.5 | N4—C14—C19 | 121.6 (3) |
| N3—C2—H2A | 109.5 | N4—C14—C15 | 121.7 (3) |
| N3—C2—H2B | 109.5 | C19—C14—C15 | 116.6 (3) |
| H2A—C2—H2B | 109.5 | C16—C15—C14 | 120.8 (3) |
| N3—C2—H2C | 109.5 | C16—C15—H15 | 119.6 |
| H2A—C2—H2C | 109.5 | C14—C15—H15 | 119.6 |
| H2B—C2—H2C | 109.5 | C15—C16—C17 | 122.0 (3) |
| C8—C3—C4 | 121.5 (3) | C15—C16—H16 | 119.0 |
| C8—C3—H3 | 119.2 | C17—C16—H16 | 119.0 |
| C4—C3—H3 | 119.2 | C18—C17—C16 | 117.1 (3) |
| N3—C4—C5 | 122.8 (3) | C18—C17—C20 | 122.6 (3) |
| N3—C4—C3 | 120.7 (3) | C16—C17—C20 | 120.3 (3) |
| C5—C4—C3 | 116.5 (3) | C19—C18—C17 | 121.6 (3) |
| C6—C5—C4 | 121.4 (3) | C19—C18—H18 | 119.2 |
| C6—C5—H5 | 119.3 | C17—C18—H18 | 119.2 |
| C4—C5—H5 | 119.3 | C18—C19—C14 | 121.8 (3) |
| C7—C6—C5 | 121.9 (3) | C18—C19—H19 | 119.1 |
| C7—C6—H6A | 119.0 | C14—C19—H19 | 119.1 |
| C5—C6—H6A | 119.1 | N5—C20—C17 | 123.1 (3) |
| C6—C7—C8 | 117.2 (3) | N5—C20—H20 | 118.4 |
| C6—C7—C9 | 119.6 (3) | C17—C20—H20 | 118.4 |
| C8—C7—C9 | 123.3 (3) | O2—C21—N6 | 119.5 (3) |
| C3—C8—C7 | 121.4 (3) | O2—C21—C22 | 122.0 (3) |
| C3—C8—H8 | 119.3 | N6—C21—C22 | 118.5 (3) |
| C7—C8—H8 | 119.3 | C21—C22—H22A | 109.5 |
| N1—C9—C7 | 123.0 (3) | C21—C22—H22B | 109.5 |
| N1—C9—H9 | 118.5 | H22A—C22—H22B | 109.5 |
| C7—C9—H9 | 118.5 | C21—C22—H22C | 109.5 |
| O1—C10—N2 | 120.0 (3) | H22A—C22—H22C | 109.5 |
| O1—C10—C11 | 121.5 (3) | H22B—C22—H22C | 109.5 |
| N2—C10—C11 | 118.5 (3) | C9—N1—N2 | 115.3 (3) |
| C10—C11—H11A | 109.5 | C10—N2—N1 | 122.1 (3) |
| C10—C11—H11B | 109.4 | C10—N2—H2 | 119.0 |
| H11A—C11—H11B | 109.5 | N1—N2—H2 | 119.0 |
| C10—C11—H11C | 109.5 | C4—N3—C2 | 119.7 (3) |
| H11A—C11—H11C | 109.5 | C4—N3—C1 | 121.0 (3) |
| H11B—C11—H11C | 109.5 | C2—N3—C1 | 117.2 (3) |
| N4—C12—H12A | 109.5 | C14—N4—C13 | 120.0 (3) |
| N4—C12—H12B | 109.5 | C14—N4—C12 | 120.2 (3) |
| H12A—C12—H12B | 109.5 | C13—N4—C12 | 116.9 (3) |
| N4—C12—H12C | 109.5 | C20—N5—N6 | 114.9 (3) |
| H12A—C12—H12C | 109.5 | C21—N6—N5 | 123.0 (3) |
| H12B—C12—H12C | 109.5 | C21—N6—H6 | 118.5 |
| N4—C13—H13A | 109.5 | N5—N6—H6 | 118.5 |
| C8—C3—C4—N3 | 179.7 (3) | N4—C14—C19—C18 | −177.7 (3) |
| C8—C3—C4—C5 | 0.5 (5) | C15—C14—C19—C18 | 2.7 (5) |
| N3—C4—C5—C6 | 180.0 (3) | C18—C17—C20—N5 | −4.0 (5) |
| C3—C4—C5—C6 | −0.8 (5) | C16—C17—C20—N5 | 174.0 (3) |
| C4—C5—C6—C7 | −0.3 (5) | C7—C9—N1—N2 | 179.6 (3) |
| C5—C6—C7—C8 | 1.6 (5) | O1—C10—N2—N1 | 175.8 (3) |
| C5—C6—C7—C9 | −178.4 (3) | C11—C10—N2—N1 | −4.8 (5) |
| C4—C3—C8—C7 | 0.9 (5) | C9—N1—N2—C10 | −176.2 (3) |
| C6—C7—C8—C3 | −1.9 (5) | C5—C4—N3—C2 | 2.0 (5) |
| C9—C7—C8—C3 | 178.1 (3) | C3—C4—N3—C2 | −177.1 (3) |
| C6—C7—C9—N1 | 176.0 (3) | C5—C4—N3—C1 | −160.9 (3) |
| C8—C7—C9—N1 | −4.0 (5) | C3—C4—N3—C1 | 20.0 (5) |
| N4—C14—C15—C16 | 178.1 (3) | C19—C14—N4—C13 | 13.6 (5) |
| C19—C14—C15—C16 | −2.3 (5) | C15—C14—N4—C13 | −166.8 (4) |
| C14—C15—C16—C17 | 0.4 (5) | C19—C14—N4—C12 | 173.7 (3) |
| C15—C16—C17—C18 | 1.1 (5) | C15—C14—N4—C12 | −6.6 (5) |
| C15—C16—C17—C20 | −177.0 (3) | C17—C20—N5—N6 | 178.8 (3) |
| C16—C17—C18—C19 | −0.7 (5) | O2—C21—N6—N5 | 179.0 (3) |
| C20—C17—C18—C19 | 177.4 (3) | C22—C21—N6—N5 | −1.7 (5) |
| C17—C18—C19—C14 | −1.3 (5) | C20—N5—N6—C21 | −179.8 (3) |
| H··· | ||||
| N2—H2···O2i | 0.86 | 2.09 | 2.930 (4) | 166 |
| N6—H6···O1ii | 0.86 | 2.04 | 2.884 (4) | 165 |
| C3—H3···O1iii | 0.93 | 2.56 | 3.328 (4) | 140 |
| C11—H11A···N1 | 0.96 | 2.31 | 2.791 (5) | 110 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2⋯O2i | 0.86 | 2.09 | 2.930 (4) | 166 |
| N6—H6⋯O1ii | 0.86 | 2.04 | 2.884 (4) | 165 |
| C3—H3⋯O1iii | 0.93 | 2.56 | 3.328 (4) | 140 |
Symmetry codes: (i) ; (ii) ; (iii) .