Literature DB >> 21581487

Bis(2-amino-3-nitro-pyridinium) dichromate(VI).

Samah Akriche1, Mohamed Rzaigui.   

Abstract

The title compound, (C(5)H(6)N(3)O(2))(2)[Cr(2)O(7)], consists of 2-amino-3-nitro-pyridinium cations and discrete dichromate anions linked together by N-H⋯O and C-H⋯O hydrogen bonds, forming thick layers parallel to (101). Layer cohesion is ensured by N-H⋯O hydrogen bonding in addition to electrostatic and van der Waals inter-actions, forming a three-dimensional framework. The dichromate anion is located on a twofold axis that passes through its bridging O atom.

Entities:  

Year:  2008        PMID: 21581487      PMCID: PMC2968023          DOI: 10.1107/S1600536808043018

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Akriche & Rzaigui (2000 ▶); Khadhrani et al. (2006 ▶); Nicoud et al. (1997 ▶); Panunto et al. (1987 ▶); Sieroń (2007 ▶); Le Fur et al. (1998 ▶). For a discussion of hydrogen bonding, see: Desiraju (1989 ▶, 1995 ▶).

Experimental

Crystal data

(C5H6N3O2)2[Cr2O7] M = 496.26 Monoclinic, a = 14.799 (2) Å b = 7.464 (3) Å c = 17.870 (5) Å β = 116.71 (4)° V = 1763.3 (11) Å3 Z = 4 Mo Kα radiation μ = 1.31 mm−1 T = 298 K 0.25 × 0.23 × 0.19 mm

Data collection

Enraf–Nonius TurboCAD-4 diffractometer Absorption correction: none 3444 measured reflections 2123 independent reflections 1562 reflections with I > 2σ(I) R int = 0.021 2 standard reflections frequency: 120 min intensity decay: 3%

Refinement

R[F 2 > 2σ(F 2)] = 0.039 wR(F 2) = 0.106 S = 1.04 2123 reflections 132 parameters H-atom parameters constrained Δρmax = 0.44 e Å−3 Δρmin = −0.37 e Å−3 Data collection: CAD-4 EXPRESS (Enraf–Nonius, 1994 ▶); cell refinement: CAD-4 EXPRESS; data reduction: XCAD4 (Harms & Wocadlo, 1996 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-32 for Windows (Farrugia, 1998 ▶); DIAMOND (Brandenburg & Putz, 2005 ▶); software used to prepare material for publication: WinGX publication routines (Farrugia, 1999 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808043018/dn2417sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808043018/dn2417Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
(C5H6N3O2)2[Cr2O7]F(000) = 1000
Mr = 496.26Dx = 1.869 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 25 reflections
a = 14.799 (2) Åθ = 9–11°
b = 7.464 (3) ŵ = 1.31 mm1
c = 17.870 (5) ÅT = 298 K
β = 116.71 (4)°Diamond-shaped, brown
V = 1763.3 (11) Å30.25 × 0.23 × 0.19 mm
Z = 4
Enraf–Nonius TurboCAD-4 diffractometerRint = 0.021
Radiation source: fine-focus sealed tubeθmax = 28.0°, θmin = 2.6°
graphiteh = −19→19
non–profiled ω scansk = 0→9
3444 measured reflectionsl = −10→23
2123 independent reflections2 standard reflections every 120 min
1562 reflections with I > 2σ(I) intensity decay: 3%
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.039Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.106H-atom parameters constrained
S = 1.04w = 1/[σ2(Fo2) + (0.0546P)2 + 0.8978P] where P = (Fo2 + 2Fc2)/3
2123 reflections(Δ/σ)max = 0.002
132 parametersΔρmax = 0.44 e Å3
0 restraintsΔρmin = −0.37 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cr10.51253 (3)0.65455 (6)0.34930 (3)0.03488 (15)
O10.50000.5931 (6)0.25000.0760 (11)
O20.63121 (14)0.6372 (3)0.41598 (13)0.0434 (5)
O30.4736 (2)0.8522 (3)0.35084 (18)0.0672 (7)
O40.44934 (17)0.5121 (3)0.37400 (14)0.0544 (6)
O50.7372 (2)−0.1246 (3)0.67939 (16)0.0607 (7)
O60.6258 (2)−0.0987 (3)0.55077 (17)0.0687 (7)
N10.70398 (18)0.4291 (3)0.55486 (16)0.0416 (6)
H10.67300.50200.51390.050*
N20.58479 (19)0.2213 (4)0.47828 (16)0.0544 (7)
H2A0.55680.30040.43970.065*
H2B0.55940.11550.47190.065*
N30.69260 (19)−0.0377 (3)0.61537 (17)0.0425 (6)
C10.6667 (2)0.2622 (4)0.54739 (17)0.0351 (6)
C20.72292 (19)0.1482 (3)0.61610 (16)0.0317 (5)
C30.8061 (2)0.2088 (4)0.68474 (18)0.0402 (6)
H30.84090.13200.72960.048*
C40.8388 (2)0.3827 (4)0.6881 (2)0.0499 (8)
H40.89530.42520.73450.060*
C50.7856 (2)0.4899 (4)0.6213 (2)0.0494 (8)
H50.80630.60770.62180.059*
U11U22U33U12U13U23
Cr10.0320 (2)0.0429 (3)0.0274 (2)0.0004 (2)0.01125 (17)0.00519 (19)
O10.073 (2)0.122 (3)0.0321 (17)0.0000.0232 (17)0.000
O20.0357 (9)0.0461 (11)0.0406 (11)−0.0011 (9)0.0101 (9)0.0065 (9)
O30.0642 (15)0.0518 (14)0.0762 (18)0.0208 (12)0.0233 (14)0.0154 (12)
O40.0483 (12)0.0604 (14)0.0583 (13)−0.0093 (11)0.0272 (11)0.0052 (11)
O50.0850 (18)0.0428 (13)0.0624 (15)0.0050 (12)0.0402 (15)0.0172 (11)
O60.0712 (16)0.0492 (13)0.0703 (17)−0.0253 (12)0.0182 (14)−0.0142 (12)
N10.0445 (13)0.0357 (12)0.0502 (15)0.0080 (11)0.0263 (12)0.0123 (11)
N20.0428 (14)0.0691 (18)0.0389 (14)−0.0034 (13)0.0072 (12)0.0105 (13)
N30.0505 (14)0.0339 (12)0.0511 (15)−0.0035 (11)0.0298 (12)−0.0016 (12)
C10.0334 (12)0.0418 (15)0.0339 (14)0.0036 (12)0.0186 (11)0.0044 (12)
C20.0343 (12)0.0304 (12)0.0323 (13)0.0013 (11)0.0168 (11)0.0004 (11)
C30.0407 (14)0.0429 (15)0.0327 (14)0.0044 (12)0.0128 (12)0.0036 (12)
C40.0453 (16)0.0486 (18)0.0464 (17)−0.0110 (14)0.0122 (14)−0.0121 (14)
C50.0550 (18)0.0321 (15)0.068 (2)−0.0080 (13)0.0342 (17)−0.0074 (14)
Cr1—O31.588 (2)N2—H2A0.8600
Cr1—O41.603 (2)N2—H2B0.8600
Cr1—O21.625 (2)N3—C21.457 (3)
Cr1—O11.7601 (14)C1—C21.416 (4)
O1—Cr1i1.7601 (14)C2—C31.366 (4)
O5—N31.219 (3)C3—C41.377 (4)
O6—N31.221 (4)C3—H30.9300
N1—C51.336 (4)C4—C51.356 (5)
N1—C11.344 (4)C4—H40.9300
N1—H10.8600C5—H50.9300
N2—C11.320 (4)
O3—Cr1—O4110.50 (14)N2—C1—N1118.1 (3)
O3—Cr1—O2110.01 (13)N2—C1—C2127.3 (3)
O4—Cr1—O2108.49 (11)N1—C1—C2114.6 (2)
O3—Cr1—O1112.62 (17)C3—C2—C1121.3 (3)
O4—Cr1—O1107.14 (15)C3—C2—N3118.2 (2)
O2—Cr1—O1107.93 (9)C1—C2—N3120.4 (2)
Cr1i—O1—Cr1149.8 (3)C2—C3—C4120.5 (3)
C5—N1—C1124.7 (3)C2—C3—H3119.7
C5—N1—H1117.7C4—C3—H3119.7
C1—N1—H1117.7C5—C4—C3117.7 (3)
C1—N2—H2A120.0C5—C4—H4121.2
C1—N2—H2B120.0C3—C4—H4121.2
H2A—N2—H2B120.0N1—C5—C4121.1 (3)
O5—N3—O6123.8 (3)N1—C5—H5119.4
O5—N3—C2117.6 (3)C4—C5—H5119.4
O6—N3—C2118.6 (3)
D—H···AD—HH···AD···AD—H···A
N1—H1···O20.861.872.707 (3)165
N2—H2A···O40.862.172.974 (4)155
N2—H2B···O60.862.062.654 (4)125
N2—H2B···O6ii0.862.593.061 (4)116
C3—H3···O4iii0.932.583.494 (4)167
C4—H4···O3iv0.932.503.337 (4)150
C5—H5···O2v0.932.343.232 (4)160
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1⋯O20.861.872.707 (3)165
N2—H2A⋯O40.862.172.974 (4)155
N2—H2B⋯O60.862.062.654 (4)125
N2—H2B⋯O6i0.862.593.061 (4)116
C3—H3⋯O4ii0.932.583.494 (4)167
C4—H4⋯O3iii0.932.503.337 (4)150
C5—H5⋯O2iv0.932.343.232 (4)160

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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