Literature DB >> 21202015

Chlorido{2-[1-(2-pyridylmethyl-imino)eth-yl]pyrrolato-κN,N',N''}copper(II).

Rongqing Li1, Pusu Zhao, Guodong Tang, Yujia Tao.   

Abstract

The potential tridentate Schiff base ligand 2-[1-(2-pyridyl-methyl-imino)eth-yl]pyrrole (HL) was synthesized from the condensation of 2-acetyl-pyrrole with 2-amino-methyl-pyridine. The title compound, [Cu(C(12)H(12)N(3))Cl], was synthesized from HL and copper(II) chloride using triethyl-amine as a base to deprotonate the pyrrole NH group. The title compound is a monomer and the central copper(II) ion is bound to three N atoms of the deprotonated tridentate ligand and to one chloride ion in a square-planar N(3)Cl coordination.

Entities:  

Year:  2008        PMID: 21202015      PMCID: PMC2960930          DOI: 10.1107/S1600536808006934

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Bertrand & Kirkwood (1972 ▶); Brooker & Carter (1995 ▶); Brown et al. (1988 ▶); Garland et al. (1996 ▶).

Experimental

Crystal data

[Cu(C12H12N3)Cl] M = 297.24 Monoclinic, a = 8.830 (2) Å b = 7.2806 (15) Å c = 18.750 (4) Å β = 100.448 (4)° V = 1185.4 (4) Å3 Z = 4 Mo Kα radiation μ = 2.05 mm−1 T = 213 (2) K 0.24 × 0.18 × 0.16 mm

Data collection

Bruker SMART APEX CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2000 ▶) T min = 0.642, T max = 0.719 11059 measured reflections 2164 independent reflections 1840 reflections with I > 2σ(I) R int = 0.045

Refinement

R[F 2 > 2σ(F 2)] = 0.049 wR(F 2) = 0.124 S = 1.05 2164 reflections 156 parameters H-atom parameters constrained Δρmax = 0.38 e Å−3 Δρmin = −0.43 e Å−3 Data collection: SMART (Bruker, 2000 ▶); cell refinement: SAINT (Bruker, 2000 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808006934/hg2384sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808006934/hg2384Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu(C12H12N3)Cl]F000 = 604
Mr = 297.24Dx = 1.666 Mg m3
Monoclinic, P21/cMo Kα radiation λ = 0.71070 Å
Hall symbol: -P 2ybcCell parameters from 3740 reflections
a = 8.830 (2) Åθ = 2.1–25.6º
b = 7.2806 (15) ŵ = 2.05 mm1
c = 18.750 (4) ÅT = 213 (2) K
β = 100.448 (4)ºBlock, green
V = 1185.4 (4) Å30.24 × 0.18 × 0.16 mm
Z = 4
Bruker SMART APEX CCD diffractometer2164 independent reflections
Radiation source: sealed tube1840 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.045
T = 213(2) Kθmax = 25.4º
φ and ω scansθmin = 3.0º
Absorption correction: multi-scan(SADABS; Bruker, 2000)h = −10→10
Tmin = 0.642, Tmax = 0.719k = −7→8
11059 measured reflectionsl = −22→22
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.049H-atom parameters constrained
wR(F2) = 0.124  w = 1/[σ2(Fo2) + (0.06P)2 + 1.99P] where P = (Fo2 + 2Fc2)/3
S = 1.05(Δ/σ)max < 0.001
2164 reflectionsΔρmax = 0.38 e Å3
156 parametersΔρmin = −0.43 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cu10.50155 (6)0.79633 (7)0.42653 (3)0.0312 (2)
Cl10.64180 (13)0.80713 (16)0.33884 (6)0.0431 (3)
N10.6561 (4)0.6909 (5)0.5025 (2)0.0378 (9)
N20.3797 (4)0.7939 (5)0.50388 (19)0.0331 (8)
N30.3055 (4)0.9028 (5)0.37105 (17)0.0303 (8)
C10.8039 (6)0.6345 (6)0.5150 (3)0.0479 (12)
H10.86850.63600.48100.057*
C20.8452 (7)0.5741 (8)0.5857 (3)0.0648 (16)
H20.94120.52910.60730.078*
C30.7176 (7)0.5928 (7)0.6184 (3)0.0593 (15)
H30.71070.56260.66590.071*
C40.6022 (6)0.6658 (6)0.5659 (2)0.0423 (11)
C50.4452 (6)0.7218 (6)0.5646 (2)0.0413 (11)
C60.2223 (5)0.8562 (6)0.4865 (2)0.0374 (10)
H6A0.20820.96290.51560.045*
H6B0.15340.76010.49700.045*
C70.1863 (5)0.9048 (6)0.4073 (2)0.0327 (9)
C80.0406 (5)0.9525 (7)0.3731 (3)0.0434 (12)
H8−0.04100.94850.39820.052*
C90.0156 (6)1.0060 (7)0.3019 (3)0.0514 (13)
H9−0.08291.03740.27830.062*
C100.1382 (6)1.0128 (7)0.2655 (3)0.0471 (12)
H100.12491.05340.21780.057*
C110.2804 (5)0.9580 (6)0.3018 (2)0.0371 (10)
H110.36280.95930.27710.045*
C120.3689 (7)0.6982 (7)0.6292 (3)0.0551 (14)
H12A0.29950.79870.63150.083*
H12B0.44580.69600.67250.083*
H12C0.31240.58490.62490.083*
U11U22U33U12U13U23
Cu10.0315 (3)0.0342 (3)0.0282 (3)−0.0016 (2)0.0058 (2)0.0003 (2)
Cl10.0374 (6)0.0497 (7)0.0463 (7)0.0016 (5)0.0183 (5)0.0013 (5)
N10.038 (2)0.032 (2)0.039 (2)−0.0039 (16)−0.0028 (17)0.0009 (16)
N20.044 (2)0.0289 (18)0.0278 (19)−0.0009 (16)0.0090 (16)−0.0006 (15)
N30.0331 (18)0.0318 (18)0.0275 (18)−0.0058 (16)0.0094 (15)−0.0027 (15)
C10.043 (3)0.037 (3)0.057 (3)−0.003 (2)−0.010 (2)−0.007 (2)
C20.065 (4)0.051 (3)0.064 (4)0.008 (3)−0.028 (3)−0.009 (3)
C30.094 (4)0.035 (3)0.036 (3)0.005 (3)−0.022 (3)−0.002 (2)
C40.066 (3)0.025 (2)0.032 (2)−0.003 (2)−0.003 (2)−0.0036 (18)
C50.066 (3)0.025 (2)0.034 (2)−0.008 (2)0.010 (2)−0.0033 (19)
C60.045 (3)0.036 (2)0.037 (2)−0.005 (2)0.021 (2)−0.001 (2)
C70.038 (2)0.031 (2)0.031 (2)−0.0075 (19)0.0108 (18)−0.0060 (19)
C80.033 (2)0.050 (3)0.048 (3)−0.004 (2)0.011 (2)−0.005 (2)
C90.036 (3)0.057 (3)0.056 (3)0.006 (2)−0.003 (2)−0.009 (3)
C100.053 (3)0.053 (3)0.031 (2)−0.003 (2)−0.002 (2)−0.002 (2)
C110.034 (2)0.047 (3)0.031 (2)−0.004 (2)0.0074 (19)−0.005 (2)
C120.094 (4)0.042 (3)0.032 (3)−0.005 (3)0.018 (3)0.004 (2)
Cu1—N11.943 (4)C4—C51.441 (7)
Cu1—N21.956 (3)C5—C121.499 (7)
Cu1—N32.006 (3)C6—C71.503 (6)
Cu1—Cl12.2319 (12)C6—H6A0.9700
N1—C11.347 (6)C6—H6B0.9700
N1—C41.370 (6)C7—C81.374 (6)
N2—C51.291 (6)C8—C91.369 (7)
N2—C61.442 (6)C8—H80.9300
N3—C111.339 (5)C9—C101.381 (7)
N3—C71.354 (5)C9—H90.9300
C1—C21.381 (7)C10—C111.374 (6)
C1—H10.9300C10—H100.9300
C2—C31.384 (8)C11—H110.9300
C2—H20.9300C12—H12A0.9600
C3—C41.388 (7)C12—H12B0.9600
C3—H30.9300C12—H12C0.9600
N1—Cu1—N281.98 (16)C4—C5—C12121.7 (4)
N1—Cu1—N3163.31 (15)N2—C6—C7108.7 (3)
N2—Cu1—N381.33 (14)N2—C6—H6A110.0
N1—Cu1—Cl198.29 (12)C7—C6—H6A110.0
N2—Cu1—Cl1178.47 (10)N2—C6—H6B110.0
N3—Cu1—Cl198.40 (10)C7—C6—H6B110.0
C1—N1—C4106.6 (4)H6A—C6—H6B108.3
C1—N1—Cu1141.0 (4)N3—C7—C8121.0 (4)
C4—N1—Cu1112.4 (3)N3—C7—C6116.7 (4)
C5—N2—C6125.9 (4)C8—C7—C6122.3 (4)
C5—N2—Cu1116.0 (3)C9—C8—C7119.9 (4)
C6—N2—Cu1117.8 (3)C9—C8—H8120.0
C11—N3—C7118.5 (4)C7—C8—H8120.0
C11—N3—Cu1126.5 (3)C8—C9—C10119.3 (5)
C7—N3—Cu1114.8 (3)C8—C9—H9120.3
N1—C1—C2110.1 (5)C10—C9—H9120.3
N1—C1—H1125.0C11—C10—C9118.2 (5)
C2—C1—H1125.0C11—C10—H10120.9
C1—C2—C3107.4 (5)C9—C10—H10120.9
C1—C2—H2126.3N3—C11—C10122.9 (4)
C3—C2—H2126.3N3—C11—H11118.6
C2—C3—C4105.9 (5)C10—C11—H11118.6
C2—C3—H3127.0C5—C12—H12A109.5
C4—C3—H3127.0C5—C12—H12B109.5
N1—C4—C3109.9 (5)H12A—C12—H12B109.5
N1—C4—C5115.6 (4)C5—C12—H12C109.5
C3—C4—C5134.5 (5)H12A—C12—H12C109.5
N2—C5—C4113.9 (4)H12B—C12—H12C109.5
N2—C5—C12124.3 (5)
Cu1—N11.943 (4)
Cu1—N21.956 (3)
Cu1—N32.006 (3)
Cu1—Cl12.2319 (12)
N1—Cu1—N281.98 (16)
N1—Cu1—N3163.31 (15)
N2—Cu1—N381.33 (14)
N1—Cu1—Cl198.29 (12)
N2—Cu1—Cl1178.47 (10)
N3—Cu1—Cl198.40 (10)
  1 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  1 in total
  1 in total

1.  Chlorido[N'-(2-oxidobenzil-idene)acetohydrazide-κO,N',O']copper(II) dihydrate.

Authors:  Farba Bouyagui Tamboura; Mohamed Gaye; Abdou Salam Sall; Aliou Hamady Barry; Youssouph Bah
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-01-08
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.