| Literature DB >> 21577510 |
Hoong-Kun Fun, Jia Hao Goh, A C Vinayaka, B Kalluraya.
Abstract
In the title compound, C(16)H(20)N(2)O(3)S, the thia-zolidine ring is approximately planar [maximum deviation = 0.020 (2) Å] and forms a dihedral angle of 86.20 (11)° with the benzene ring. The mean plane through the propanamide unit forms dihedral angles of 88.54 (12) and 76.36 (12)°, respectively, with the thia-zolidine and benzene rings. In the crystal structure, mol-ecules are linked into chains along the a axis by N-H⋯O inter-actions. These chains are inter-connected into two-dimensional arrays parallel to the ab plane by three different C-H⋯O inter-actions. The crystal structure is further stabilized by weak inter-molecular C-H⋯π and N⋯O [2.713 (2) Å] inter-actions.Entities:
Year: 2009 PMID: 21577510 PMCID: PMC2970021 DOI: 10.1107/S160053680903027X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C16H20N2O3S | |
| Orthorhombic, | Mo |
| Hall symbol: -P 2ac 2ab | Cell parameters from 5195 reflections |
| θ = 2.5–30.0° | |
| µ = 0.21 mm−1 | |
| Plate, colourless | |
| 0.24 × 0.21 × 0.09 mm |
| Bruker SMART APEXII CCD area-detector diffractometer | 3783 independent reflections |
| Radiation source: fine-focus sealed tube | 2927 reflections with |
| graphite | |
| φ and ω scans | θmax = 27.5°, θmin = 2.5° |
| Absorption correction: multi-scan ( | |
| 33569 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3783 reflections | (Δ/σ)max = 0.001 |
| 279 parameters | Δρmax = 0.44 e Å−3 |
| 0 restraints | Δρmin = −0.26 e Å−3 |
| Experimental. The crystal was placed in the cold stream of an Oxford Cyrosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1)K. |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| S1 | 0.07397 (7) | 0.09512 (5) | 0.38158 (2) | 0.02357 (19) | |
| O1 | 0.15979 (17) | 0.01544 (15) | 0.50523 (6) | 0.0235 (4) | |
| O2 | 0.13357 (18) | 0.31521 (14) | 0.40290 (6) | 0.0234 (4) | |
| O3 | −0.03571 (16) | 0.26390 (15) | 0.51261 (6) | 0.0209 (4) | |
| N1 | 0.15610 (19) | 0.17543 (16) | 0.45864 (6) | 0.0154 (4) | |
| N2 | 0.1867 (2) | 0.25414 (17) | 0.49260 (6) | 0.0164 (4) | |
| C1 | 0.1250 (2) | 0.2144 (2) | 0.41525 (8) | 0.0169 (5) | |
| C2 | 0.0969 (3) | −0.0098 (2) | 0.42684 (8) | 0.0193 (5) | |
| C3 | 0.1398 (2) | 0.0567 (2) | 0.46830 (8) | 0.0171 (5) | |
| C4 | 0.0839 (2) | 0.28924 (18) | 0.52017 (8) | 0.0134 (5) | |
| C5 | 0.1292 (2) | 0.35908 (19) | 0.56150 (8) | 0.0154 (5) | |
| C6 | 0.1110 (2) | 0.27896 (19) | 0.60228 (8) | 0.0161 (5) | |
| C7 | 0.2173 (3) | 0.2042 (2) | 0.61513 (8) | 0.0214 (5) | |
| C8 | 0.2021 (3) | 0.1278 (2) | 0.65112 (9) | 0.0231 (6) | |
| C9 | 0.0800 (3) | 0.1236 (2) | 0.67589 (8) | 0.0186 (5) | |
| C10 | −0.0259 (3) | 0.1977 (2) | 0.66277 (8) | 0.0199 (5) | |
| C11 | −0.0112 (3) | 0.2746 (2) | 0.62666 (8) | 0.0191 (5) | |
| C12 | 0.0669 (3) | 0.0436 (2) | 0.71635 (8) | 0.0225 (5) | |
| C13 | 0.1343 (3) | 0.0931 (2) | 0.75930 (8) | 0.0241 (6) | |
| C14 | 0.0692 (4) | 0.2092 (3) | 0.77362 (11) | 0.0338 (7) | |
| C15 | 0.1251 (4) | 0.0031 (3) | 0.79731 (10) | 0.0343 (7) | |
| C16 | 0.0467 (3) | 0.4732 (2) | 0.56402 (9) | 0.0211 (5) | |
| H2A | 0.018 (3) | −0.046 (3) | 0.4334 (10) | 0.037 (8)* | |
| H2B | 0.166 (3) | −0.062 (2) | 0.4197 (9) | 0.029 (7)* | |
| H5 | 0.231 (3) | 0.381 (2) | 0.5594 (8) | 0.014 (6)* | |
| H7 | 0.299 (3) | 0.204 (2) | 0.5973 (9) | 0.027 (7)* | |
| H8 | 0.277 (3) | 0.074 (2) | 0.6603 (9) | 0.023 (7)* | |
| H10 | −0.111 (3) | 0.198 (2) | 0.6778 (8) | 0.016 (6)* | |
| H11 | −0.083 (3) | 0.326 (3) | 0.6170 (9) | 0.028 (7)* | |
| H12A | 0.107 (3) | −0.031 (2) | 0.7094 (9) | 0.023 (7)* | |
| H12B | −0.031 (3) | 0.031 (2) | 0.7228 (8) | 0.015 (6)* | |
| H13 | 0.232 (3) | 0.109 (2) | 0.7529 (10) | 0.034 (8)* | |
| H14A | 0.109 (3) | 0.239 (3) | 0.7992 (11) | 0.037 (8)* | |
| H14B | −0.031 (3) | 0.197 (3) | 0.7814 (10) | 0.038 (8)* | |
| H14C | 0.075 (3) | 0.270 (3) | 0.7520 (11) | 0.046 (9)* | |
| H15A | 0.167 (3) | 0.035 (3) | 0.8251 (11) | 0.042 (9)* | |
| H15B | 0.029 (3) | −0.021 (3) | 0.8030 (10) | 0.039 (8)* | |
| H15C | 0.171 (3) | −0.073 (3) | 0.7888 (10) | 0.036 (8)* | |
| H16A | −0.054 (3) | 0.457 (2) | 0.5618 (9) | 0.030 (8)* | |
| H16B | 0.078 (3) | 0.527 (2) | 0.5401 (9) | 0.024 (7)* | |
| H16C | 0.063 (3) | 0.507 (3) | 0.5937 (10) | 0.032 (8)* | |
| H1N2 | 0.271 (3) | 0.270 (2) | 0.4968 (9) | 0.031 (8)* |
| S1 | 0.0388 (4) | 0.0173 (3) | 0.0146 (3) | −0.0015 (3) | −0.0018 (3) | −0.0025 (2) |
| O1 | 0.0259 (10) | 0.0239 (9) | 0.0207 (9) | 0.0021 (7) | −0.0022 (7) | 0.0052 (7) |
| O2 | 0.0339 (10) | 0.0151 (8) | 0.0213 (9) | −0.0008 (7) | −0.0007 (8) | 0.0013 (7) |
| O3 | 0.0120 (8) | 0.0254 (9) | 0.0254 (10) | −0.0013 (7) | −0.0005 (7) | −0.0031 (7) |
| N1 | 0.0155 (10) | 0.0149 (9) | 0.0157 (10) | −0.0010 (7) | −0.0002 (8) | −0.0018 (8) |
| N2 | 0.0140 (11) | 0.0208 (10) | 0.0144 (10) | −0.0025 (8) | −0.0004 (9) | −0.0047 (8) |
| C1 | 0.0174 (12) | 0.0183 (12) | 0.0150 (12) | 0.0025 (9) | 0.0029 (10) | −0.0019 (9) |
| C2 | 0.0265 (14) | 0.0139 (11) | 0.0174 (12) | 0.0006 (10) | 0.0028 (10) | 0.0025 (9) |
| C3 | 0.0137 (11) | 0.0194 (11) | 0.0182 (12) | 0.0041 (9) | 0.0027 (10) | 0.0002 (9) |
| C4 | 0.0152 (12) | 0.0118 (10) | 0.0132 (11) | 0.0013 (9) | −0.0005 (9) | 0.0044 (8) |
| C5 | 0.0152 (12) | 0.0153 (11) | 0.0158 (12) | −0.0012 (9) | 0.0000 (10) | 0.0026 (9) |
| C6 | 0.0212 (12) | 0.0144 (11) | 0.0128 (11) | −0.0016 (9) | −0.0006 (9) | −0.0016 (9) |
| C7 | 0.0200 (13) | 0.0241 (12) | 0.0200 (13) | 0.0020 (10) | 0.0044 (11) | 0.0015 (10) |
| C8 | 0.0250 (14) | 0.0236 (13) | 0.0208 (13) | 0.0063 (10) | −0.0005 (11) | 0.0027 (10) |
| C9 | 0.0284 (13) | 0.0162 (11) | 0.0113 (11) | −0.0060 (10) | −0.0025 (10) | −0.0024 (9) |
| C10 | 0.0207 (13) | 0.0214 (12) | 0.0176 (12) | −0.0040 (10) | 0.0033 (11) | −0.0030 (10) |
| C11 | 0.0204 (13) | 0.0182 (11) | 0.0186 (13) | 0.0010 (10) | −0.0032 (10) | −0.0004 (9) |
| C12 | 0.0301 (15) | 0.0202 (13) | 0.0171 (13) | −0.0034 (11) | 0.0014 (11) | 0.0002 (10) |
| C13 | 0.0297 (15) | 0.0264 (13) | 0.0163 (13) | −0.0029 (11) | −0.0020 (11) | 0.0050 (10) |
| C14 | 0.051 (2) | 0.0285 (15) | 0.0223 (15) | 0.0008 (14) | −0.0058 (15) | −0.0052 (13) |
| C15 | 0.0472 (19) | 0.0352 (16) | 0.0205 (15) | −0.0025 (14) | −0.0038 (13) | 0.0081 (12) |
| C16 | 0.0266 (14) | 0.0158 (12) | 0.0210 (14) | 0.0009 (10) | 0.0011 (11) | −0.0008 (10) |
| S1—C1 | 1.758 (2) | C8—H8 | 0.99 (3) |
| S1—C2 | 1.811 (2) | C9—C10 | 1.388 (3) |
| O1—C3 | 1.207 (3) | C9—C12 | 1.511 (3) |
| O2—C1 | 1.209 (3) | C10—C11 | 1.391 (3) |
| O3—C4 | 1.220 (3) | C10—H10 | 0.94 (3) |
| N1—N2 | 1.381 (3) | C11—H11 | 0.96 (3) |
| N1—C3 | 1.392 (3) | C12—C13 | 1.538 (4) |
| N1—C1 | 1.394 (3) | C12—H12A | 0.96 (3) |
| N2—C4 | 1.352 (3) | C12—H12B | 0.99 (2) |
| N2—H1N2 | 0.85 (3) | C13—C15 | 1.526 (4) |
| C2—C3 | 1.503 (3) | C13—C14 | 1.527 (4) |
| C2—H2A | 0.90 (3) | C13—H13 | 0.99 (3) |
| C2—H2B | 0.92 (3) | C14—H14A | 0.92 (3) |
| C4—C5 | 1.526 (3) | C14—H14B | 1.01 (3) |
| C5—C6 | 1.525 (3) | C14—H14C | 0.95 (3) |
| C5—C16 | 1.530 (3) | C15—H15A | 0.99 (3) |
| C5—H5 | 1.02 (2) | C15—H15B | 0.98 (3) |
| C6—C11 | 1.392 (3) | C15—H15C | 1.01 (3) |
| C6—C7 | 1.393 (3) | C16—H16A | 1.00 (3) |
| C7—C8 | 1.385 (3) | C16—H16B | 0.98 (3) |
| C7—H7 | 0.95 (3) | C16—H16C | 0.97 (3) |
| C8—C9 | 1.398 (4) | ||
| C1—S1—C2 | 93.19 (11) | C10—C9—C12 | 121.8 (2) |
| N2—N1—C3 | 120.43 (19) | C8—C9—C12 | 120.6 (2) |
| N2—N1—C1 | 120.79 (18) | C9—C10—C11 | 121.5 (2) |
| C3—N1—C1 | 118.35 (19) | C9—C10—H10 | 121.4 (15) |
| C4—N2—N1 | 118.2 (2) | C11—C10—H10 | 117.1 (15) |
| C4—N2—H1N2 | 124.4 (19) | C10—C11—C6 | 120.6 (2) |
| N1—N2—H1N2 | 116.8 (19) | C10—C11—H11 | 122.8 (16) |
| O2—C1—N1 | 124.6 (2) | C6—C11—H11 | 116.6 (16) |
| O2—C1—S1 | 125.66 (19) | C9—C12—C13 | 113.6 (2) |
| N1—C1—S1 | 109.77 (16) | C9—C12—H12A | 109.3 (16) |
| C3—C2—S1 | 107.87 (16) | C13—C12—H12A | 109.3 (16) |
| C3—C2—H2A | 107.0 (19) | C9—C12—H12B | 109.0 (14) |
| S1—C2—H2A | 110.9 (19) | C13—C12—H12B | 108.0 (14) |
| C3—C2—H2B | 108.1 (17) | H12A—C12—H12B | 108 (2) |
| S1—C2—H2B | 110.2 (18) | C15—C13—C14 | 110.7 (2) |
| H2A—C2—H2B | 112 (3) | C15—C13—C12 | 109.9 (2) |
| O1—C3—N1 | 123.1 (2) | C14—C13—C12 | 111.8 (2) |
| O1—C3—C2 | 126.1 (2) | C15—C13—H13 | 108.6 (17) |
| N1—C3—C2 | 110.7 (2) | C14—C13—H13 | 107.3 (16) |
| O3—C4—N2 | 121.7 (2) | C12—C13—H13 | 108.5 (17) |
| O3—C4—C5 | 123.1 (2) | C13—C14—H14A | 111.8 (19) |
| N2—C4—C5 | 115.2 (2) | C13—C14—H14B | 109.8 (18) |
| C6—C5—C4 | 106.87 (17) | H14A—C14—H14B | 106 (3) |
| C6—C5—C16 | 114.2 (2) | C13—C14—H14C | 115 (2) |
| C4—C5—C16 | 109.36 (19) | H14A—C14—H14C | 105 (3) |
| C6—C5—H5 | 107.9 (13) | H14B—C14—H14C | 109 (3) |
| C4—C5—H5 | 110.9 (13) | C13—C15—H15A | 109.8 (18) |
| C16—C5—H5 | 107.7 (13) | C13—C15—H15B | 111.4 (18) |
| C11—C6—C7 | 118.1 (2) | H15A—C15—H15B | 111 (3) |
| C11—C6—C5 | 122.1 (2) | C13—C15—H15C | 111.5 (17) |
| C7—C6—C5 | 119.8 (2) | H15A—C15—H15C | 110 (2) |
| C8—C7—C6 | 121.1 (2) | H15B—C15—H15C | 103 (2) |
| C8—C7—H7 | 121.0 (16) | C5—C16—H16A | 110.8 (16) |
| C6—C7—H7 | 117.8 (16) | C5—C16—H16B | 109.2 (15) |
| C7—C8—C9 | 121.1 (2) | H16A—C16—H16B | 112 (2) |
| C7—C8—H8 | 121.5 (15) | C5—C16—H16C | 107.1 (17) |
| C9—C8—H8 | 117.4 (15) | H16A—C16—H16C | 107 (2) |
| C10—C9—C8 | 117.6 (2) | H16B—C16—H16C | 111 (2) |
| C3—N1—N2—C4 | −77.8 (3) | N2—C4—C5—C16 | 128.2 (2) |
| C1—N1—N2—C4 | 94.6 (2) | C4—C5—C6—C11 | −89.8 (3) |
| N2—N1—C1—O2 | 6.7 (3) | C16—C5—C6—C11 | 31.2 (3) |
| C3—N1—C1—O2 | 179.2 (2) | C4—C5—C6—C7 | 87.9 (2) |
| N2—N1—C1—S1 | −174.03 (16) | C16—C5—C6—C7 | −151.0 (2) |
| C3—N1—C1—S1 | −1.5 (2) | C11—C6—C7—C8 | −0.1 (4) |
| C2—S1—C1—O2 | 178.7 (2) | C5—C6—C7—C8 | −177.9 (2) |
| C2—S1—C1—N1 | −0.56 (18) | C6—C7—C8—C9 | −0.3 (4) |
| C1—S1—C2—C3 | 2.22 (19) | C7—C8—C9—C10 | 0.7 (4) |
| N2—N1—C3—O1 | −4.9 (3) | C7—C8—C9—C12 | −177.3 (2) |
| C1—N1—C3—O1 | −177.5 (2) | C8—C9—C10—C11 | −0.7 (3) |
| N2—N1—C3—C2 | 175.8 (2) | C12—C9—C10—C11 | 177.3 (2) |
| C1—N1—C3—C2 | 3.3 (3) | C9—C10—C11—C6 | 0.3 (4) |
| S1—C2—C3—O1 | 177.4 (2) | C7—C6—C11—C10 | 0.1 (3) |
| S1—C2—C3—N1 | −3.3 (2) | C5—C6—C11—C10 | 177.8 (2) |
| N1—N2—C4—O3 | −8.5 (3) | C10—C9—C12—C13 | −98.4 (3) |
| N1—N2—C4—C5 | 169.96 (18) | C8—C9—C12—C13 | 79.5 (3) |
| O3—C4—C5—C6 | 70.7 (3) | C9—C12—C13—C15 | −175.9 (2) |
| N2—C4—C5—C6 | −107.7 (2) | C9—C12—C13—C14 | 60.8 (3) |
| O3—C4—C5—C16 | −53.4 (3) |
| H··· | ||||
| N2—H1N2···O3i | 0.85 (3) | 1.94 (3) | 2.713 (2) | 151 (2) |
| C2—H2A···O1ii | 0.89 (3) | 2.53 (3) | 3.209 (3) | 133 (3) |
| C2—H2B···O2iii | 0.92 (3) | 2.45 (3) | 3.371 (3) | 174 (2) |
| C5—H5···O1iv | 1.02 (3) | 2.46 (2) | 3.190 (3) | 127.6 (18) |
| C2—H2A···Cg2ii | 0.90 (3) | 2.99 (3) | 3.474 (3) | 116 (2) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H1 | 0.85 (3) | 1.94 (3) | 2.713 (2) | 151 (2) |
| C2—H2 | 0.89 (3) | 2.53 (3) | 3.209 (3) | 133 (3) |
| C2—H2 | 0.92 (3) | 2.45 (3) | 3.371 (3) | 174 (2) |
| C5—H5⋯O1iv | 1.02 (3) | 2.46 (2) | 3.190 (3) | 127.6 (18) |
| C2—H2 | 0.90 (3) | 2.99 (3) | 3.474 (3) | 116 (2) |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) . Cg2 is the centroid of the C6–C11 ring ring.