Literature DB >> 21579099

1-[(E)-(3,4-Dimethyl-isoxazol-5-yl)imino-meth-yl]-2-naphthol.

Hoong-Kun Fun, Madhukar Hemamalini, Abdullah M Asiri, Salman A Khan.   

Abstract

The title Schiff base compound, C(16)H(14)N(2)O(2), has been synthesized by the reaction of 5-amino-3,4-dimethyl-isoxazole and 2-hydr-oxy-1-naphthaldehyde. The dihedral angle between the isoxazole ring and the napthyl ring system is 3.29 (7)°. The mol-ecule adopts an E configuration about the central C=N double bond. Intra-molecular O-H⋯N hydrogen bonding generates an S(6) ring motif. In the crystal structure, π-π inter-actions are observed involving the isoxazole ring and the substituted benzene ring of the naphthyl unit, with centroid-centroid distances of 3.5200 (10) Å.

Entities:  

Year:  2010        PMID: 21579099      PMCID: PMC2979054          DOI: 10.1107/S160053681001216X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related background and the biological activity of isoxazol, see: Howell & Kimmel (2008 ▶); Bartlett & Schleyerbach (1985 ▶); Lamani et al. (2009 ▶); Jayashankar et al. (2009 ▶). For related structures, see: Alvarez-Thon et al. (2006 ▶); Tahir et al. (2008 ▶); Shad et al. (2008 ▶); Fun et al. (2010 ▶). For details of hydrogen-bond motifs, see: Bernstein et al. (1995 ▶). For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986 ▶).

Experimental

Crystal data

C16H14N2O2 M = 266.29 Monoclinic, a = 7.5250 (6) Å b = 15.4643 (12) Å c = 12.3982 (7) Å β = 117.377 (4)° V = 1281.17 (16) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 100 K 0.79 × 0.06 × 0.05 mm

Data collection

Bruker APEX DUO CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.930, T max = 0.996 16577 measured reflections 3704 independent reflections 2843 reflections with I > 2σ(I) R int = 0.041

Refinement

R[F 2 > 2σ(F 2)] = 0.046 wR(F 2) = 0.134 S = 1.05 3704 reflections 237 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.45 e Å−3 Δρmin = −0.23 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXTL and PLATON. Crystal structure: contains datablocks global, I. DOI: 10.1107/S160053681001216X/sj2761sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S160053681001216X/sj2761Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H14N2O2F(000) = 560
Mr = 266.29Dx = 1.381 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 3616 reflections
a = 7.5250 (6) Åθ = 2.6–34.2°
b = 15.4643 (12) ŵ = 0.09 mm1
c = 12.3982 (7) ÅT = 100 K
β = 117.377 (4)°Needle, yellow
V = 1281.17 (16) Å30.79 × 0.06 × 0.05 mm
Z = 4
Bruker APEX DUO CCD area-detector diffractometer3704 independent reflections
Radiation source: fine-focus sealed tube2843 reflections with I > 2σ(I)
graphiteRint = 0.041
φ and ω scansθmax = 30.0°, θmin = 2.3°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −10→10
Tmin = 0.930, Tmax = 0.996k = −21→21
16577 measured reflectionsl = −17→17
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.046Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.134H atoms treated by a mixture of independent and constrained refinement
S = 1.05w = 1/[σ2(Fo2) + (0.0698P)2 + 0.3682P] where P = (Fo2 + 2Fc2)/3
3704 reflections(Δ/σ)max = 0.001
237 parametersΔρmax = 0.45 e Å3
0 restraintsΔρmin = −0.23 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K.
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.20289 (17)1.11942 (6)0.64493 (8)0.0209 (2)
O20.24094 (15)0.97368 (6)0.30327 (8)0.0173 (2)
N10.24292 (17)1.04190 (6)0.47613 (9)0.0152 (2)
N20.21030 (18)0.99921 (7)0.18571 (9)0.0182 (2)
C10.2410 (2)1.04273 (7)0.70239 (11)0.0150 (2)
C20.2479 (2)1.04255 (8)0.81837 (11)0.0179 (3)
C30.2877 (2)0.96778 (8)0.88407 (11)0.0172 (3)
C40.3177 (2)0.88841 (8)0.83642 (11)0.0149 (2)
C50.3597 (2)0.81113 (8)0.90574 (12)0.0184 (3)
C60.3833 (2)0.73399 (8)0.85954 (12)0.0201 (3)
C70.3626 (2)0.73093 (8)0.74058 (12)0.0207 (3)
C80.3253 (2)0.80526 (8)0.67215 (12)0.0177 (3)
C90.30404 (19)0.88660 (7)0.71809 (11)0.0141 (2)
C100.26908 (19)0.96648 (7)0.65075 (11)0.0138 (2)
C110.2611 (2)0.96861 (8)0.53223 (11)0.0148 (2)
C120.2289 (2)1.04637 (7)0.36180 (11)0.0146 (2)
C130.1957 (2)1.11763 (7)0.29069 (11)0.0140 (2)
C140.18303 (19)1.08332 (8)0.18048 (11)0.0151 (2)
C150.1393 (2)1.13268 (9)0.06759 (12)0.0201 (3)
C160.1737 (2)1.20938 (8)0.31960 (12)0.0175 (3)
H2A0.222 (3)1.0979 (12)0.8512 (16)0.029 (5)*
H3A0.290 (3)0.9681 (11)0.9648 (16)0.024 (4)*
H5A0.375 (3)0.8132 (11)0.9894 (16)0.027 (4)*
H6A0.416 (3)0.6822 (12)0.9078 (16)0.027 (4)*
H7A0.376 (3)0.6775 (12)0.7059 (16)0.029 (5)*
H8A0.309 (3)0.8009 (11)0.5908 (15)0.022 (4)*
H11A0.272 (3)0.9140 (11)0.4942 (15)0.026 (4)*
H15A0.091 (3)1.0970 (12)0.0011 (17)0.032 (5)*
H15B0.256 (3)1.1642 (14)0.0772 (18)0.043 (6)*
H15C0.034 (3)1.1763 (14)0.0517 (18)0.043 (6)*
H16A0.202 (3)1.2197 (12)0.4021 (18)0.036 (5)*
H16B0.263 (4)1.2459 (16)0.302 (2)0.053 (6)*
H16C0.041 (4)1.2329 (14)0.266 (2)0.047 (6)*
H1O10.207 (4)1.1091 (15)0.569 (2)0.055 (7)*
U11U22U33U12U13U23
O10.0339 (6)0.0115 (4)0.0197 (4)0.0004 (4)0.0144 (4)0.0013 (3)
O20.0244 (5)0.0130 (4)0.0163 (4)0.0015 (4)0.0109 (4)0.0002 (3)
N10.0175 (5)0.0146 (5)0.0133 (5)0.0000 (4)0.0069 (4)0.0012 (3)
N20.0232 (6)0.0186 (5)0.0150 (5)0.0001 (4)0.0107 (5)0.0001 (4)
C10.0173 (6)0.0123 (5)0.0150 (5)−0.0015 (4)0.0070 (5)0.0004 (4)
C20.0223 (7)0.0155 (5)0.0166 (5)−0.0020 (5)0.0095 (5)−0.0032 (4)
C30.0189 (6)0.0188 (6)0.0143 (5)−0.0033 (5)0.0080 (5)−0.0013 (4)
C40.0135 (6)0.0160 (5)0.0149 (5)−0.0009 (4)0.0061 (5)0.0014 (4)
C50.0183 (6)0.0204 (6)0.0170 (5)−0.0006 (5)0.0085 (5)0.0046 (4)
C60.0193 (6)0.0171 (6)0.0246 (6)0.0001 (5)0.0106 (5)0.0063 (5)
C70.0240 (7)0.0147 (6)0.0261 (6)0.0033 (5)0.0139 (6)0.0029 (5)
C80.0218 (7)0.0146 (5)0.0199 (6)0.0017 (5)0.0123 (5)0.0007 (4)
C90.0141 (6)0.0137 (5)0.0150 (5)0.0004 (4)0.0072 (5)0.0013 (4)
C100.0148 (6)0.0125 (5)0.0144 (5)0.0000 (4)0.0068 (5)0.0003 (4)
C110.0151 (6)0.0139 (5)0.0153 (5)0.0004 (5)0.0069 (5)0.0004 (4)
C120.0158 (6)0.0141 (5)0.0132 (5)−0.0011 (5)0.0062 (5)−0.0014 (4)
C130.0147 (6)0.0136 (5)0.0139 (5)−0.0009 (4)0.0066 (5)−0.0003 (4)
C140.0142 (6)0.0166 (5)0.0152 (5)−0.0005 (5)0.0073 (5)0.0001 (4)
C150.0244 (7)0.0220 (6)0.0153 (6)−0.0011 (6)0.0105 (5)0.0017 (5)
C160.0216 (7)0.0130 (5)0.0175 (6)0.0006 (5)0.0085 (5)0.0001 (4)
O1—C11.3448 (14)C6—H6A0.962 (18)
O1—H1O10.97 (2)C7—C81.3787 (17)
O2—C121.3635 (14)C7—H7A0.957 (19)
O2—N21.4229 (13)C8—C91.4198 (16)
N1—C111.3036 (15)C8—H8A0.962 (17)
N1—C121.3739 (15)C9—C101.4457 (16)
N2—C141.3138 (16)C10—C111.4431 (16)
C1—C101.4033 (16)C11—H11A0.989 (18)
C1—C21.4147 (17)C12—C131.3607 (16)
C2—C31.3659 (17)C13—C141.4274 (16)
C2—H2A1.004 (19)C13—C161.4912 (16)
C3—C41.4245 (17)C14—C151.4920 (17)
C3—H3A0.991 (18)C15—H15A0.916 (19)
C4—C51.4203 (17)C15—H15B0.96 (2)
C4—C91.4231 (16)C15—H15C0.99 (2)
C5—C61.3696 (19)C16—H16A0.96 (2)
C5—H5A0.990 (18)C16—H16B0.98 (3)
C6—C71.4108 (19)C16—H16C0.98 (2)
C1—O1—H1O1105.9 (14)C8—C9—C10123.34 (11)
C12—O2—N2107.29 (9)C4—C9—C10119.09 (11)
C11—N1—C12122.26 (10)C1—C10—C11120.06 (10)
C14—N2—O2105.86 (9)C1—C10—C9118.69 (11)
O1—C1—C10122.65 (11)C11—C10—C9121.25 (10)
O1—C1—C2116.06 (10)N1—C11—C10120.54 (11)
C10—C1—C2121.28 (11)N1—C11—H11A120.0 (10)
C3—C2—C1120.22 (11)C10—C11—H11A119.5 (10)
C3—C2—H2A120.6 (10)C13—C12—O2111.11 (10)
C1—C2—H2A119.2 (10)C13—C12—N1127.84 (11)
C2—C3—C4121.00 (11)O2—C12—N1121.01 (10)
C2—C3—H3A119.7 (10)C12—C13—C14103.35 (10)
C4—C3—H3A119.3 (10)C12—C13—C16128.48 (11)
C5—C4—C9119.85 (11)C14—C13—C16128.16 (11)
C5—C4—C3120.52 (11)N2—C14—C13112.37 (11)
C9—C4—C3119.63 (11)N2—C14—C15120.98 (11)
C6—C5—C4121.03 (12)C13—C14—C15126.63 (11)
C6—C5—H5A119.4 (10)C14—C15—H15A111.2 (12)
C4—C5—H5A119.5 (10)C14—C15—H15B110.3 (12)
C5—C6—C7119.55 (12)H15A—C15—H15B112.1 (18)
C5—C6—H6A120.8 (11)C14—C15—H15C110.3 (12)
C7—C6—H6A119.7 (11)H15A—C15—H15C106.4 (16)
C8—C7—C6120.58 (12)H15B—C15—H15C106.3 (18)
C8—C7—H7A118.5 (11)C13—C16—H16A114.9 (11)
C6—C7—H7A120.9 (11)C13—C16—H16B109.5 (14)
C7—C8—C9121.36 (12)H16A—C16—H16B107.7 (18)
C7—C8—H8A118.6 (10)C13—C16—H16C112.3 (13)
C9—C8—H8A120.0 (10)H16A—C16—H16C108.8 (19)
C8—C9—C4117.57 (11)H16B—C16—H16C102.8 (19)
C12—O2—N2—C140.20 (14)C8—C9—C10—C1177.05 (13)
O1—C1—C2—C3−179.34 (12)C4—C9—C10—C1−2.75 (19)
C10—C1—C2—C31.7 (2)C8—C9—C10—C11−2.4 (2)
C1—C2—C3—C4−1.7 (2)C4—C9—C10—C11177.78 (12)
C2—C3—C4—C5179.74 (13)C12—N1—C11—C10−178.04 (12)
C2—C3—C4—C9−0.7 (2)C1—C10—C11—N15.2 (2)
C9—C4—C5—C6−1.5 (2)C9—C10—C11—N1−175.36 (12)
C3—C4—C5—C6178.15 (13)N2—O2—C12—C13−1.01 (15)
C4—C5—C6—C7−0.9 (2)N2—O2—C12—N1176.88 (12)
C5—C6—C7—C82.1 (2)C11—N1—C12—C13175.02 (14)
C6—C7—C8—C9−0.8 (2)C11—N1—C12—O2−2.5 (2)
C7—C8—C9—C4−1.5 (2)O2—C12—C13—C141.33 (15)
C7—C8—C9—C10178.66 (13)N1—C12—C13—C14−176.38 (13)
C5—C4—C9—C82.64 (19)O2—C12—C13—C16−179.77 (13)
C3—C4—C9—C8−176.96 (12)N1—C12—C13—C162.5 (2)
C5—C4—C9—C10−177.54 (12)O2—N2—C14—C130.64 (15)
C3—C4—C9—C102.85 (19)O2—N2—C14—C15−177.96 (12)
O1—C1—C10—C111.1 (2)C12—C13—C14—N2−1.23 (16)
C2—C1—C10—C11179.96 (13)C16—C13—C14—N2179.86 (13)
O1—C1—C10—C9−178.36 (12)C12—C13—C14—C15177.28 (13)
C2—C1—C10—C90.5 (2)C16—C13—C14—C15−1.6 (2)
D—H···AD—HH···AD···AD—H···A
O1—H1O1···N10.97 (2)1.66 (3)2.5471 (15)150 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1O1⋯N10.97 (2)1.66 (3)2.5471 (15)150 (2)
  9 in total

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7.  4-Bromo-2-((E)-{4-[(3,4-dimethyl-isoxazol-5-yl)sulfamo-yl]phen-yl}iminio-meth-yl)phenolate.

Authors:  M Nawaz Tahir; Zahid H Chohan; Hazoor A Shad; Islam Ullah Khan
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8.  4-Chloro-2-[(E)-({4-[N-(3,4-dimethyl-isoxazol-5-yl)sulfamo-yl]phen-yl}iminio)meth-yl]phenolate.

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  2 in total

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