| Literature DB >> 21577832 |
Jerry P Jasinski, Ray J Butcher, H S Yathirajan, L Mallesha, K N Mohana.
Abstract
The title compound, C(12)H(15)F(2)N(2)O(+)·C(6)Entities:
Year: 2009 PMID: 21577832 PMCID: PMC2970333 DOI: 10.1107/S1600536809035363
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C12H15F2N2O+·C6H2N3O7− | |
| Monoclinic, | Cu |
| Hall symbol: -P 2yn | Cell parameters from 4482 reflections |
| θ = 4.9–74.1° | |
| µ = 1.20 mm−1 | |
| β = 92.671 (6)° | Chunk, pale yellow |
| 0.49 × 0.45 × 0.38 mm | |
| Oxford Diffraction Xcalibur diffractometer with a Ruby (Gemini Cu) detector | 3910 independent reflections |
| Radiation source: Enhance (Cu) X-ray Source | 3475 reflections with |
| graphite | |
| Detector resolution: 10.5081 pixels mm-1 | θmax = 74.1°, θmin = 4.9° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 7628 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3910 reflections | (Δ/σ)max < 0.001 |
| 303 parameters | Δρmax = 0.30 e Å−3 |
| 0 restraints | Δρmin = −0.30 e Å−3 |
| Experimental. CrysAlisPro, Oxford Diffraction Ltd., Version 1.171.33.34d (release 27-02-2009 CrysAlis171 .NET) (compiled Feb 27 2009,15:38:38) Empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| F1A | 0.4117 (3) | 0.58470 (13) | 0.70084 (6) | 0.0326 (4) | 0.631 (4) |
| F1B | −0.0826 (5) | 0.4942 (2) | 0.55863 (11) | 0.0326 (4) | 0.37 |
| F2 | −0.2362 (2) | 0.41781 (9) | 0.74432 (5) | 0.0519 (4) | |
| O1 | 0.3558 (2) | 0.44002 (9) | 0.54602 (6) | 0.0389 (3) | |
| H1A | 0.4171 | 0.4159 | 0.5185 | 0.058* | |
| N1 | 0.3999 (3) | 0.54236 (11) | 0.54919 (6) | 0.0309 (3) | |
| N2 | 0.5153 (2) | 0.88427 (9) | 0.55578 (5) | 0.0199 (3) | |
| H2A | 0.5653 | 0.8665 | 0.5217 | 0.024* | |
| H2B | 0.5390 | 0.9509 | 0.5604 | 0.024* | |
| C1 | 0.1660 (3) | 0.53694 (11) | 0.62919 (6) | 0.0214 (3) | |
| C2 | 0.2218 (3) | 0.53902 (12) | 0.68601 (7) | 0.0249 (3) | |
| H2 | 0.3559 | 0.5695 | 0.6982 | 0.030* | 0.369 (4) |
| C3 | 0.0908 (3) | 0.49879 (12) | 0.72519 (7) | 0.0299 (4) | |
| H3A | 0.1331 | 0.4999 | 0.7637 | 0.036* | |
| C4 | −0.1038 (3) | 0.45693 (13) | 0.70620 (8) | 0.0332 (4) | |
| C5 | −0.1698 (3) | 0.45176 (13) | 0.65070 (8) | 0.0321 (4) | |
| H5A | −0.3052 | 0.4218 | 0.6390 | 0.039* | |
| C6 | −0.0313 (3) | 0.49188 (12) | 0.61243 (7) | 0.0261 (3) | |
| H6 | −0.0723 | 0.4885 | 0.5739 | 0.031* | 0.631 (4) |
| C7 | 0.3115 (3) | 0.58538 (12) | 0.58942 (6) | 0.0221 (3) | |
| C8 | 0.3575 (2) | 0.69523 (11) | 0.59583 (6) | 0.0206 (3) | |
| H8A | 0.3034 | 0.7169 | 0.6325 | 0.025* | |
| C9 | 0.2332 (3) | 0.75380 (13) | 0.55000 (7) | 0.0273 (4) | |
| H9A | 0.2810 | 0.7318 | 0.5132 | 0.033* | |
| H9B | 0.0738 | 0.7405 | 0.5516 | 0.033* | |
| C10 | 0.2742 (3) | 0.86397 (13) | 0.55644 (8) | 0.0286 (4) | |
| H10A | 0.1964 | 0.9001 | 0.5256 | 0.034* | |
| H10B | 0.2167 | 0.8873 | 0.5920 | 0.034* | |
| C11 | 0.6425 (3) | 0.82942 (11) | 0.60045 (7) | 0.0237 (3) | |
| H11A | 0.5979 | 0.8524 | 0.6374 | 0.028* | |
| H11B | 0.8012 | 0.8432 | 0.5977 | 0.028* | |
| C12 | 0.6024 (3) | 0.71882 (11) | 0.59519 (7) | 0.0230 (3) | |
| H12A | 0.6812 | 0.6842 | 0.6264 | 0.028* | |
| H12B | 0.6612 | 0.6947 | 0.5600 | 0.028* | |
| O1B | 0.48994 (19) | 0.91121 (8) | 0.44016 (5) | 0.0257 (3) | |
| O21B | 0.7803 (2) | 0.77495 (10) | 0.47615 (5) | 0.0327 (3) | |
| O22B | 1.01401 (18) | 0.74502 (9) | 0.41357 (5) | 0.0262 (3) | |
| O41B | 0.7531 (3) | 0.69201 (10) | 0.22667 (5) | 0.0441 (4) | |
| O42B | 0.4368 (3) | 0.74855 (11) | 0.19724 (5) | 0.0426 (4) | |
| O61B | −0.0029 (2) | 0.93104 (14) | 0.31606 (7) | 0.0563 (5) | |
| O62B | 0.1039 (2) | 0.97294 (11) | 0.39934 (8) | 0.0495 (4) | |
| N2B | 0.8313 (2) | 0.77022 (10) | 0.42725 (5) | 0.0207 (3) | |
| N4B | 0.5790 (3) | 0.73383 (11) | 0.23427 (6) | 0.0322 (4) | |
| N6B | 0.1329 (2) | 0.93020 (11) | 0.35541 (7) | 0.0327 (4) | |
| C1B | 0.4929 (2) | 0.86302 (11) | 0.39577 (6) | 0.0197 (3) | |
| C2B | 0.6651 (2) | 0.79351 (11) | 0.38377 (6) | 0.0191 (3) | |
| C3B | 0.6944 (3) | 0.75188 (11) | 0.33251 (6) | 0.0219 (3) | |
| H3BA | 0.8174 | 0.7107 | 0.3266 | 0.026* | |
| C4B | 0.5401 (3) | 0.77135 (12) | 0.28969 (6) | 0.0249 (3) | |
| C5B | 0.3567 (3) | 0.82860 (12) | 0.29821 (7) | 0.0268 (4) | |
| H5BA | 0.2481 | 0.8377 | 0.2690 | 0.032* | |
| C6B | 0.3327 (3) | 0.87222 (11) | 0.34922 (7) | 0.0241 (3) |
| F1A | 0.0361 (8) | 0.0377 (8) | 0.0237 (7) | −0.0054 (6) | −0.0035 (5) | −0.0009 (6) |
| F1B | 0.0361 (8) | 0.0377 (8) | 0.0237 (7) | −0.0054 (6) | −0.0035 (5) | −0.0009 (6) |
| F2 | 0.0645 (8) | 0.0379 (6) | 0.0566 (8) | −0.0099 (6) | 0.0386 (6) | 0.0049 (5) |
| O1 | 0.0580 (8) | 0.0199 (6) | 0.0410 (7) | −0.0143 (6) | 0.0276 (6) | −0.0133 (5) |
| N1 | 0.0441 (8) | 0.0187 (7) | 0.0313 (7) | −0.0118 (6) | 0.0156 (6) | −0.0087 (6) |
| N2 | 0.0251 (6) | 0.0157 (6) | 0.0189 (6) | 0.0022 (5) | 0.0021 (5) | 0.0010 (5) |
| C1 | 0.0263 (8) | 0.0147 (7) | 0.0235 (8) | 0.0008 (6) | 0.0064 (6) | −0.0009 (6) |
| C2 | 0.0305 (8) | 0.0187 (7) | 0.0259 (8) | 0.0016 (6) | 0.0055 (6) | −0.0020 (6) |
| C3 | 0.0466 (10) | 0.0196 (8) | 0.0243 (8) | 0.0054 (7) | 0.0104 (7) | 0.0013 (6) |
| C4 | 0.0428 (10) | 0.0196 (8) | 0.0390 (10) | 0.0010 (7) | 0.0229 (8) | 0.0028 (7) |
| C5 | 0.0254 (8) | 0.0229 (8) | 0.0488 (11) | −0.0027 (7) | 0.0106 (7) | −0.0037 (7) |
| C6 | 0.0282 (8) | 0.0209 (8) | 0.0293 (8) | 0.0014 (6) | 0.0040 (7) | −0.0026 (6) |
| C7 | 0.0259 (7) | 0.0205 (8) | 0.0203 (7) | −0.0040 (6) | 0.0032 (6) | −0.0024 (6) |
| C8 | 0.0265 (8) | 0.0183 (7) | 0.0175 (7) | −0.0021 (6) | 0.0050 (6) | −0.0023 (6) |
| C9 | 0.0177 (7) | 0.0291 (9) | 0.0347 (9) | 0.0012 (6) | −0.0053 (6) | −0.0001 (7) |
| C10 | 0.0221 (8) | 0.0257 (8) | 0.0378 (9) | 0.0083 (6) | 0.0004 (7) | 0.0045 (7) |
| C11 | 0.0259 (8) | 0.0185 (7) | 0.0259 (8) | −0.0014 (6) | −0.0080 (6) | 0.0022 (6) |
| C12 | 0.0238 (8) | 0.0164 (7) | 0.0277 (8) | −0.0002 (6) | −0.0077 (6) | 0.0025 (6) |
| O1B | 0.0371 (6) | 0.0189 (5) | 0.0212 (5) | 0.0061 (5) | 0.0042 (5) | 0.0021 (4) |
| O21B | 0.0333 (6) | 0.0485 (8) | 0.0163 (5) | 0.0145 (6) | 0.0005 (5) | −0.0001 (5) |
| O22B | 0.0217 (5) | 0.0304 (6) | 0.0266 (6) | 0.0043 (5) | 0.0024 (4) | −0.0007 (5) |
| O41B | 0.0744 (10) | 0.0356 (7) | 0.0227 (6) | 0.0128 (7) | 0.0063 (6) | −0.0007 (5) |
| O42B | 0.0634 (9) | 0.0424 (8) | 0.0206 (6) | −0.0175 (7) | −0.0141 (6) | 0.0038 (5) |
| O61B | 0.0276 (7) | 0.0832 (12) | 0.0574 (9) | 0.0107 (7) | −0.0072 (6) | 0.0273 (9) |
| O62B | 0.0328 (7) | 0.0341 (8) | 0.0810 (11) | 0.0108 (6) | −0.0029 (7) | −0.0201 (8) |
| N2B | 0.0226 (6) | 0.0205 (6) | 0.0189 (6) | 0.0015 (5) | 0.0000 (5) | −0.0005 (5) |
| N4B | 0.0563 (10) | 0.0218 (7) | 0.0179 (7) | −0.0109 (7) | −0.0037 (6) | 0.0033 (5) |
| N6B | 0.0222 (7) | 0.0233 (7) | 0.0525 (10) | −0.0023 (6) | −0.0006 (6) | 0.0156 (7) |
| C1B | 0.0239 (7) | 0.0154 (7) | 0.0202 (7) | −0.0029 (6) | 0.0028 (6) | 0.0041 (5) |
| C2B | 0.0213 (7) | 0.0175 (7) | 0.0183 (7) | −0.0028 (6) | −0.0002 (5) | 0.0029 (6) |
| C3B | 0.0289 (8) | 0.0169 (7) | 0.0199 (7) | −0.0026 (6) | 0.0015 (6) | 0.0008 (6) |
| C4B | 0.0373 (9) | 0.0192 (7) | 0.0180 (7) | −0.0076 (7) | −0.0019 (6) | 0.0020 (6) |
| C5B | 0.0300 (8) | 0.0243 (8) | 0.0253 (8) | −0.0098 (6) | −0.0086 (6) | 0.0092 (6) |
| C6B | 0.0216 (7) | 0.0188 (7) | 0.0318 (8) | −0.0019 (6) | −0.0007 (6) | 0.0081 (6) |
| F2—C4 | 1.3563 (19) | C10—H10A | 0.9900 |
| O1—N1 | 1.4126 (18) | C10—H10B | 0.9900 |
| O1—H1A | 0.8400 | C11—C12 | 1.521 (2) |
| N1—C7 | 1.270 (2) | C11—H11A | 0.9900 |
| N2—C11 | 1.4926 (19) | C11—H11B | 0.9900 |
| N2—C10 | 1.495 (2) | C12—H12A | 0.9900 |
| N2—H2A | 0.9200 | C12—H12B | 0.9900 |
| N2—H2B | 0.9200 | O1B—C1B | 1.2517 (19) |
| C1—C6 | 1.391 (2) | O21B—N2B | 1.2317 (17) |
| C1—C2 | 1.393 (2) | O22B—N2B | 1.2240 (17) |
| C1—C7 | 1.486 (2) | O41B—N4B | 1.224 (2) |
| C2—C3 | 1.375 (2) | O42B—N4B | 1.229 (2) |
| C2—H2 | 0.9500 | O61B—N6B | 1.227 (2) |
| C3—C4 | 1.373 (3) | O62B—N6B | 1.224 (2) |
| C3—H3A | 0.9500 | N2B—C2B | 1.4556 (19) |
| C4—C5 | 1.377 (3) | N4B—C4B | 1.456 (2) |
| C5—C6 | 1.388 (2) | N6B—C6B | 1.462 (2) |
| C5—H5A | 0.9500 | C1B—C2B | 1.448 (2) |
| C6—H6 | 0.9500 | C1B—C6B | 1.456 (2) |
| C7—C8 | 1.520 (2) | C2B—C3B | 1.374 (2) |
| C8—C12 | 1.526 (2) | C3B—C4B | 1.387 (2) |
| C8—C9 | 1.529 (2) | C3B—H3BA | 0.9500 |
| C8—H8A | 1.0000 | C4B—C5B | 1.383 (3) |
| C9—C10 | 1.519 (2) | C5B—C6B | 1.375 (2) |
| C9—H9A | 0.9900 | C5B—H5BA | 0.9500 |
| C9—H9B | 0.9900 | ||
| N1—O1—H1A | 109.5 | C9—C10—H10A | 109.7 |
| C7—N1—O1 | 113.86 (13) | N2—C10—H10B | 109.7 |
| C11—N2—C10 | 112.24 (12) | C9—C10—H10B | 109.7 |
| C11—N2—H2A | 109.2 | H10A—C10—H10B | 108.2 |
| C10—N2—H2A | 109.2 | N2—C11—C12 | 110.71 (12) |
| C11—N2—H2B | 109.2 | N2—C11—H11A | 109.5 |
| C10—N2—H2B | 109.2 | C12—C11—H11A | 109.5 |
| H2A—N2—H2B | 107.9 | N2—C11—H11B | 109.5 |
| C6—C1—C2 | 117.46 (14) | C12—C11—H11B | 109.5 |
| C6—C1—C7 | 122.72 (14) | H11A—C11—H11B | 108.1 |
| C2—C1—C7 | 119.78 (14) | C11—C12—C8 | 111.00 (13) |
| C3—C2—C1 | 122.77 (16) | C11—C12—H12A | 109.4 |
| C3—C2—H2 | 118.6 | C8—C12—H12A | 109.4 |
| C1—C2—H2 | 118.6 | C11—C12—H12B | 109.4 |
| C4—C3—C2 | 117.09 (16) | C8—C12—H12B | 109.4 |
| C4—C3—H3A | 121.5 | H12A—C12—H12B | 108.0 |
| C2—C3—H3A | 121.5 | O22B—N2B—O21B | 122.94 (13) |
| F2—C4—C3 | 117.88 (17) | O22B—N2B—C2B | 118.59 (12) |
| F2—C4—C5 | 118.62 (17) | O21B—N2B—C2B | 118.45 (13) |
| C3—C4—C5 | 123.49 (16) | O41B—N4B—O42B | 123.60 (15) |
| C4—C5—C6 | 117.61 (16) | O41B—N4B—C4B | 118.50 (14) |
| C4—C5—H5A | 121.2 | O42B—N4B—C4B | 117.86 (17) |
| C6—C5—H5A | 121.2 | O62B—N6B—O61B | 122.80 (16) |
| C5—C6—C1 | 121.57 (16) | O62B—N6B—C6B | 119.71 (15) |
| C5—C6—H6 | 119.2 | O61B—N6B—C6B | 117.45 (17) |
| C1—C6—H6 | 119.2 | O1B—C1B—C2B | 123.23 (14) |
| N1—C7—C1 | 125.05 (14) | O1B—C1B—C6B | 125.10 (14) |
| N1—C7—C8 | 116.31 (14) | C2B—C1B—C6B | 111.61 (13) |
| C1—C7—C8 | 118.63 (13) | C3B—C2B—C1B | 124.81 (14) |
| C7—C8—C12 | 112.30 (13) | C3B—C2B—N2B | 116.10 (14) |
| C7—C8—C9 | 110.57 (13) | C1B—C2B—N2B | 118.93 (13) |
| C12—C8—C9 | 109.62 (12) | C2B—C3B—C4B | 118.41 (15) |
| C7—C8—H8A | 108.1 | C2B—C3B—H3BA | 120.8 |
| C12—C8—H8A | 108.1 | C4B—C3B—H3BA | 120.8 |
| C9—C8—H8A | 108.1 | C5B—C4B—C3B | 121.40 (15) |
| C10—C9—C8 | 111.22 (13) | C5B—C4B—N4B | 119.87 (15) |
| C10—C9—H9A | 109.4 | C3B—C4B—N4B | 118.67 (16) |
| C8—C9—H9A | 109.4 | C6B—C5B—C4B | 119.53 (15) |
| C10—C9—H9B | 109.4 | C6B—C5B—H5BA | 120.2 |
| C8—C9—H9B | 109.4 | C4B—C5B—H5BA | 120.2 |
| H9A—C9—H9B | 108.0 | C5B—C6B—C1B | 123.61 (15) |
| N2—C10—C9 | 109.65 (13) | C5B—C6B—N6B | 116.43 (15) |
| N2—C10—H10A | 109.7 | C1B—C6B—N6B | 119.96 (15) |
| C6—C1—C2—C3 | 0.0 (2) | O1B—C1B—C2B—C3B | −168.56 (15) |
| C7—C1—C2—C3 | 177.62 (15) | C6B—C1B—C2B—C3B | 9.0 (2) |
| C1—C2—C3—C4 | −1.2 (2) | O1B—C1B—C2B—N2B | 6.6 (2) |
| C2—C3—C4—F2 | −179.33 (15) | C6B—C1B—C2B—N2B | −175.87 (12) |
| C2—C3—C4—C5 | 1.4 (3) | O22B—N2B—C2B—C3B | 23.4 (2) |
| F2—C4—C5—C6 | −179.72 (15) | O21B—N2B—C2B—C3B | −155.21 (14) |
| C3—C4—C5—C6 | −0.5 (3) | O22B—N2B—C2B—C1B | −152.14 (14) |
| C4—C5—C6—C1 | −0.8 (2) | O21B—N2B—C2B—C1B | 29.2 (2) |
| C2—C1—C6—C5 | 1.0 (2) | C1B—C2B—C3B—C4B | −5.0 (2) |
| C7—C1—C6—C5 | −176.53 (15) | N2B—C2B—C3B—C4B | 179.71 (13) |
| O1—N1—C7—C1 | −2.5 (3) | C2B—C3B—C4B—C5B | −2.0 (2) |
| O1—N1—C7—C8 | 178.61 (14) | C2B—C3B—C4B—N4B | 175.31 (14) |
| C6—C1—C7—N1 | −60.4 (2) | O41B—N4B—C4B—C5B | 172.66 (15) |
| C2—C1—C7—N1 | 122.18 (19) | O42B—N4B—C4B—C5B | −5.3 (2) |
| C6—C1—C7—C8 | 118.49 (17) | O41B—N4B—C4B—C3B | −4.7 (2) |
| C2—C1—C7—C8 | −59.0 (2) | O42B—N4B—C4B—C3B | 177.34 (15) |
| N1—C7—C8—C12 | −50.3 (2) | C3B—C4B—C5B—C6B | 4.0 (2) |
| C1—C7—C8—C12 | 130.70 (15) | N4B—C4B—C5B—C6B | −173.31 (14) |
| N1—C7—C8—C9 | 72.44 (19) | C4B—C5B—C6B—C1B | 0.9 (2) |
| C1—C7—C8—C9 | −106.51 (16) | C4B—C5B—C6B—N6B | −178.96 (14) |
| C7—C8—C9—C10 | 178.97 (13) | O1B—C1B—C6B—C5B | 170.67 (15) |
| C12—C8—C9—C10 | −56.69 (17) | C2B—C1B—C6B—C5B | −6.8 (2) |
| C11—N2—C10—C9 | −57.77 (17) | O1B—C1B—C6B—N6B | −9.5 (2) |
| C8—C9—C10—N2 | 57.41 (18) | C2B—C1B—C6B—N6B | 173.04 (13) |
| C10—N2—C11—C12 | 57.29 (17) | O62B—N6B—C6B—C5B | −178.23 (15) |
| N2—C11—C12—C8 | −55.84 (17) | O61B—N6B—C6B—C5B | 3.9 (2) |
| C7—C8—C12—C11 | 178.80 (13) | O62B—N6B—C6B—C1B | 1.9 (2) |
| C9—C8—C12—C11 | 55.48 (17) | O61B—N6B—C6B—C1B | −175.92 (15) |
| H··· | ||||
| O1—H1A···N1i | 0.84 | 2.09 | 2.7980 (18) | 141 |
| N2—H2A···O1B | 0.92 | 2.08 | 2.8005 (16) | 134 |
| N2—H2A···O21B | 0.92 | 2.14 | 2.9580 (17) | 148 |
| N2—H2B···O1Bii | 0.92 | 1.87 | 2.7705 (17) | 164 |
| N2—H2B···O62Bii | 0.92 | 2.56 | 3.170 (2) | 125 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1—H1 | 0.84 | 2.09 | 2.7980 (18) | 141 |
| N2—H2 | 0.92 | 2.08 | 2.8005 (16) | 134 |
| N2—H2 | 0.92 | 2.14 | 2.9580 (17) | 148 |
| N2—H2 | 0.92 | 1.87 | 2.7705 (17) | 164 |
| N2—H2 | 0.92 | 2.56 | 3.170 (2) | 125 |
Symmetry codes: (i) ; (ii) .