| Literature DB >> 21579950 |
Wen-Dong Song1, Jian-Bin Yan, Shi-Jie Li, Dong-Liang Miao, Xiao-Fei Li.
Abstract
In the title complex, [Ca(C(8)H(9)N(2)O(4))(2)(H(2)O)(2)](n), theEntities:
Year: 2009 PMID: 21579950 PMCID: PMC2980060 DOI: 10.1107/S1600536809052799
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Ca(C8H9N2O4)2(H2O)2] | |
| Monoclinic, | Mo |
| Hall symbol: -C 2yc | Cell parameters from 3600 reflections |
| θ = 1.4–28° | |
| µ = 0.40 mm−1 | |
| β = 97.864 (2)° | Block, white |
| 0.32 × 0.24 × 0.20 mm | |
| Bruker APEXII area-detector diffractometer | 1718 independent reflections |
| Radiation source: fine-focus sealed tube | 1504 reflections with |
| graphite | |
| φ and ω scan | θmax = 25.2°, θmin = 2.3° |
| Absorption correction: multi-scan ( | |
| 4830 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 1718 reflections | Δρmax = 0.29 e Å−3 |
| 144 parameters | Δρmin = −0.23 e Å−3 |
| 3 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0076 (9) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Ca1 | 0.5000 | 0.07420 (4) | 0.2500 | 0.0189 (2) | |
| O1 | 0.33875 (11) | 0.05035 (10) | 0.36313 (12) | 0.0262 (3) | |
| O1W | 0.55495 (11) | 0.10622 (11) | 0.45862 (12) | 0.0319 (4) | |
| H1W | 0.5121 | 0.1347 | 0.4970 | 0.048* | |
| H2W | 0.5769 | 0.0519 | 0.4904 | 0.048* | |
| O2 | 0.20033 (11) | 0.11430 (10) | 0.43530 (13) | 0.0296 (4) | |
| H1 | 0.1663 | 0.1680 | 0.4316 | 0.044* | |
| O3 | 0.09452 (11) | 0.27478 (11) | 0.42169 (12) | 0.0308 (4) | |
| O4 | 0.09469 (12) | 0.42512 (10) | 0.33195 (13) | 0.0352 (4) | |
| N1 | 0.36595 (12) | 0.22589 (11) | 0.23987 (13) | 0.0201 (4) | |
| N2 | 0.26433 (12) | 0.36382 (11) | 0.21921 (13) | 0.0225 (4) | |
| H2 | 0.2403 | 0.4229 | 0.1951 | 0.027* | |
| C1 | 0.28670 (14) | 0.21777 (14) | 0.30920 (15) | 0.0192 (4) | |
| C2 | 0.22299 (14) | 0.30376 (14) | 0.29747 (16) | 0.0209 (4) | |
| C3 | 0.34950 (14) | 0.31557 (14) | 0.18572 (16) | 0.0215 (4) | |
| C4 | 0.27622 (14) | 0.12212 (14) | 0.37333 (16) | 0.0204 (4) | |
| C5 | 0.40949 (15) | 0.36092 (15) | 0.09774 (17) | 0.0255 (4) | |
| H5A | 0.4753 | 0.3231 | 0.0974 | 0.031* | |
| H5B | 0.4277 | 0.4315 | 0.1189 | 0.031* | |
| C6 | 0.34718 (17) | 0.35929 (17) | −0.02384 (18) | 0.0334 (5) | |
| H6A | 0.3399 | 0.2888 | −0.0508 | 0.040* | |
| H6B | 0.2764 | 0.3865 | −0.0212 | 0.040* | |
| C7 | 0.40144 (19) | 0.42208 (18) | −0.1082 (2) | 0.0382 (6) | |
| H7A | 0.4067 | 0.4924 | −0.0832 | 0.057* | |
| H7B | 0.3606 | 0.4184 | −0.1835 | 0.057* | |
| H7C | 0.4714 | 0.3952 | −0.1113 | 0.057* | |
| C8 | 0.13058 (15) | 0.33836 (15) | 0.35251 (16) | 0.0240 (4) |
| Ca1 | 0.0189 (3) | 0.0157 (3) | 0.0229 (3) | 0.000 | 0.0052 (2) | 0.000 |
| O1 | 0.0267 (7) | 0.0187 (7) | 0.0336 (8) | 0.0026 (6) | 0.0051 (6) | 0.0014 (6) |
| O1W | 0.0345 (8) | 0.0327 (8) | 0.0299 (8) | 0.0035 (6) | 0.0095 (6) | 0.0011 (6) |
| O2 | 0.0303 (8) | 0.0228 (7) | 0.0384 (8) | 0.0041 (6) | 0.0140 (7) | 0.0073 (6) |
| O3 | 0.0295 (8) | 0.0300 (8) | 0.0360 (8) | 0.0045 (6) | 0.0155 (6) | 0.0036 (6) |
| O4 | 0.0385 (9) | 0.0295 (8) | 0.0394 (9) | 0.0182 (6) | 0.0119 (7) | 0.0052 (6) |
| N1 | 0.0188 (8) | 0.0190 (8) | 0.0231 (8) | 0.0000 (6) | 0.0049 (6) | 0.0001 (6) |
| N2 | 0.0250 (8) | 0.0157 (8) | 0.0275 (9) | 0.0045 (6) | 0.0059 (7) | 0.0042 (6) |
| C1 | 0.0185 (9) | 0.0192 (9) | 0.0198 (9) | −0.0003 (7) | 0.0023 (7) | −0.0013 (7) |
| C2 | 0.0219 (9) | 0.0200 (9) | 0.0212 (9) | 0.0015 (7) | 0.0046 (8) | −0.0011 (7) |
| C3 | 0.0207 (9) | 0.0201 (9) | 0.0236 (10) | −0.0007 (7) | 0.0027 (8) | −0.0004 (7) |
| C4 | 0.0203 (9) | 0.0191 (9) | 0.0215 (10) | −0.0007 (7) | 0.0020 (7) | −0.0016 (7) |
| C5 | 0.0230 (10) | 0.0255 (10) | 0.0288 (11) | −0.0018 (8) | 0.0062 (8) | 0.0047 (8) |
| C6 | 0.0311 (11) | 0.0350 (12) | 0.0332 (12) | −0.0093 (9) | 0.0012 (9) | 0.0059 (9) |
| C7 | 0.0419 (13) | 0.0429 (13) | 0.0294 (12) | −0.0077 (10) | 0.0037 (10) | 0.0069 (9) |
| C8 | 0.0235 (10) | 0.0266 (10) | 0.0219 (10) | 0.0022 (8) | 0.0035 (8) | −0.0017 (8) |
| Ca1—O4i | 2.4104 (14) | N1—C1 | 1.380 (2) |
| Ca1—O4ii | 2.4104 (14) | N2—C3 | 1.354 (2) |
| Ca1—O1W | 2.4798 (15) | N2—C2 | 1.362 (2) |
| Ca1—O1Wiii | 2.4799 (15) | N2—H2 | 0.8600 |
| Ca1—N1iii | 2.5982 (15) | C1—C2 | 1.376 (3) |
| Ca1—N1 | 2.5982 (15) | C1—C4 | 1.468 (3) |
| Ca1—O1 | 2.6048 (14) | C2—C8 | 1.484 (3) |
| Ca1—O1iii | 2.6049 (14) | C3—C5 | 1.484 (3) |
| O1—C4 | 1.242 (2) | C5—C6 | 1.530 (3) |
| O1W—H1W | 0.8378 | C5—H5A | 0.9700 |
| O1W—H2W | 0.8287 | C5—H5B | 0.9700 |
| O2—C4 | 1.287 (2) | C6—C7 | 1.517 (3) |
| O2—H1 | 0.8200 | C6—H6A | 0.9700 |
| O3—C8 | 1.284 (2) | C6—H6B | 0.9700 |
| O4—C8 | 1.228 (2) | C7—H7A | 0.9600 |
| O4—Ca1iv | 2.4102 (14) | C7—H7B | 0.9600 |
| N1—C3 | 1.330 (2) | C7—H7C | 0.9600 |
| O4i—Ca1—O4ii | 72.89 (8) | C3—N2—C2 | 108.98 (15) |
| O4i—Ca1—O1W | 125.76 (5) | C3—N2—H2 | 125.5 |
| O4ii—Ca1—O1W | 71.69 (5) | C2—N2—H2 | 125.5 |
| O4i—Ca1—O1Wiii | 71.69 (5) | C2—C1—N1 | 110.21 (16) |
| O4ii—Ca1—O1Wiii | 125.76 (5) | C2—C1—C4 | 130.27 (17) |
| O1W—Ca1—O1Wiii | 160.66 (7) | N1—C1—C4 | 119.30 (15) |
| O4i—Ca1—N1iii | 156.52 (5) | N2—C2—C1 | 104.93 (16) |
| O4ii—Ca1—N1iii | 107.72 (5) | N2—C2—C8 | 121.21 (16) |
| O1W—Ca1—N1iii | 74.52 (5) | C1—C2—C8 | 133.83 (17) |
| O1Wiii—Ca1—N1iii | 90.68 (5) | N1—C3—N2 | 110.39 (16) |
| O4i—Ca1—N1 | 107.72 (5) | N1—C3—C5 | 128.07 (17) |
| O4ii—Ca1—N1 | 156.53 (5) | N2—C3—C5 | 121.51 (17) |
| O1W—Ca1—N1 | 90.68 (5) | O1—C4—O2 | 122.20 (17) |
| O1Wiii—Ca1—N1 | 74.52 (5) | O1—C4—C1 | 118.94 (16) |
| N1iii—Ca1—N1 | 81.19 (7) | O2—C4—C1 | 118.82 (16) |
| O4i—Ca1—O1 | 73.86 (5) | C3—C5—C6 | 112.93 (16) |
| O4ii—Ca1—O1 | 94.96 (5) | C3—C5—H5A | 109.0 |
| O1W—Ca1—O1 | 69.83 (5) | C6—C5—H5A | 109.0 |
| O1Wiii—Ca1—O1 | 112.64 (5) | C3—C5—H5B | 109.0 |
| N1iii—Ca1—O1 | 128.56 (5) | C6—C5—H5B | 109.0 |
| N1—Ca1—O1 | 63.74 (4) | H5A—C5—H5B | 107.8 |
| O4i—Ca1—O1iii | 94.96 (5) | C7—C6—C5 | 111.95 (17) |
| O4ii—Ca1—O1iii | 73.85 (5) | C7—C6—H6A | 109.2 |
| O1W—Ca1—O1iii | 112.64 (5) | C5—C6—H6A | 109.2 |
| O1Wiii—Ca1—O1iii | 69.82 (5) | C7—C6—H6B | 109.2 |
| N1iii—Ca1—O1iii | 63.74 (4) | C5—C6—H6B | 109.2 |
| N1—Ca1—O1iii | 128.56 (5) | H6A—C6—H6B | 107.9 |
| O1—Ca1—O1iii | 166.32 (6) | C6—C7—H7A | 109.5 |
| C4—O1—Ca1 | 121.13 (12) | C6—C7—H7B | 109.5 |
| Ca1—O1W—H1W | 119.1 | H7A—C7—H7B | 109.5 |
| Ca1—O1W—H2W | 109.3 | C6—C7—H7C | 109.5 |
| H1W—O1W—H2W | 109.8 | H7A—C7—H7C | 109.5 |
| C4—O2—H1 | 109.5 | H7B—C7—H7C | 109.5 |
| C8—O4—Ca1iv | 165.57 (15) | O4—C8—O3 | 124.05 (18) |
| C3—N1—C1 | 105.49 (14) | O4—C8—C2 | 119.22 (17) |
| C3—N1—Ca1 | 138.32 (12) | O3—C8—C2 | 116.72 (17) |
| C1—N1—Ca1 | 116.18 (11) |
| H··· | ||||
| N2—H2···O1v | 0.86 | 2.01 | 2.859 (2) | 171 |
| O1W—H2W···O1vi | 0.83 | 2.31 | 3.088 (2) | 156 |
| O1W—H1W···O3vii | 0.84 | 2.12 | 2.947 (2) | 172 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2⋯O1i | 0.86 | 2.01 | 2.859 (2) | 171 |
| O1 | 0.83 | 2.31 | 3.088 (2) | 156 |
| O1 | 0.84 | 2.12 | 2.947 (2) | 172 |
Symmetry codes: (i) ; (ii) ; (iii) .