Literature DB >> 21589113

(E)-2,2-Dimethyl-5-(3-phenyl-allyl-idene)-1,3-dioxane-4,6-dione.

Wu-Lan Zeng1.   

Abstract

The title compound, C(15)H(14)O(4), was prepared by the reaction of 2,2-dimethyl-1,3-dioxane-4,6-dione and (Z)-3-phenyl-acryl-aldehyde in ethanol. The dioxane ring is in a sofa conformation with the C atom bonded to the two methyl groups forming the flap. With the exception of the flap atom and the methyl group C atoms, all other non-H atoms are essentially planar, with an r.m.s. deviation of 0.067 (1) Å. The crystal structure is stabilized by weak inter-molecular C-H⋯O hydrogen bonds.

Entities:  

Year:  2010        PMID: 21589113      PMCID: PMC3009221          DOI: 10.1107/S1600536810042534

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to Meldrum’s acid, 2,2-dimethyl-1,3-dioxane-4,6-dione, see: Kuhn et al. (2003 ▶); Casadesus et al. (2006 ▶). For a related structure, see: Zeng & Jian (2009 ▶).

Experimental

Crystal data

C15H14O4 M = 258.26 Triclinic, a = 6.9171 (14) Å b = 7.0961 (14) Å c = 13.732 (3) Å α = 94.79 (3)° β = 90.79 (3)° γ = 98.31 (3)° V = 664.4 (2) Å3 Z = 2 Mo Kα radiation μ = 0.09 mm−1 T = 293 K 0.20 × 0.15 × 0.10 mm

Data collection

Bruker SMART CCD area-detector diffractometer 6475 measured reflections 3006 independent reflections 2319 reflections with I > 2σ(I) R int = 0.045

Refinement

R[F 2 > 2σ(F 2)] = 0.055 wR(F 2) = 0.170 S = 1.25 3006 reflections 172 parameters H-atom parameters constrained Δρmax = 0.33 e Å−3 Δρmin = −0.30 e Å−3 Data collection: SMART (Bruker, 1997 ▶); cell refinement: SAINT (Bruker, 1997 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810042534/lh5147sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810042534/lh5147Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H14O4Z = 2
Mr = 258.26F(000) = 272
Triclinic, P1Dx = 1.291 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 6.9171 (14) ÅCell parameters from 2319 reflections
b = 7.0961 (14) Åθ = 3.2–27.5°
c = 13.732 (3) ŵ = 0.09 mm1
α = 94.79 (3)°T = 293 K
β = 90.79 (3)°Block, yellow
γ = 98.31 (3)°0.20 × 0.15 × 0.10 mm
V = 664.4 (2) Å3
Bruker SMART CCD area-detector diffractometer2319 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.045
graphiteθmax = 27.5°, θmin = 3.2°
phi and ω scansh = −8→8
6475 measured reflectionsk = −9→9
3006 independent reflectionsl = −17→17
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.055Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.170H-atom parameters constrained
S = 1.25w = 1/[σ2(Fo2) + (0.1P)2] where P = (Fo2 + 2Fc2)/3
3006 reflections(Δ/σ)max < 0.001
172 parametersΔρmax = 0.33 e Å3
0 restraintsΔρmin = −0.30 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O20.11039 (12)0.49034 (12)0.88464 (7)0.0556 (3)
O10.26632 (13)0.73340 (13)0.79292 (7)0.0576 (3)
C100.40643 (17)0.44465 (17)0.80181 (9)0.0489 (3)
C90.53406 (18)0.32290 (19)0.77683 (9)0.0533 (3)
H9A0.50870.20470.80240.064*
O40.52765 (15)0.70212 (16)0.70801 (9)0.0790 (4)
O30.21672 (17)0.21587 (14)0.89068 (9)0.0782 (4)
C110.24288 (19)0.37290 (18)0.86240 (9)0.0534 (3)
C80.70169 (18)0.3474 (2)0.71739 (10)0.0546 (3)
H8A0.73610.46170.68910.066*
C120.41250 (18)0.63399 (19)0.76415 (10)0.0537 (3)
C15−0.0208 (2)0.7761 (2)0.87670 (11)0.0621 (4)
H15A−0.09510.72130.81910.093*
H15B0.00820.91210.87450.093*
H15C−0.09530.74810.93350.093*
C70.80960 (19)0.2062 (2)0.70229 (9)0.0569 (3)
H7A0.76730.09440.73150.068*
C50.98573 (19)0.2077 (2)0.64538 (9)0.0553 (3)
C130.16573 (17)0.69346 (17)0.88135 (9)0.0503 (3)
C41.06834 (19)0.3651 (2)0.59900 (11)0.0648 (4)
H4A1.01240.47690.60490.078*
C61.0760 (2)0.0447 (2)0.63695 (11)0.0726 (4)
H6A1.0236−0.06200.66800.087*
C140.2935 (2)0.7718 (2)0.96872 (12)0.0717 (4)
H14A0.41060.71370.96730.108*
H14B0.22480.74431.02730.108*
H14C0.32710.90770.96750.108*
C31.2336 (2)0.3567 (3)0.54389 (13)0.0784 (5)
H3A1.28690.46240.51230.094*
C21.3187 (2)0.1942 (3)0.53569 (14)0.0887 (6)
H2A1.42860.18860.49790.106*
C11.2416 (3)0.0393 (3)0.58337 (14)0.0903 (6)
H1A1.3018−0.07000.57940.108*
U11U22U33U12U13U23
O20.0584 (5)0.0430 (5)0.0644 (6)0.0006 (4)0.0176 (4)0.0074 (4)
O10.0619 (5)0.0547 (5)0.0613 (6)0.0155 (4)0.0176 (4)0.0212 (4)
C100.0530 (6)0.0473 (7)0.0473 (6)0.0056 (5)0.0066 (5)0.0115 (5)
C90.0593 (7)0.0520 (7)0.0500 (7)0.0098 (5)0.0023 (5)0.0097 (5)
O40.0782 (7)0.0716 (7)0.0972 (8)0.0208 (5)0.0424 (6)0.0429 (6)
O30.1022 (8)0.0478 (6)0.0891 (8)0.0118 (5)0.0430 (6)0.0245 (5)
C110.0652 (7)0.0439 (7)0.0509 (7)0.0035 (5)0.0112 (6)0.0082 (5)
C80.0546 (7)0.0582 (7)0.0525 (7)0.0106 (5)0.0027 (5)0.0086 (5)
C120.0531 (6)0.0531 (7)0.0577 (7)0.0087 (5)0.0127 (5)0.0180 (6)
C150.0607 (7)0.0590 (8)0.0679 (9)0.0116 (6)0.0127 (6)0.0063 (6)
C70.0603 (7)0.0609 (8)0.0519 (7)0.0148 (6)0.0021 (6)0.0098 (6)
C50.0556 (7)0.0672 (8)0.0463 (7)0.0197 (6)−0.0027 (5)0.0050 (6)
C130.0567 (6)0.0423 (6)0.0510 (7)0.0014 (5)0.0104 (5)0.0081 (5)
C40.0582 (7)0.0763 (10)0.0642 (8)0.0191 (7)0.0015 (6)0.0144 (7)
C60.0820 (9)0.0768 (10)0.0665 (9)0.0339 (8)0.0090 (8)0.0096 (8)
C140.0797 (9)0.0637 (9)0.0678 (9)0.0026 (7)−0.0088 (7)−0.0016 (7)
C30.0592 (8)0.1082 (14)0.0715 (10)0.0144 (8)0.0096 (7)0.0236 (9)
C20.0677 (9)0.1327 (18)0.0731 (10)0.0386 (10)0.0170 (8)0.0082 (11)
C10.0914 (12)0.1067 (14)0.0844 (12)0.0537 (11)0.0177 (10)0.0057 (10)
O2—C111.3468 (15)C7—C51.456 (2)
O2—C131.4415 (14)C7—H7A0.9300
O1—C121.3590 (15)C5—C41.387 (2)
O1—C131.4362 (15)C5—C61.389 (2)
C10—C91.3501 (17)C13—C141.4992 (19)
C10—C111.4702 (18)C4—C31.385 (2)
C10—C121.4746 (17)C4—H4A0.9300
C9—C81.4256 (19)C6—C11.374 (2)
C9—H9A0.9300C6—H6A0.9300
O4—C121.1959 (16)C14—H14A0.9600
O3—C111.2004 (15)C14—H14B0.9600
C8—C71.3375 (18)C14—H14C0.9600
C8—H8A0.9300C3—C21.366 (2)
C15—C131.4955 (17)C3—H3A0.9300
C15—H15A0.9600C2—C11.372 (3)
C15—H15B0.9600C2—H2A0.9300
C15—H15C0.9600C1—H1A0.9300
C11—O2—C13119.15 (10)C6—C5—C7118.85 (14)
C12—O1—C13119.85 (9)O1—C13—O2110.44 (10)
C9—C10—C11116.66 (11)O1—C13—C15106.78 (10)
C9—C10—C12123.71 (12)O2—C13—C15106.17 (10)
C11—C10—C12119.36 (11)O1—C13—C14110.25 (11)
C10—C9—C8130.02 (12)O2—C13—C14109.54 (10)
C10—C9—H9A115.0C15—C13—C14113.55 (13)
C8—C9—H9A115.0C3—C4—C5120.42 (15)
O3—C11—O2118.16 (12)C3—C4—H4A119.8
O3—C11—C10124.58 (13)C5—C4—H4A119.8
O2—C11—C10117.22 (10)C1—C6—C5120.81 (17)
C7—C8—C9120.10 (13)C1—C6—H6A119.6
C7—C8—H8A119.9C5—C6—H6A119.6
C9—C8—H8A119.9C13—C14—H14A109.5
O4—C12—O1118.08 (11)C13—C14—H14B109.5
O4—C12—C10126.04 (12)H14A—C14—H14B109.5
O1—C12—C10115.79 (11)C13—C14—H14C109.5
C13—C15—H15A109.5H14A—C14—H14C109.5
C13—C15—H15B109.5H14B—C14—H14C109.5
H15A—C15—H15B109.5C2—C3—C4120.37 (17)
C13—C15—H15C109.5C2—C3—H3A119.8
H15A—C15—H15C109.5C4—C3—H3A119.8
H15B—C15—H15C109.5C3—C2—C1119.80 (16)
C8—C7—C5127.42 (13)C3—C2—H2A120.1
C8—C7—H7A116.3C1—C2—H2A120.1
C5—C7—H7A116.3C2—C1—C6120.36 (16)
C4—C5—C6118.21 (13)C2—C1—H1A119.8
C4—C5—C7122.93 (13)C6—C1—H1A119.8
D—H···AD—HH···AD···AD—H···A
C15—H15B···O3i0.962.413.2991 (19)155
C15—H15C···O3ii0.962.573.486 (2)159
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C15—H15B⋯O3i0.962.413.2991 (19)155
C15—H15C⋯O3ii0.962.573.486 (2)159

Symmetry codes: (i) ; (ii) .

  3 in total

1.  Synthesis of 5-alkylidene-1,3-dioxane-4,6-diones, an easily accessible family of axially chiral alkenes: preparation in non-racemic form and platinum binding studies.

Authors:  Meritxell Casadesus; Michael P Coogan; Li-Ling Ooi
Journal:  Org Biomol Chem       Date:  2006-09-14       Impact factor: 3.876

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  5-(2-Fluoro-benzyl-idene)-2,2-dimethyl-1,3-dioxane-4,6-dione.

Authors:  Wu-Lan Zeng; Fang-Fang Jian
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-09-30
  3 in total
  1 in total

1.  2,2-Dimethyl-5-[(5-methyl-furan-2-yl)methyl-idene]-1,3-dioxane-4,6-dione.

Authors:  Wu-Lan Zeng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-01-22
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.