| Literature DB >> 21580268 |
Hacali Necefoğlu, Efdal Cimen, Barış Tercan, Hakan Dal, Tuncer Hökelek.
Abstract
In the title centrosymmetric binuclear complex, [Cu(2)(C(8)H(7)O(2))(4)(C(6)H(6)N(2)O)(2)], the Cu atoms [Cu⋯Cu = 2.6375 (6) Å] are bridged by four 4-methyl-benzoate (PMB) ligands. The four nearest O atoms around each Cu(II) ion form a distorted square-planar arrangement, and the distorted square-pyramidal coordination is completed by the pyridine N atom of the isonicotinamide (INA) ligand. Each Cu(II) ion is displaced by 0.2633 (1) Å from the plane of the four O atoms, with an average Cu-O distance of 1.974 (2) Å. The dihedral angles between carboxyl-ate groups and the adjacent benzene rings are 7.88 (19) and 9.68 (10)°, while the benzene rings are oriented at a dihedral angle of 85.90 (9)°. The pyridine ring is oriented at dihedral angles of 8.59 (7) and 83.89 (9)° with respect to the benzene rings. In the crystal structure, inter-molecular N-H⋯O hydrogen bonds link the mol-ecules into a three-dimensional network. π-π contacts between the benzene rings and between the pyridine and benzene rings, [centroid-centroid distances = 3.563 (2) and 3.484 (2) Å, respectively] may further stabilize the crystal structure.Entities:
Year: 2010 PMID: 21580268 PMCID: PMC2983750 DOI: 10.1107/S1600536810006513
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Cu2(C8H7O2)4(C6H6N2O)2] | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 3119 reflections |
| θ = 2.5–25.4° | |
| µ = 1.10 mm−1 | |
| β = 102.128 (1)° | Block, green |
| 0.30 × 0.24 × 0.14 mm | |
| Bruker Kappa APEXII CCD area-detector diffractometer | 5101 independent reflections |
| Radiation source: fine-focus sealed tube | 3629 reflections with |
| graphite | |
| φ and ω scans | θmax = 28.3°, θmin = 1.7° |
| Absorption correction: multi-scan ( | |
| 20056 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 5101 reflections | (Δ/σ)max = 0.001 |
| 281 parameters | Δρmax = 0.47 e Å−3 |
| 0 restraints | Δρmin = −0.70 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of |
| Cu1 | 0.95060 (3) | 0.966319 (13) | 1.09852 (4) | 0.01099 (9) | |
| O1 | 0.81764 (18) | 0.95045 (8) | 0.9002 (2) | 0.0191 (4) | |
| O2 | 0.90275 (17) | 1.00855 (8) | 0.7371 (2) | 0.0168 (4) | |
| O3 | 1.04702 (19) | 0.90818 (8) | 1.0089 (2) | 0.0203 (4) | |
| O4 | 0.86037 (17) | 1.03478 (8) | 1.1481 (2) | 0.0180 (4) | |
| O5 | 0.70039 (18) | 0.75397 (8) | 1.5592 (2) | 0.0183 (4) | |
| N1 | 0.8976 (2) | 0.90548 (9) | 1.2719 (3) | 0.0139 (5) | |
| N2 | 0.7819 (3) | 0.81071 (11) | 1.7825 (3) | 0.0200 (6) | |
| H2A | 0.752 (3) | 0.7887 (13) | 1.854 (4) | 0.022 (8)* | |
| H2B | 0.818 (3) | 0.8419 (16) | 1.818 (4) | 0.047 (12)* | |
| C1 | 0.8203 (3) | 0.97549 (10) | 0.7606 (3) | 0.0130 (5) | |
| C2 | 0.7165 (2) | 0.96483 (11) | 0.6131 (3) | 0.0122 (5) | |
| C3 | 0.6147 (2) | 0.93399 (11) | 0.6322 (3) | 0.0138 (6) | |
| H3 | 0.6095 | 0.9196 | 0.7413 | 0.017* | |
| C4 | 0.5205 (3) | 0.92415 (11) | 0.4928 (3) | 0.0148 (6) | |
| H4 | 0.4508 | 0.9034 | 0.5077 | 0.018* | |
| C5 | 0.5265 (3) | 0.94428 (11) | 0.3308 (3) | 0.0147 (6) | |
| C6 | 0.6286 (3) | 0.97476 (11) | 0.3131 (3) | 0.0159 (6) | |
| H6 | 0.6344 | 0.9885 | 0.2035 | 0.019* | |
| C7 | 0.7225 (2) | 0.98563 (10) | 0.4518 (3) | 0.0128 (5) | |
| H7 | 0.7911 | 1.0072 | 0.4371 | 0.015* | |
| C8 | 0.4259 (3) | 0.93213 (12) | 0.1789 (3) | 0.0221 (6) | |
| H8A | 0.3516 | 0.9219 | 0.2179 | 0.033* | |
| H8B | 0.4498 | 0.9005 | 0.1132 | 0.033* | |
| H8C | 0.4106 | 0.9661 | 0.1064 | 0.033* | |
| C9 | 1.1213 (2) | 0.91754 (11) | 0.9141 (3) | 0.0133 (5) | |
| C10 | 1.1926 (3) | 0.86716 (11) | 0.8745 (3) | 0.0142 (6) | |
| C11 | 1.1638 (3) | 0.81263 (11) | 0.9227 (3) | 0.0188 (6) | |
| H11 | 1.0971 | 0.8075 | 0.9770 | 0.023* | |
| C12 | 1.2313 (3) | 0.76602 (12) | 0.8923 (3) | 0.0224 (7) | |
| H12 | 1.2090 | 0.7291 | 0.9232 | 0.027* | |
| C13 | 1.3314 (3) | 0.77232 (12) | 0.8172 (3) | 0.0206 (6) | |
| C14 | 1.3589 (3) | 0.82663 (12) | 0.7674 (3) | 0.0203 (6) | |
| H14 | 1.4264 | 0.8318 | 0.7146 | 0.024* | |
| C15 | 1.2897 (3) | 0.87351 (11) | 0.7932 (3) | 0.0176 (6) | |
| H15 | 1.3087 | 0.9101 | 0.7552 | 0.021* | |
| C16 | 1.4105 (3) | 0.72204 (13) | 0.7957 (4) | 0.0284 (7) | |
| H16A | 1.3606 | 0.6874 | 0.7780 | 0.043* | |
| H16B | 1.4748 | 0.7177 | 0.8985 | 0.043* | |
| H16C | 1.4473 | 0.7283 | 0.6967 | 0.043* | |
| C17 | 0.7944 (2) | 0.87572 (10) | 1.2239 (3) | 0.0134 (5) | |
| H17 | 0.7501 | 0.8796 | 1.1096 | 0.016* | |
| C18 | 0.7487 (2) | 0.83964 (11) | 1.3316 (3) | 0.0124 (5) | |
| H18 | 0.6757 | 0.8188 | 1.2916 | 0.015* | |
| C19 | 0.8121 (2) | 0.83446 (10) | 1.4999 (3) | 0.0127 (5) | |
| C20 | 0.9206 (3) | 0.86403 (11) | 1.5496 (3) | 0.0170 (6) | |
| H20 | 0.9674 | 0.8604 | 1.6626 | 0.020* | |
| C21 | 0.9600 (3) | 0.89878 (11) | 1.4330 (3) | 0.0152 (6) | |
| H21 | 1.0346 | 0.9188 | 1.4683 | 0.018* | |
| C22 | 0.7601 (3) | 0.79620 (11) | 1.6172 (3) | 0.0142 (6) |
| Cu1 | 0.01279 (18) | 0.01089 (15) | 0.00968 (13) | −0.00136 (15) | 0.00323 (11) | 0.00055 (13) |
| O1 | 0.0192 (11) | 0.0233 (11) | 0.0133 (9) | −0.0080 (9) | 0.0000 (8) | 0.0042 (7) |
| O2 | 0.0154 (11) | 0.0202 (10) | 0.0137 (8) | −0.0071 (8) | 0.0003 (7) | 0.0035 (7) |
| O3 | 0.0299 (13) | 0.0129 (9) | 0.0236 (10) | 0.0023 (9) | 0.0177 (9) | 0.0009 (8) |
| O4 | 0.0208 (11) | 0.0142 (9) | 0.0221 (9) | 0.0023 (9) | 0.0116 (8) | 0.0033 (8) |
| O5 | 0.0255 (12) | 0.0147 (10) | 0.0160 (9) | −0.0046 (9) | 0.0077 (8) | 0.0016 (7) |
| N1 | 0.0156 (13) | 0.0140 (11) | 0.0130 (10) | 0.0012 (10) | 0.0050 (9) | 0.0011 (8) |
| N2 | 0.0348 (17) | 0.0132 (12) | 0.0140 (11) | −0.0057 (12) | 0.0094 (11) | 0.0010 (9) |
| C1 | 0.0174 (15) | 0.0085 (13) | 0.0143 (11) | 0.0016 (11) | 0.0058 (10) | −0.0026 (9) |
| C2 | 0.0137 (14) | 0.0096 (11) | 0.0128 (11) | 0.0027 (11) | 0.0018 (9) | −0.0023 (10) |
| C3 | 0.0153 (16) | 0.0133 (13) | 0.0141 (12) | 0.0024 (11) | 0.0061 (10) | 0.0007 (10) |
| C4 | 0.0127 (15) | 0.0136 (13) | 0.0179 (12) | −0.0008 (11) | 0.0028 (11) | −0.0016 (10) |
| C5 | 0.0161 (16) | 0.0110 (12) | 0.0162 (12) | 0.0039 (11) | 0.0011 (10) | −0.0026 (10) |
| C6 | 0.0218 (16) | 0.0124 (13) | 0.0138 (11) | 0.0015 (11) | 0.0045 (11) | 0.0006 (10) |
| C7 | 0.0144 (15) | 0.0103 (12) | 0.0150 (12) | 0.0002 (11) | 0.0062 (10) | 0.0001 (9) |
| C8 | 0.0226 (18) | 0.0209 (15) | 0.0198 (13) | −0.0015 (13) | −0.0026 (12) | −0.0029 (11) |
| C9 | 0.0125 (15) | 0.0159 (13) | 0.0099 (11) | −0.0029 (11) | −0.0013 (10) | −0.0023 (9) |
| C10 | 0.0161 (16) | 0.0154 (13) | 0.0104 (11) | 0.0002 (11) | 0.0013 (10) | −0.0003 (10) |
| C11 | 0.0192 (17) | 0.0180 (14) | 0.0195 (13) | −0.0011 (12) | 0.0049 (11) | 0.0025 (11) |
| C12 | 0.0265 (19) | 0.0149 (14) | 0.0241 (14) | 0.0034 (13) | 0.0017 (12) | 0.0022 (11) |
| C13 | 0.0245 (18) | 0.0209 (15) | 0.0149 (13) | 0.0078 (13) | 0.0009 (11) | −0.0017 (11) |
| C14 | 0.0202 (17) | 0.0247 (16) | 0.0171 (13) | 0.0041 (13) | 0.0063 (11) | −0.0008 (11) |
| C15 | 0.0222 (17) | 0.0136 (13) | 0.0160 (12) | 0.0004 (12) | 0.0016 (11) | 0.0003 (10) |
| C16 | 0.036 (2) | 0.0219 (16) | 0.0264 (15) | 0.0131 (14) | 0.0043 (14) | 0.0000 (12) |
| C17 | 0.0183 (16) | 0.0113 (12) | 0.0110 (11) | 0.0004 (11) | 0.0036 (10) | −0.0014 (9) |
| C18 | 0.0138 (15) | 0.0112 (12) | 0.0130 (11) | −0.0006 (11) | 0.0049 (10) | −0.0026 (10) |
| C19 | 0.0177 (16) | 0.0093 (12) | 0.0127 (11) | 0.0007 (11) | 0.0065 (10) | −0.0005 (9) |
| C20 | 0.0202 (17) | 0.0189 (14) | 0.0108 (11) | −0.0003 (12) | 0.0003 (10) | 0.0026 (10) |
| C21 | 0.0140 (15) | 0.0152 (13) | 0.0160 (12) | −0.0036 (11) | 0.0026 (10) | 0.0002 (10) |
| C22 | 0.0186 (16) | 0.0134 (13) | 0.0118 (12) | 0.0009 (12) | 0.0060 (11) | 0.0033 (10) |
| Cu1—Cu1i | 2.6375 (6) | C8—H8A | 0.9800 |
| Cu1—O1 | 1.9733 (18) | C8—H8B | 0.9800 |
| Cu1—O2i | 1.9703 (18) | C8—H8C | 0.9800 |
| Cu1—O3 | 1.9687 (18) | C9—O4i | 1.259 (3) |
| Cu1—O4 | 1.9836 (18) | C9—C10 | 1.499 (4) |
| Cu1—N1 | 2.161 (2) | C10—C11 | 1.394 (4) |
| O1—C1 | 1.269 (3) | C10—C15 | 1.390 (4) |
| O2—Cu1i | 1.9703 (18) | C11—C12 | 1.381 (4) |
| O2—C1 | 1.252 (3) | C11—H11 | 0.9500 |
| O3—C9 | 1.259 (3) | C12—C13 | 1.389 (4) |
| O4—C9i | 1.259 (3) | C12—H12 | 0.9500 |
| O5—C22 | 1.232 (3) | C13—C14 | 1.389 (4) |
| N1—C17 | 1.338 (3) | C13—C16 | 1.508 (4) |
| N1—C21 | 1.342 (3) | C14—C15 | 1.387 (4) |
| N2—C22 | 1.339 (3) | C14—H14 | 0.9500 |
| N2—H2A | 0.89 (3) | C15—H15 | 0.9500 |
| N2—H2B | 0.85 (4) | C16—H16A | 0.9800 |
| C1—C2 | 1.497 (3) | C16—H16B | 0.9800 |
| C2—C3 | 1.388 (4) | C16—H16C | 0.9800 |
| C2—C7 | 1.397 (3) | C17—C18 | 1.382 (3) |
| C3—C4 | 1.387 (4) | C17—H17 | 0.9500 |
| C3—H3 | 0.9500 | C18—C19 | 1.391 (3) |
| C4—C5 | 1.395 (3) | C18—H18 | 0.9500 |
| C4—H4 | 0.9500 | C19—C20 | 1.387 (4) |
| C5—C6 | 1.384 (4) | C19—C22 | 1.503 (3) |
| C5—C8 | 1.503 (4) | C20—C21 | 1.381 (3) |
| C6—C7 | 1.385 (4) | C20—H20 | 0.9500 |
| C6—H6 | 0.9500 | C21—H21 | 0.9500 |
| C7—H7 | 0.9500 | ||
| O1—Cu1—Cu1i | 88.51 (5) | H8A—C8—H8B | 109.5 |
| O1—Cu1—O4 | 88.96 (8) | H8A—C8—H8C | 109.5 |
| O1—Cu1—N1 | 97.37 (8) | H8B—C8—H8C | 109.5 |
| O2i—Cu1—Cu1i | 79.79 (5) | O3—C9—O4i | 125.3 (2) |
| O2i—Cu1—O1 | 168.28 (7) | O3—C9—C10 | 116.2 (2) |
| O2i—Cu1—O4 | 90.82 (8) | O4i—C9—C10 | 118.6 (2) |
| O2i—Cu1—N1 | 94.19 (8) | C11—C10—C9 | 120.0 (2) |
| O3—Cu1—Cu1i | 82.21 (5) | C15—C10—C9 | 121.4 (2) |
| O3—Cu1—O1 | 87.53 (8) | C15—C10—C11 | 118.6 (3) |
| O3—Cu1—O2i | 90.25 (8) | C10—C11—H11 | 119.6 |
| O3—Cu1—O4 | 167.82 (7) | C12—C11—C10 | 120.7 (3) |
| O3—Cu1—N1 | 91.34 (8) | C12—C11—H11 | 119.6 |
| O4—Cu1—Cu1i | 86.04 (5) | C11—C12—C13 | 121.1 (3) |
| O4—Cu1—N1 | 100.68 (8) | C11—C12—H12 | 119.5 |
| N1—Cu1—Cu1i | 171.10 (6) | C13—C12—H12 | 119.5 |
| C1—O1—Cu1 | 117.87 (17) | C12—C13—C16 | 121.0 (3) |
| C1—O2—Cu1i | 128.72 (16) | C14—C13—C12 | 118.1 (3) |
| C9—O3—Cu1 | 125.69 (17) | C14—C13—C16 | 120.9 (3) |
| C9i—O4—Cu1 | 120.50 (17) | C13—C14—H14 | 119.3 |
| C17—N1—Cu1 | 119.94 (16) | C15—C14—C13 | 121.3 (3) |
| C17—N1—C21 | 117.5 (2) | C15—C14—H14 | 119.3 |
| C21—N1—Cu1 | 122.42 (18) | C10—C15—H15 | 119.9 |
| C22—N2—H2A | 118 (2) | C14—C15—C10 | 120.2 (3) |
| C22—N2—H2B | 121 (2) | C14—C15—H15 | 119.9 |
| H2A—N2—H2B | 120 (3) | C13—C16—H16A | 109.5 |
| O1—C1—C2 | 117.3 (2) | C13—C16—H16B | 109.5 |
| O2—C1—O1 | 125.1 (2) | C13—C16—H16C | 109.5 |
| O2—C1—C2 | 117.6 (2) | H16A—C16—H16B | 109.5 |
| C3—C2—C1 | 121.6 (2) | H16A—C16—H16C | 109.5 |
| C3—C2—C7 | 119.1 (2) | H16B—C16—H16C | 109.5 |
| C7—C2—C1 | 119.4 (2) | N1—C17—C18 | 123.6 (2) |
| C2—C3—H3 | 119.9 | N1—C17—H17 | 118.2 |
| C4—C3—C2 | 120.3 (2) | C18—C17—H17 | 118.2 |
| C4—C3—H3 | 119.9 | C17—C18—C19 | 118.5 (2) |
| C3—C4—C5 | 121.0 (3) | C17—C18—H18 | 120.7 |
| C3—C4—H4 | 119.5 | C19—C18—H18 | 120.7 |
| C5—C4—H4 | 119.5 | C18—C19—C22 | 118.1 (2) |
| C4—C5—C8 | 120.9 (3) | C20—C19—C18 | 118.3 (2) |
| C6—C5—C4 | 118.2 (2) | C20—C19—C22 | 123.6 (2) |
| C6—C5—C8 | 120.9 (2) | C19—C20—H20 | 120.4 |
| C5—C6—C7 | 121.4 (2) | C21—C20—C19 | 119.3 (2) |
| C5—C6—H6 | 119.3 | C21—C20—H20 | 120.4 |
| C7—C6—H6 | 119.3 | N1—C21—C20 | 122.8 (3) |
| C2—C7—H7 | 120.0 | N1—C21—H21 | 118.6 |
| C6—C7—C2 | 120.0 (2) | C20—C21—H21 | 118.6 |
| C6—C7—H7 | 120.0 | O5—C22—N2 | 123.4 (2) |
| C5—C8—H8A | 109.5 | O5—C22—C19 | 119.8 (2) |
| C5—C8—H8B | 109.5 | N2—C22—C19 | 116.9 (2) |
| C5—C8—H8C | 109.5 | ||
| Cu1i—Cu1—O1—C1 | −1.45 (18) | O2—C1—C2—C7 | 8.2 (4) |
| O2i—Cu1—O1—C1 | −4.4 (5) | C1—C2—C3—C4 | −179.2 (2) |
| O3—Cu1—O1—C1 | −83.72 (19) | C7—C2—C3—C4 | −0.1 (4) |
| O4—Cu1—O1—C1 | 84.61 (19) | C1—C2—C7—C6 | 178.2 (2) |
| N1—Cu1—O1—C1 | −174.75 (19) | C3—C2—C7—C6 | −0.9 (4) |
| Cu1i—Cu1—O3—C9 | 5.3 (2) | C2—C3—C4—C5 | 0.8 (4) |
| O1—Cu1—O3—C9 | 94.1 (2) | C3—C4—C5—C6 | −0.5 (4) |
| O2i—Cu1—O3—C9 | −74.4 (2) | C3—C4—C5—C8 | 178.2 (2) |
| O4—Cu1—O3—C9 | 20.7 (5) | C4—C5—C6—C7 | −0.5 (4) |
| N1—Cu1—O3—C9 | −168.6 (2) | C8—C5—C6—C7 | −179.2 (2) |
| Cu1i—Cu1—O4—C9i | −2.61 (18) | C5—C6—C7—C2 | 1.2 (4) |
| O1—Cu1—O4—C9i | −91.19 (19) | O3—C9—C10—C11 | 8.4 (4) |
| O2i—Cu1—O4—C9i | 77.09 (19) | O3—C9—C10—C15 | −170.2 (2) |
| O3—Cu1—O4—C9i | −17.9 (5) | O4i—C9—C10—C11 | −171.8 (2) |
| N1—Cu1—O4—C9i | 171.51 (19) | O4i—C9—C10—C15 | 9.6 (4) |
| O1—Cu1—N1—C17 | −4.4 (2) | C9—C10—C11—C12 | −177.8 (2) |
| O1—Cu1—N1—C21 | −179.6 (2) | C15—C10—C11—C12 | 0.8 (4) |
| O2i—Cu1—N1—C17 | 177.58 (19) | C9—C10—C15—C14 | 176.1 (2) |
| O2i—Cu1—N1—C21 | 2.4 (2) | C11—C10—C15—C14 | −2.6 (4) |
| O3—Cu1—N1—C17 | −92.1 (2) | C10—C11—C12—C13 | 1.7 (4) |
| O3—Cu1—N1—C21 | 92.7 (2) | C11—C12—C13—C14 | −2.5 (4) |
| O4—Cu1—N1—C17 | 85.95 (19) | C11—C12—C13—C16 | 175.5 (3) |
| O4—Cu1—N1—C21 | −89.3 (2) | C12—C13—C14—C15 | 0.8 (4) |
| Cu1—O1—C1—O2 | 2.0 (3) | C16—C13—C14—C15 | −177.3 (3) |
| Cu1—O1—C1—C2 | −177.69 (16) | C13—C14—C15—C10 | 1.8 (4) |
| Cu1i—O2—C1—O1 | −1.3 (4) | N1—C17—C18—C19 | 1.0 (4) |
| Cu1i—O2—C1—C2 | 178.39 (16) | C17—C18—C19—C20 | −2.6 (4) |
| Cu1—O3—C9—O4i | −5.1 (4) | C17—C18—C19—C22 | 178.6 (2) |
| Cu1—O3—C9—C10 | 174.71 (16) | C18—C19—C20—C21 | 2.1 (4) |
| Cu1—N1—C17—C18 | −174.35 (19) | C22—C19—C20—C21 | −179.1 (2) |
| C21—N1—C17—C18 | 1.1 (4) | C18—C19—C22—O5 | 30.9 (4) |
| Cu1—N1—C21—C20 | 173.7 (2) | C18—C19—C22—N2 | −148.8 (3) |
| C17—N1—C21—C20 | −1.6 (4) | C20—C19—C22—O5 | −147.9 (3) |
| O1—C1—C2—C3 | 7.0 (4) | C20—C19—C22—N2 | 32.4 (4) |
| O1—C1—C2—C7 | −172.1 (2) | C19—C20—C21—N1 | 0.1 (4) |
| O2—C1—C2—C3 | −172.7 (2) |
| H··· | ||||
| N2—H2A···O5ii | 0.89 (3) | 2.11 (3) | 2.984 (3) | 169 (3) |
Selected bond lengths (Å)
| Cu1—O1 | 1.9733 (18) |
| Cu1—O2i | 1.9703 (18) |
| Cu1—O3 | 1.9687 (18) |
| Cu1—O4 | 1.9836 (18) |
| Cu1—N1 | 2.161 (2) |
Symmetry code: (i) .
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2 | 0.89 (3) | 2.11 (3) | 2.984 (3) | 169 (3) |
Symmetry code: (ii) .