Literature DB >> 21578481

N'-[(E)-4-Hydr-oxy-3-methoxy-benzyl-idene]pyridine-4-carbohydrazide.

Zahid Shafiq, Muhammad Yaqub, M Nawaz Tahir, Abid Hussain, M Saeed Iqbal.   

Abstract

In the title compound, C(14)H(13)N(3)O(3), the two six-membered rings are oriented at a dihedral angle of 15.17 (11)° and an intra-molecular O-H⋯O hydrogen bond occurs. In the crystal, mol-ecules inter-act by way of N-H⋯O, O-H⋯N and C-H⋯O hydrogen bonds, thereby generating S(5) chain and R(2) (1)(7) ring motifs.

Entities:  

Year:  2009        PMID: 21578481      PMCID: PMC2971391          DOI: 10.1107/S1600536809044134

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Liu & Shi (2007 ▶); Shi et al. (2007 ▶); Shafiq et al. (2009 ▶). For graph-set theory, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

C14H13N3O3 M = 271.27 Monoclinic, a = 14.8543 (10) Å b = 12.4943 (9) Å c = 7.7162 (5) Å β = 116.716 (2)° V = 1279.20 (15) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 296 K 0.32 × 0.14 × 0.10 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.973, T max = 0.984 7060 measured reflections 1613 independent reflections 1431 reflections with I > 2σ(I) R int = 0.028

Refinement

R[F 2 > 2σ(F 2)] = 0.034 wR(F 2) = 0.086 S = 1.04 1613 reflections 183 parameters 2 restraints H-atom parameters constrained Δρmax = 0.16 e Å−3 Δρmin = −0.21 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶) and PLATON. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809044134/hb5177sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809044134/hb5177Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H13N3O3F(000) = 568
Mr = 271.27Dx = 1.409 Mg m3
Monoclinic, CcMo Kα radiation, λ = 0.71073 Å
Hall symbol: C -2ycCell parameters from 1613 reflections
a = 14.8543 (10) Åθ = 2.2–28.7°
b = 12.4943 (9) ŵ = 0.10 mm1
c = 7.7162 (5) ÅT = 296 K
β = 116.716 (2)°Needle, yellow
V = 1279.20 (15) Å30.32 × 0.14 × 0.10 mm
Z = 4
Bruker Kappa APEXII CCD diffractometer1613 independent reflections
Radiation source: fine-focus sealed tube1431 reflections with I > 2σ(I)
graphiteRint = 0.028
Detector resolution: 7.40 pixels mm-1θmax = 28.7°, θmin = 2.2°
ω scansh = −17→19
Absorption correction: multi-scan (SADABS; Bruker, 2005)k = −16→16
Tmin = 0.973, Tmax = 0.984l = −10→5
7060 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.034Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.086H-atom parameters constrained
S = 1.04w = 1/[σ2(Fo2) + (0.0491P)2 + 0.2451P] where P = (Fo2 + 2Fc2)/3
1613 reflections(Δ/σ)max < 0.001
183 parametersΔρmax = 0.16 e Å3
2 restraintsΔρmin = −0.21 e Å3
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.20978 (12)−0.14131 (15)0.1499 (2)0.0464 (5)
O20.74733 (14)0.23723 (14)0.7114 (3)0.0495 (5)
O30.71022 (13)0.02563 (13)0.6995 (3)0.0462 (5)
N1−0.10456 (14)−0.14377 (17)−0.4734 (3)0.0415 (6)
N20.24963 (13)−0.01999 (16)−0.0200 (2)0.0357 (5)
N30.34327 (13)−0.00082 (17)0.1376 (3)0.0371 (5)
C10.08684 (14)−0.10723 (18)−0.1727 (3)0.0302 (6)
C20.03464 (17)−0.2001 (2)−0.1794 (3)0.0400 (7)
C3−0.06004 (17)−0.2154 (2)−0.3320 (4)0.0455 (8)
C4−0.05475 (16)−0.0540 (2)−0.4634 (3)0.0387 (6)
C50.04083 (16)−0.03215 (18)−0.3174 (3)0.0342 (6)
C60.18841 (15)−0.09215 (18)−0.0012 (3)0.0317 (6)
C70.38334 (15)0.08629 (19)0.1254 (3)0.0355 (6)
C80.48092 (15)0.12099 (18)0.2766 (3)0.0322 (6)
C90.54708 (16)0.05029 (18)0.4162 (3)0.0338 (6)
C100.63784 (15)0.08723 (18)0.5602 (3)0.0320 (6)
C110.66190 (15)0.19614 (18)0.5701 (3)0.0318 (6)
C120.59690 (16)0.26504 (19)0.4295 (3)0.0353 (6)
C130.50728 (15)0.22751 (19)0.2826 (3)0.0360 (6)
C140.70271 (18)−0.08742 (19)0.6725 (4)0.0424 (7)
H20.06282−0.25144−0.082490.0480*
H2A0.231750.01414−0.127200.0428*
H2B0.779670.189450.786400.0594*
H3−0.09420−0.27850−0.336360.0546*
H4−0.08569−0.00289−0.559790.0465*
H50.073250.03162−0.316950.0411*
H70.349700.129470.016960.0425*
H90.53013−0.021630.412310.0405*
H120.613410.337100.433420.0424*
H130.464570.274310.187440.0432*
H14A0.70409−0.104980.552540.0636*
H14B0.64062−0.112050.668590.0636*
H14C0.75836−0.121400.778000.0636*
U11U22U33U12U13U23
O10.0372 (9)0.0570 (11)0.0298 (8)−0.0070 (8)0.0015 (7)0.0075 (7)
O20.0341 (8)0.0373 (9)0.0468 (9)−0.0080 (7)−0.0086 (7)0.0022 (8)
O30.0347 (8)0.0346 (9)0.0433 (9)−0.0031 (7)−0.0056 (7)0.0066 (7)
N10.0238 (8)0.0486 (12)0.0369 (10)−0.0013 (8)0.0001 (7)−0.0017 (8)
N20.0252 (9)0.0448 (11)0.0234 (8)−0.0053 (8)−0.0013 (7)0.0011 (7)
N30.0233 (8)0.0481 (11)0.0253 (8)−0.0042 (8)−0.0021 (7)−0.0012 (8)
C10.0226 (9)0.0371 (11)0.0235 (9)−0.0011 (8)0.0037 (8)−0.0041 (8)
C20.0317 (12)0.0392 (12)0.0366 (11)−0.0011 (9)0.0042 (10)0.0068 (10)
C30.0302 (12)0.0441 (14)0.0484 (13)−0.0087 (10)0.0054 (10)0.0025 (11)
C40.0258 (10)0.0455 (13)0.0316 (10)0.0017 (9)0.0011 (8)0.0037 (9)
C50.0260 (10)0.0387 (12)0.0295 (10)−0.0028 (9)0.0050 (8)−0.0021 (9)
C60.0242 (9)0.0376 (12)0.0240 (9)0.0021 (8)0.0027 (8)−0.0028 (8)
C70.0257 (10)0.0421 (12)0.0281 (10)−0.0004 (9)0.0028 (8)0.0005 (9)
C80.0230 (9)0.0403 (12)0.0269 (9)−0.0028 (9)0.0055 (8)−0.0015 (9)
C90.0280 (10)0.0311 (11)0.0327 (10)−0.0059 (8)0.0052 (8)0.0006 (8)
C100.0258 (9)0.0326 (11)0.0291 (9)−0.0010 (8)0.0048 (8)0.0027 (8)
C110.0242 (9)0.0343 (11)0.0296 (10)−0.0037 (8)0.0055 (8)−0.0018 (8)
C120.0323 (11)0.0304 (11)0.0358 (11)−0.0033 (9)0.0087 (9)−0.0007 (9)
C130.0295 (11)0.0387 (12)0.0305 (10)0.0035 (9)0.0053 (9)0.0039 (9)
C140.0352 (12)0.0342 (12)0.0485 (13)0.0013 (10)0.0105 (10)0.0065 (10)
O1—C61.227 (3)C8—C131.382 (3)
O2—C111.349 (3)C8—C91.398 (3)
O3—C101.366 (3)C9—C101.385 (3)
O3—C141.425 (3)C10—C111.400 (3)
O2—H2B0.8200C11—C121.382 (3)
N1—C31.334 (3)C12—C131.386 (3)
N1—C41.327 (3)C2—H20.9300
N2—C61.334 (3)C3—H30.9300
N2—N31.396 (3)C4—H40.9300
N3—C71.264 (3)C5—H50.9300
N2—H2A0.8600C7—H70.9300
C1—C51.381 (3)C9—H90.9300
C1—C21.384 (3)C12—H120.9300
C1—C61.506 (3)C13—H130.9300
C2—C31.383 (4)C14—H14A0.9600
C4—C51.386 (3)C14—H14B0.9600
C7—C81.459 (3)C14—H14C0.9600
C10—O3—C14117.5 (2)O2—C11—C10122.6 (2)
C11—O2—H2B109.00C10—C11—C12119.5 (2)
C3—N1—C4117.5 (2)C11—C12—C13120.5 (2)
N3—N2—C6118.82 (17)C8—C13—C12120.5 (2)
N2—N3—C7113.6 (2)C1—C2—H2120.00
C6—N2—H2A121.00C3—C2—H2120.00
N3—N2—H2A121.00N1—C3—H3119.00
C2—C1—C5118.3 (2)C2—C3—H3119.00
C2—C1—C6117.45 (19)N1—C4—H4118.00
C5—C1—C6124.2 (2)C5—C4—H4118.00
C1—C2—C3119.1 (2)C1—C5—H5121.00
N1—C3—C2123.0 (2)C4—C5—H5121.00
N1—C4—C5123.7 (2)N3—C7—H7119.00
C1—C5—C4118.5 (2)C8—C7—H7119.00
O1—C6—N2123.0 (2)C8—C9—H9120.00
N2—C6—C1116.85 (18)C10—C9—H9120.00
O1—C6—C1120.1 (2)C11—C12—H12120.00
N3—C7—C8121.9 (2)C13—C12—H12120.00
C7—C8—C13118.5 (2)C8—C13—H13120.00
C7—C8—C9122.0 (2)C12—C13—H13120.00
C9—C8—C13119.5 (2)O3—C14—H14A109.00
C8—C9—C10120.1 (2)O3—C14—H14B109.00
O3—C10—C9125.6 (2)O3—C14—H14C109.00
O3—C10—C11114.4 (2)H14A—C14—H14B109.00
C9—C10—C11120.0 (2)H14A—C14—H14C109.00
O2—C11—C12118.0 (2)H14B—C14—H14C110.00
C14—O3—C10—C914.0 (4)N1—C4—C5—C1−0.7 (4)
C14—O3—C10—C11−165.5 (2)N3—C7—C8—C916.8 (4)
C4—N1—C3—C2−0.6 (4)N3—C7—C8—C13−162.1 (2)
C3—N1—C4—C51.3 (4)C7—C8—C9—C10−178.3 (2)
C6—N2—N3—C7−162.0 (2)C13—C8—C9—C100.6 (4)
N3—N2—C6—O11.4 (3)C7—C8—C13—C12176.7 (2)
N3—N2—C6—C1177.92 (19)C9—C8—C13—C12−2.3 (4)
N2—N3—C7—C8179.5 (2)C8—C9—C10—O3−177.3 (2)
C5—C1—C2—C31.5 (4)C8—C9—C10—C112.2 (4)
C6—C1—C2—C3178.3 (2)O3—C10—C11—O2−3.1 (3)
C2—C1—C5—C4−0.8 (3)O3—C10—C11—C12176.2 (2)
C6—C1—C5—C4−177.4 (2)C9—C10—C11—O2177.4 (2)
C2—C1—C6—O1−21.5 (3)C9—C10—C11—C12−3.4 (4)
C2—C1—C6—N2161.9 (2)O2—C11—C12—C13−179.0 (2)
C5—C1—C6—O1155.1 (2)C10—C11—C12—C131.7 (4)
C5—C1—C6—N2−21.5 (3)C11—C12—C13—C81.1 (4)
C1—C2—C3—N1−0.8 (4)
D—H···AD—HH···AD···AD—H···A
O2—H2B···O30.822.252.694 (2)114
N2—H2A···O1i0.862.253.089 (2)164
O2—H2B···N1ii0.821.962.703 (3)150
C5—H5···O1i0.932.553.410 (3)153
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O2—H2B⋯O30.822.252.694 (2)114
N2—H2A⋯O1i0.862.253.089 (2)164
O2—H2B⋯N1ii0.821.962.703 (3)150
C5—H5⋯O1i0.932.553.410 (3)153

Symmetry codes: (i) ; (ii) .

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1.  A short history of SHELX.

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Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

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Authors:  Zahid Shafiq; Muhammad Yaqub; M Nawaz Tahir; Abid Hussain; M Saeed Iqbal
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-10-28

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1.  N'-[(E)-2-Hy-droxy-5-meth-oxy-benzyl-idene]pyridine-4-carbohydrazide monohydrate.

Authors:  M K Prasanna; M Sithambaresan; K Pradeepkumar; M R Prathapachandra Kurup
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-05-15

2.  N'-[(E)-(1-Methyl-1H-pyrrol-2-yl)methyl-idene]pyridine-4-carbohydrazide.

Authors:  Abid Hussain; M Nawaz Tahir; Zahid Shafiq; Muhammad Yaqub; Muhammad Mazhar
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3.  N'-[(E)-1-(5-Chloro-2-hy-droxy-phen-yl)ethyl-idene]pyridine-3-carbohydrazide monohydrate.

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