Literature DB >> 21578635

{2-Eth-oxy-6-[2-(piperidinium-1-yl)ethyl-imino-meth-yl]phenolato}diiodidozinc(II).

Jing-Yan Li1.   

Abstract

The title Schiff base complex, [ZnI(2)(C(16)H(24)N(2)O(2))], is a mononuclear zinc(II) compound. The Zn atom is four-coordinated in a distorted tetra-hedral geometry by one phenolate O atom and one imine N atom of the Schiff base ligand and by two iodide ions. In the crystal structure, mol-ecules are linked through inter-molecular N-H⋯O hydrogen bonds, forming chains running along the a axis.

Entities:  

Year:  2009        PMID: 21578635      PMCID: PMC2971938          DOI: 10.1107/S1600536809048491

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to the applications of Schiff bases, see: Averseng et al. (2001 ▶); Patra et al. (2002 ▶); Chen et al. (2003 ▶); Ruck & Jacobsen (2002 ▶). For the structures of related Schiff base zinc complexes, see: Wei et al. (2007 ▶); Zhu, Yang et al. (2009 ▶); Zhu, Yin, Li et al. (2009 ▶); Zhu, Yin, Yang et al. (2009 ▶).

Experimental

Crystal data

[ZnI2(C16H24N2O2)] M = 595.54 Orthorhombic, a = 13.5934 (10) Å b = 10.2381 (8) Å c = 14.7871 (11) Å V = 2057.9 (3) Å3 Z = 4 Mo Kα radiation μ = 4.20 mm−1 T = 298 K 0.18 × 0.17 × 0.17 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.518, T max = 0.535 11751 measured reflections 4438 independent reflections 3763 reflections with I > 2σ(I) R int = 0.029

Refinement

R[F 2 > 2σ(F 2)] = 0.028 wR(F 2) = 0.068 S = 1.02 4438 reflections 212 parameters 2 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.58 e Å−3 Δρmin = −0.88 e Å−3 Absolute structure: Flack (1983 ▶), 2111 Friedel pairs Flack parameter: 0.02 (2) Data collection: SMART (Bruker, 2002 ▶); cell refinement: SAINT (Bruker, 2002 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809048491/sj2684sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809048491/sj2684Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[ZnI2(C16H24N2O2)]F(000) = 1144
Mr = 595.54Dx = 1.922 Mg m3
Orthorhombic, Pna21Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2c -2nCell parameters from 4921 reflections
a = 13.5934 (10) Åθ = 2.4–27.9°
b = 10.2381 (8) ŵ = 4.20 mm1
c = 14.7871 (11) ÅT = 298 K
V = 2057.9 (3) Å3Block, colourless
Z = 40.18 × 0.17 × 0.17 mm
Bruker SMART CCD area-detector diffractometer4438 independent reflections
Radiation source: fine-focus sealed tube3763 reflections with I > 2σ(I)
graphiteRint = 0.029
ω scansθmax = 27.0°, θmin = 2.4°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −16→17
Tmin = 0.518, Tmax = 0.535k = −9→13
11751 measured reflectionsl = −18→18
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.028H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.068w = 1/[σ2(Fo2) + (0.0339P)2] where P = (Fo2 + 2Fc2)/3
S = 1.02(Δ/σ)max = 0.001
4438 reflectionsΔρmax = 0.58 e Å3
212 parametersΔρmin = −0.88 e Å3
2 restraintsAbsolute structure: Flack (1983), 2111 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: 0.02 (2)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Zn1−0.02523 (3)0.78151 (4)0.73753 (7)0.03660 (10)
I1−0.07635 (3)0.89935 (4)0.881593 (19)0.05811 (13)
I2−0.07707 (3)0.89530 (5)0.590518 (18)0.06408 (15)
N10.1209 (2)0.7453 (3)0.7350 (4)0.0383 (6)
N20.2829 (3)0.9941 (4)0.8503 (2)0.0380 (8)
O1−0.06258 (15)0.5977 (2)0.7346 (4)0.0386 (5)
O2−0.1483 (3)0.3910 (3)0.6564 (2)0.0567 (9)
C10.1005 (3)0.5138 (4)0.7039 (3)0.0405 (10)
C2−0.0040 (3)0.5075 (4)0.7033 (3)0.0373 (9)
C3−0.0463 (4)0.3937 (4)0.6658 (4)0.0491 (11)
C40.0100 (5)0.2871 (5)0.6416 (4)0.0660 (15)
H4−0.02020.21120.62100.079*
C50.1109 (5)0.2932 (5)0.6478 (4)0.0677 (16)
H50.14850.22070.63220.081*
C60.1556 (4)0.4029 (5)0.6762 (3)0.0549 (13)
H60.22400.40630.67780.066*
C70.1560 (3)0.6312 (4)0.7217 (3)0.0415 (12)
H70.22410.62290.72380.050*
C80.1907 (3)0.8546 (4)0.7423 (5)0.0457 (9)
H8A0.16120.93290.71740.055*
H8B0.24950.83490.70780.055*
C90.2174 (3)0.8774 (4)0.8385 (3)0.0417 (10)
H9A0.25060.80070.86190.050*
H9B0.15780.89010.87350.050*
C100.2269 (4)1.1197 (4)0.8443 (4)0.0549 (12)
H10A0.17501.11990.88930.066*
H10B0.19651.12650.78510.066*
C110.2937 (5)1.2366 (5)0.8595 (4)0.0739 (17)
H11A0.34121.24180.81060.089*
H11B0.25471.31590.85860.089*
C120.3470 (5)1.2274 (6)0.9474 (4)0.0751 (17)
H12A0.30021.23200.99680.090*
H12B0.39211.30030.95320.090*
C130.4043 (5)1.0991 (6)0.9531 (5)0.0674 (16)
H13A0.45531.09840.90730.081*
H13B0.43571.09271.01180.081*
C140.3384 (4)0.9850 (5)0.9397 (3)0.0504 (12)
H14A0.29160.98070.98910.060*
H14B0.37720.90550.94050.060*
C15−0.1804 (5)0.4628 (8)0.5756 (4)0.083 (2)
H15A−0.25140.47250.57710.099*
H15B−0.15160.54950.57640.099*
C16−0.1523 (7)0.3969 (10)0.4922 (6)0.126 (4)
H16A−0.08190.39110.48890.189*
H16B−0.17640.44560.44130.189*
H16C−0.18000.31070.49140.189*
H20.333 (3)0.987 (6)0.811 (3)0.080*
U11U22U33U12U13U23
Zn10.02854 (19)0.0357 (2)0.0455 (2)−0.00197 (15)0.0007 (4)−0.0052 (4)
I10.0524 (3)0.0591 (2)0.0628 (3)−0.0002 (2)0.0065 (2)−0.0281 (2)
I20.0628 (4)0.0766 (3)0.0528 (3)0.0076 (2)0.0024 (2)0.0169 (2)
N10.0261 (13)0.0474 (16)0.0414 (15)−0.0071 (11)−0.003 (3)0.002 (3)
N20.0350 (19)0.0452 (19)0.0338 (18)−0.0077 (16)−0.0043 (15)−0.0033 (15)
O10.0316 (12)0.0381 (13)0.0460 (13)−0.0049 (9)0.007 (2)−0.005 (2)
O20.059 (2)0.053 (2)0.058 (2)−0.0245 (15)0.0061 (18)−0.0095 (16)
C10.040 (2)0.045 (2)0.037 (2)0.0128 (19)−0.0005 (16)0.0015 (17)
C20.042 (2)0.034 (2)0.036 (2)0.0008 (18)0.0030 (16)0.0012 (15)
C30.062 (3)0.039 (3)0.046 (3)−0.006 (2)0.007 (2)−0.004 (2)
C40.096 (5)0.038 (3)0.064 (4)−0.002 (3)0.009 (3)−0.006 (2)
C50.092 (5)0.045 (3)0.067 (4)0.028 (3)0.006 (3)−0.009 (3)
C60.058 (3)0.060 (3)0.047 (3)0.025 (2)0.002 (2)0.000 (2)
C70.0279 (18)0.061 (2)0.036 (3)0.0033 (16)−0.0049 (18)−0.004 (2)
C80.0343 (18)0.055 (2)0.048 (2)−0.0151 (16)−0.001 (3)0.001 (4)
C90.037 (2)0.044 (2)0.045 (2)−0.0062 (19)−0.0032 (19)0.0025 (18)
C100.067 (3)0.049 (3)0.049 (3)0.008 (2)−0.011 (3)−0.002 (2)
C110.118 (5)0.046 (3)0.058 (3)−0.005 (3)−0.015 (3)−0.002 (2)
C120.110 (5)0.059 (3)0.056 (3)−0.020 (3)−0.014 (3)−0.007 (3)
C130.058 (4)0.084 (4)0.060 (4)−0.019 (3)−0.014 (3)−0.012 (3)
C140.047 (3)0.059 (3)0.046 (3)0.002 (2)−0.017 (2)0.000 (2)
C150.050 (4)0.122 (6)0.076 (4)−0.021 (4)0.002 (3)−0.030 (4)
C160.073 (5)0.214 (12)0.091 (5)0.007 (6)−0.018 (5)−0.051 (6)
Zn1—O11.950 (2)C8—H8A0.9700
Zn1—N12.021 (3)C8—H8B0.9700
Zn1—I12.5448 (9)C9—H9A0.9700
Zn1—I22.5651 (9)C9—H9B0.9700
N1—C71.277 (5)C10—C111.520 (7)
N1—C81.471 (4)C10—H10A0.9700
N2—C101.498 (6)C10—H10B0.9700
N2—C91.500 (5)C11—C121.491 (8)
N2—C141.524 (5)C11—H11A0.9700
N2—H20.90 (4)C11—H11B0.9700
O1—C21.304 (5)C12—C131.529 (8)
O2—C31.394 (6)C12—H12A0.9700
O2—C151.470 (8)C12—H12B0.9700
C1—C61.421 (6)C13—C141.485 (7)
C1—C21.421 (6)C13—H13A0.9700
C1—C71.444 (6)C13—H13B0.9700
C2—C31.412 (6)C14—H14A0.9700
C3—C41.381 (7)C14—H14B0.9700
C4—C51.376 (9)C15—C161.457 (9)
C4—H40.9300C15—H15A0.9700
C5—C61.345 (7)C15—H15B0.9700
C5—H50.9300C16—H16A0.9600
C6—H60.9300C16—H16B0.9600
C7—H70.9300C16—H16C0.9600
C8—C91.486 (8)
O1—Zn1—N194.50 (10)N2—C9—H9A109.1
O1—Zn1—I1113.89 (16)C8—C9—H9B109.1
N1—Zn1—I1111.78 (16)N2—C9—H9B109.1
O1—Zn1—I2110.37 (17)H9A—C9—H9B107.8
N1—Zn1—I2109.73 (17)N2—C10—C11111.3 (4)
I1—Zn1—I2114.776 (17)N2—C10—H10A109.4
C7—N1—C8117.8 (3)C11—C10—H10A109.4
C7—N1—Zn1122.5 (3)N2—C10—H10B109.4
C8—N1—Zn1119.5 (2)C11—C10—H10B109.4
C10—N2—C9112.0 (3)H10A—C10—H10B108.0
C10—N2—C14110.8 (4)C12—C11—C10111.7 (5)
C9—N2—C14110.3 (3)C12—C11—H11A109.3
C10—N2—H2115 (4)C10—C11—H11A109.3
C9—N2—H2108 (4)C12—C11—H11B109.3
C14—N2—H2101 (4)C10—C11—H11B109.3
C2—O1—Zn1122.1 (2)H11A—C11—H11B107.9
C3—O2—C15111.5 (4)C11—C12—C13110.5 (5)
C6—C1—C2119.3 (4)C11—C12—H12A109.6
C6—C1—C7116.2 (4)C13—C12—H12A109.6
C2—C1—C7124.1 (4)C11—C12—H12B109.6
O1—C2—C3118.4 (4)C13—C12—H12B109.6
O1—C2—C1125.1 (4)H12A—C12—H12B108.1
C3—C2—C1116.5 (4)C14—C13—C12111.2 (5)
C4—C3—O2120.7 (4)C14—C13—H13A109.4
C4—C3—C2121.9 (5)C12—C13—H13A109.4
O2—C3—C2117.4 (4)C14—C13—H13B109.4
C5—C4—C3120.0 (5)C12—C13—H13B109.4
C5—C4—H4120.0H13A—C13—H13B108.0
C3—C4—H4120.0C13—C14—N2111.5 (4)
C6—C5—C4120.6 (5)C13—C14—H14A109.3
C6—C5—H5119.7N2—C14—H14A109.3
C4—C5—H5119.7C13—C14—H14B109.3
C5—C6—C1121.3 (5)N2—C14—H14B109.3
C5—C6—H6119.4H14A—C14—H14B108.0
C1—C6—H6119.4C16—C15—O2112.3 (7)
N1—C7—C1126.5 (4)C16—C15—H15A109.1
N1—C7—H7116.8O2—C15—H15A109.1
C1—C7—H7116.8C16—C15—H15B109.1
N1—C8—C9110.4 (5)O2—C15—H15B109.1
N1—C8—H8A109.6H15A—C15—H15B107.9
C9—C8—H8A109.6C15—C16—H16A109.5
N1—C8—H8B109.6C15—C16—H16B109.5
C9—C8—H8B109.6H16A—C16—H16B109.5
H8A—C8—H8B108.1C15—C16—H16C109.5
C8—C9—N2112.5 (3)H16A—C16—H16C109.5
C8—C9—H9A109.1H16B—C16—H16C109.5
D—H···AD—HH···AD···AD—H···A
N2—H2···O2i0.90 (4)2.61 (5)3.237 (5)127 (4)
N2—H2···O1i0.90 (4)2.01 (5)2.867 (5)159 (5)
Table 1

Selected bond lengths (Å)

Zn1—O11.950 (2)
Zn1—N12.021 (3)
Zn1—I12.5448 (9)
Zn1—I22.5651 (9)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N2—H2⋯O2i 0.90 (4)2.61 (5)3.237 (5)127 (4)
N2—H2⋯O1i 0.90 (4)2.01 (5)2.867 (5)159 (5)

Symmetry code: (i) .

  8 in total

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Authors:  F Averseng; P G Lacroix; I Malfant; N Périssé; C Lepetit; K Nakatani
Journal:  Inorg Chem       Date:  2001-07-16       Impact factor: 5.165

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Asymmetric catalysis of hetero-ene reactions with tridentate Schiff base chromium(III) complexes.

Authors:  Rebecca T Ruck; Eric N Jacobsen
Journal:  J Am Chem Soc       Date:  2002-03-27       Impact factor: 15.419

4.  Spontaneous reduction of a low-spin Fe(III) complex of a neutral pentadentate N(5) Schiff base ligand to the corresponding Fe(II) species in acetonitrile.

Authors:  Apurba K Patra; Marilyn M Olmstead; Pradip K Mascharak
Journal:  Inorg Chem       Date:  2002-10-21       Impact factor: 5.165

5.  {4-Bromo-2-[2-(piperidin-1-ium-1yl)ethyl-iminometh-yl]phenolato}diiodido-zinc(II).

Authors:  Xue-Wen Zhu; Zhi-Gang Yin; Gang-Sen Li; Xu-Zhao Yang; Chun-Xia Zhang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-09-19

6.  {4-Bromo-2-[3-(diethyl-ammonio)propyl-imino-meth-yl]phenolato}diiodidozinc(II) methanol solvate.

Authors:  Xue-Wen Zhu; Zhi-Gang Yin; Xu-Zhao Yang; Gang-Sen Li; Chun-Xia Zhang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-10-03

7.  Diiodido{4-nitro-2-[2-(piperidin-1-yl)ethyl-imino-meth-yl]phenolato}zinc(II).

Authors:  Xue-Wen Zhu; Xu-Zhao Yang; Chun-Xia Zhang; Gang-Sen Li; Zhi-Gang Yin
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-10-10

8.  Aggregate manganese Schiff base moieties by terephthalate or acetate: dinuclear manganese and trinuclear mixed metal Mn2/Na complexes.

Authors:  Changneng Chen; Deguang Huang; Xiaofeng Zhang; Feng Chen; Hongping Zhu; Qiutian Liu; Cunxi Zhang; Daizheng Liao; Licun Li; Licheng Sun
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  8 in total

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