Literature DB >> 21577492

Ethyl 2-acetoxy-methyl-1-phenyl-sulfonyl-1H-indole-3-carboxyl-ate.

B Gunasekaran, Radhakrishnan Sureshbabu, A K Mohanakrishnan, G Chakkaravarthi, V Manivannan.   

Abstract

In the title compound, C(20)H(19)NO(6)S, the phenyl ring of the phenyl-sulfonyl group makes a dihedral angle of 83.35 (5)° with the indole ring system. The mol-ecular structure exhibits a number of short intramolecular C-H⋯O contacts.

Entities:  

Year:  2009        PMID: 21577492      PMCID: PMC2970018          DOI: 10.1107/S1600536809029985

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of indole derivatives, see: Andreani et al. (2001 ▶); Quetin-Leclercq (1994 ▶); Mukhopadhyay et al. (1981 ▶); Singh et al. (2000 ▶). For related structures, see: Chakkaravarthi et al. (2007 ▶, 2008 ▶); Gunasekaran et al. (2009 ▶); For graph-set notation, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

C20H19NO6S M = 401.42 Orthorhombic, a = 18.9097 (6) Å b = 7.9737 (2) Å c = 24.7877 (7) Å V = 3737.50 (18) Å3 Z = 8 Mo Kα radiation μ = 0.21 mm−1 T = 295 K 0.25 × 0.20 × 0.20 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.949, T max = 0.959 28247 measured reflections 5788 independent reflections 3533 reflections with I > 2σ(I) R int = 0.031

Refinement

R[F 2 > 2σ(F 2)] = 0.051 wR(F 2) = 0.153 S = 1.01 5788 reflections 255 parameters H-atom parameters constrained Δρmax = 0.28 e Å−3 Δρmin = −0.35 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809029985/gk2226sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809029985/gk2226Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C20H19NO6SF(000) = 1680
Mr = 401.42Dx = 1.427 Mg m3
Orthorhombic, PbcaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2abCell parameters from 6552 reflections
a = 18.9097 (6) Åθ = 2.7–27.1°
b = 7.9737 (2) ŵ = 0.21 mm1
c = 24.7877 (7) ÅT = 295 K
V = 3737.50 (18) Å3Block, colourless
Z = 80.25 × 0.20 × 0.20 mm
Bruker APEXII CCD diffractometer5788 independent reflections
Radiation source: fine-focus sealed tube3533 reflections with I > 2σ(I)
graphiteRint = 0.031
Detector resolution: 0 pixels mm-1θmax = 31.6°, θmin = 2.0°
ω and φ scansh = −27→20
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)k = −11→8
Tmin = 0.949, Tmax = 0.959l = −36→36
28247 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.051Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.153H-atom parameters constrained
S = 1.01w = 1/[σ2(Fo2) + (0.0697P)2 + 1.0858P] where P = (Fo2 + 2Fc2)/3
5788 reflections(Δ/σ)max < 0.001
255 parametersΔρmax = 0.28 e Å3
0 restraintsΔρmin = −0.35 e Å3
xyzUiso*/Ueq
C10.68111 (9)0.2922 (2)0.13401 (7)0.0409 (4)
C20.66359 (10)0.3751 (3)0.18121 (7)0.0483 (4)
H20.61650.38790.19130.058*
C30.71703 (11)0.4382 (3)0.21287 (8)0.0541 (5)
H30.70620.49610.24440.065*
C40.78647 (11)0.4159 (3)0.19792 (9)0.0558 (5)
H40.82240.45670.21990.067*
C50.80341 (11)0.3345 (3)0.15112 (9)0.0552 (5)
H50.85060.32140.14130.066*
C60.75066 (11)0.2720 (3)0.11846 (8)0.0483 (4)
H60.76170.21700.08650.058*
C70.60056 (10)0.4924 (2)0.03978 (6)0.0428 (4)
C80.66197 (11)0.4833 (3)0.00964 (7)0.0541 (5)
H80.68950.38680.00880.065*
C90.68026 (13)0.6250 (3)−0.01919 (8)0.0637 (6)
H90.72140.6239−0.03970.076*
C100.63942 (13)0.7675 (3)−0.01839 (8)0.0625 (6)
H100.65350.8601−0.03850.075*
C110.57857 (12)0.7761 (3)0.01128 (7)0.0525 (5)
H110.55110.87290.01140.063*
C120.55875 (10)0.6358 (2)0.04138 (6)0.0430 (4)
C130.49985 (10)0.6010 (2)0.07648 (6)0.0413 (4)
C140.50652 (9)0.4409 (2)0.09542 (6)0.0404 (4)
C150.44401 (11)0.7252 (3)0.08755 (7)0.0494 (5)
C160.33828 (13)0.7855 (4)0.13344 (13)0.0798 (8)
H16A0.32270.83830.10020.096*
H16B0.35330.87270.15820.096*
C170.28112 (17)0.6899 (4)0.15688 (15)0.1048 (11)
H17A0.26380.61060.13090.157*
H17B0.24360.76440.16710.157*
H17C0.29800.63130.18820.157*
C180.45723 (10)0.3415 (3)0.12950 (7)0.0471 (4)
H18A0.40950.38490.12620.057*
H18B0.45730.22500.11820.057*
C190.45014 (11)0.2553 (3)0.22036 (8)0.0537 (5)
C200.48239 (14)0.2728 (4)0.27501 (9)0.0738 (7)
H20A0.45770.20200.30010.111*
H20B0.47890.38740.28660.111*
H20C0.53120.24030.27350.111*
N10.56802 (8)0.37097 (19)0.07288 (6)0.0430 (3)
O10.56787 (8)0.10956 (18)0.12805 (7)0.0627 (4)
O20.64517 (9)0.13016 (19)0.04850 (6)0.0663 (4)
O30.44205 (10)0.8600 (2)0.06699 (8)0.0857 (6)
O40.39629 (8)0.6727 (2)0.12256 (6)0.0641 (4)
O50.48159 (7)0.35577 (17)0.18482 (5)0.0502 (3)
O60.40269 (11)0.1643 (3)0.20854 (7)0.0913 (6)
S10.61405 (3)0.20341 (6)0.09468 (2)0.04808 (15)
U11U22U33U12U13U23
C10.0439 (9)0.0323 (10)0.0464 (8)0.0010 (7)−0.0041 (7)0.0052 (7)
C20.0451 (10)0.0481 (12)0.0516 (9)0.0023 (9)0.0002 (8)0.0016 (8)
C30.0603 (12)0.0513 (13)0.0508 (10)−0.0009 (10)−0.0050 (9)−0.0036 (9)
C40.0541 (12)0.0504 (13)0.0631 (11)−0.0073 (9)−0.0138 (9)0.0040 (9)
C50.0441 (10)0.0516 (13)0.0698 (12)−0.0025 (9)0.0003 (9)0.0104 (10)
C60.0504 (10)0.0405 (12)0.0541 (9)0.0027 (8)0.0030 (8)0.0026 (8)
C70.0524 (10)0.0400 (11)0.0359 (7)−0.0054 (8)−0.0076 (7)−0.0011 (7)
C80.0604 (12)0.0565 (13)0.0454 (9)−0.0010 (10)0.0001 (8)−0.0051 (9)
C90.0693 (14)0.0767 (17)0.0452 (10)−0.0160 (12)0.0061 (9)−0.0028 (10)
C100.0826 (15)0.0570 (15)0.0478 (10)−0.0208 (12)−0.0024 (10)0.0080 (9)
C110.0728 (13)0.0397 (12)0.0450 (9)−0.0074 (9)−0.0084 (9)0.0026 (8)
C120.0551 (10)0.0391 (11)0.0348 (7)−0.0054 (8)−0.0106 (7)−0.0035 (7)
C130.0491 (10)0.0381 (10)0.0366 (7)−0.0010 (8)−0.0114 (7)−0.0010 (7)
C140.0420 (9)0.0404 (11)0.0389 (8)−0.0030 (7)−0.0104 (7)0.0011 (7)
C150.0537 (11)0.0463 (13)0.0482 (9)0.0039 (9)−0.0120 (8)0.0002 (8)
C160.0608 (14)0.0734 (19)0.1053 (19)0.0158 (13)0.0051 (14)−0.0091 (15)
C170.084 (2)0.087 (2)0.144 (3)0.0024 (17)0.0415 (19)−0.005 (2)
C180.0438 (9)0.0490 (12)0.0485 (9)−0.0053 (8)−0.0103 (7)0.0048 (8)
C190.0529 (11)0.0520 (13)0.0562 (10)−0.0001 (10)0.0086 (9)0.0086 (9)
C200.0858 (17)0.0825 (18)0.0532 (11)−0.0016 (14)0.0033 (11)0.0150 (12)
N10.0468 (8)0.0363 (9)0.0459 (7)−0.0002 (6)−0.0071 (6)0.0036 (6)
O10.0561 (8)0.0387 (9)0.0933 (11)−0.0070 (6)−0.0113 (8)0.0163 (7)
O20.0780 (10)0.0467 (9)0.0743 (9)0.0083 (7)−0.0106 (8)−0.0226 (7)
O30.0919 (13)0.0588 (12)0.1065 (14)0.0256 (10)0.0135 (11)0.0258 (10)
O40.0605 (9)0.0577 (10)0.0741 (9)0.0132 (7)0.0094 (7)0.0034 (8)
O50.0545 (8)0.0515 (8)0.0445 (6)−0.0091 (6)−0.0059 (6)0.0084 (6)
O60.0865 (12)0.1080 (15)0.0792 (11)−0.0482 (12)0.0073 (10)0.0148 (11)
S10.0519 (3)0.0306 (3)0.0617 (3)0.0003 (2)−0.0106 (2)−0.0024 (2)
C1—C61.380 (3)C13—C151.473 (3)
C1—C21.384 (3)C14—N11.406 (2)
C1—S11.7492 (18)C14—C181.487 (3)
C2—C31.375 (3)C15—O31.190 (3)
C2—H20.9300C15—O41.320 (2)
C3—C41.376 (3)C16—O41.444 (3)
C3—H30.9300C16—C171.445 (4)
C4—C51.367 (3)C16—H16A0.9700
C4—H40.9300C16—H16B0.9700
C5—C61.378 (3)C17—H17A0.9600
C5—H50.9300C17—H17B0.9600
C6—H60.9300C17—H17C0.9600
C7—C81.383 (3)C18—O51.451 (2)
C7—C121.390 (3)C18—H18A0.9700
C7—N11.411 (2)C18—H18B0.9700
C8—C91.380 (3)C19—O61.190 (3)
C8—H80.9300C19—O51.331 (2)
C9—C101.374 (4)C19—C201.492 (3)
C9—H90.9300C20—H20A0.9600
C10—C111.367 (3)C20—H20B0.9600
C10—H100.9300C20—H20C0.9600
C11—C121.396 (3)N1—S11.6838 (16)
C11—H110.9300O1—S11.4166 (15)
C12—C131.440 (3)O2—S11.4136 (16)
C13—C141.366 (3)
C6—C1—C2121.34 (17)O3—C15—O4123.1 (2)
C6—C1—S1119.21 (14)O3—C15—C13123.3 (2)
C2—C1—S1119.39 (14)O4—C15—C13113.56 (17)
C3—C2—C1118.77 (18)O4—C16—C17108.4 (2)
C3—C2—H2120.6O4—C16—H16A110.0
C1—C2—H2120.6C17—C16—H16A110.0
C2—C3—C4120.01 (19)O4—C16—H16B110.0
C2—C3—H3120.0C17—C16—H16B110.0
C4—C3—H3120.0H16A—C16—H16B108.4
C5—C4—C3120.91 (19)C16—C17—H17A109.5
C5—C4—H4119.5C16—C17—H17B109.5
C3—C4—H4119.5H17A—C17—H17B109.5
C4—C5—C6120.04 (19)C16—C17—H17C109.5
C4—C5—H5120.0H17A—C17—H17C109.5
C6—C5—H5120.0H17B—C17—H17C109.5
C5—C6—C1118.91 (18)O5—C18—C14107.23 (14)
C5—C6—H6120.5O5—C18—H18A110.3
C1—C6—H6120.5C14—C18—H18A110.3
C8—C7—C12122.42 (18)O5—C18—H18B110.3
C8—C7—N1130.14 (18)C14—C18—H18B110.3
C12—C7—N1107.44 (16)H18A—C18—H18B108.5
C9—C8—C7116.6 (2)O6—C19—O5122.7 (2)
C9—C8—H8121.7O6—C19—C20126.1 (2)
C7—C8—H8121.7O5—C19—C20111.21 (19)
C10—C9—C8121.9 (2)C19—C20—H20A109.5
C10—C9—H9119.1C19—C20—H20B109.5
C8—C9—H9119.1H20A—C20—H20B109.5
C11—C10—C9121.5 (2)C19—C20—H20C109.5
C11—C10—H10119.3H20A—C20—H20C109.5
C9—C10—H10119.3H20B—C20—H20C109.5
C10—C11—C12118.2 (2)C14—N1—C7108.65 (15)
C10—C11—H11120.9C14—N1—S1127.94 (12)
C12—C11—H11120.9C7—N1—S1120.40 (13)
C7—C12—C11119.40 (18)C15—O4—C16116.42 (19)
C7—C12—C13107.40 (16)C19—O5—C18115.88 (15)
C11—C12—C13133.20 (19)O2—S1—O1120.74 (10)
C14—C13—C12108.42 (16)O2—S1—N1106.44 (9)
C14—C13—C15129.06 (18)O1—S1—N1106.73 (8)
C12—C13—C15122.52 (17)O2—S1—C1108.47 (9)
C13—C14—N1108.09 (16)O1—S1—C1109.60 (9)
C13—C14—C18129.45 (17)N1—S1—C1103.45 (8)
N1—C14—C18122.22 (16)
C6—C1—C2—C30.1 (3)C12—C13—C15—O4−177.13 (16)
S1—C1—C2—C3177.33 (15)C13—C14—C18—O5−97.2 (2)
C1—C2—C3—C4−1.1 (3)N1—C14—C18—O589.02 (19)
C2—C3—C4—C51.5 (3)C13—C14—N1—C70.88 (18)
C3—C4—C5—C6−0.7 (3)C18—C14—N1—C7175.80 (14)
C4—C5—C6—C1−0.4 (3)C13—C14—N1—S1160.98 (12)
C2—C1—C6—C50.7 (3)C18—C14—N1—S1−24.1 (2)
S1—C1—C6—C5−176.58 (15)C8—C7—N1—C14179.48 (17)
C12—C7—C8—C90.1 (3)C12—C7—N1—C14−0.79 (18)
N1—C7—C8—C9179.75 (17)C8—C7—N1—S117.6 (2)
C7—C8—C9—C10−0.5 (3)C12—C7—N1—S1−162.66 (12)
C8—C9—C10—C110.2 (3)O3—C15—O4—C162.7 (3)
C9—C10—C11—C120.4 (3)C13—C15—O4—C16−177.34 (18)
C8—C7—C12—C110.6 (3)C17—C16—O4—C15160.9 (2)
N1—C7—C12—C11−179.20 (14)O6—C19—O5—C18−3.3 (3)
C8—C7—C12—C13−179.84 (16)C20—C19—O5—C18176.40 (18)
N1—C7—C12—C130.40 (18)C14—C18—O5—C19−170.56 (16)
C10—C11—C12—C7−0.8 (3)C14—N1—S1—O2150.20 (15)
C10—C11—C12—C13179.76 (18)C7—N1—S1—O2−51.75 (15)
C7—C12—C13—C140.13 (18)C14—N1—S1—O120.02 (18)
C11—C12—C13—C14179.66 (18)C7—N1—S1—O1178.06 (13)
C7—C12—C13—C15−179.64 (15)C14—N1—S1—C1−95.58 (16)
C11—C12—C13—C15−0.1 (3)C7—N1—S1—C162.47 (14)
C12—C13—C14—N1−0.62 (18)C6—C1—S1—O2−4.02 (18)
C15—C13—C14—N1179.14 (16)C2—C1—S1—O2178.69 (15)
C12—C13—C14—C18−175.05 (16)C6—C1—S1—O1129.69 (16)
C15—C13—C14—C184.7 (3)C2—C1—S1—O1−47.59 (17)
C14—C13—C15—O3−176.9 (2)C6—C1—S1—N1−116.77 (15)
C12—C13—C15—O32.8 (3)C2—C1—S1—N165.94 (16)
C14—C13—C15—O43.1 (3)
D—H···AD—HH···AD···AD—H···A
C2—H2···O50.932.573.446 (2)157
C6—H6···O20.932.502.875 (3)105
C8—H8···O20.932.422.993 (3)120
C11—H11···O30.932.483.003 (3)116
C18—H18A···O40.972.312.886 (3)117
C18—H18B···O10.972.302.793 (3)111
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C2—H2⋯O50.932.573.446 (2)157
C6—H6⋯O20.932.502.875 (3)105
C8—H8⋯O20.932.422.993 (3)120
C11—H11⋯O30.932.483.003 (3)116
C18—H18A⋯O40.972.312.886 (3)117
C18—H18B⋯O10.972.302.793 (3)111
  8 in total

1.  Antifungal activity of venenatine, an indole alkaloid isolated from Alstonia venenata.

Authors:  U P Singh; B K Sarma; P K Mishra; A B Ray
Journal:  Folia Microbiol (Praha)       Date:  2000       Impact factor: 2.099

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

Review 3.  [Potential anticancer and antiparasitic indole alkaloids].

Authors:  J Quetin-Leclercq
Journal:  J Pharm Belg       Date:  1994 May-Jun

4.  Synthesis and antitumor activity of substituted 3-(5-imidazo[2,1-b]thiazolylmethylene)-2-indolinones.

Authors:  A Andreani; M Granaiola; A Leoni; A Locatelli; R Morigi; M Rambaldi; G Giorgi; L Salvini; V Garaliene
Journal:  Anticancer Drug Des       Date:  2001 Apr-Jun

5.  Ethyl 2-(3,4-dimethoxy-benz-yl)-1-phenyl-sulfonyl-1H-indole-3-carboxyl-ate.

Authors:  B Gunasekaran; Radhakrishnan Sureshbabu; A K Mohanakrishnan; G Chakkaravarthi; V Manivannan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-07-15

6.  Anticancer indole alkaloids of Rhazya stricta.

Authors:  S Mukhopadhyay; G A Handy; S Funayama; G A Cordell
Journal:  J Nat Prod       Date:  1981 Nov-Dec       Impact factor: 4.050

7.  Ethyl 2-(bromo-meth-yl)-5-meth-oxy-1-phenyl-sulfonyl-1H-indole-3-carboxyl-ate.

Authors:  G Chakkaravarthi; Radhakrishnan Sureshbabu; A K Mohanakrishnan; V Manivannan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-03-20

8.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  8 in total
  2 in total

1.  3,4-Dibromo-2,5-dimethyl-1-phenyl-sulfonyl-1H-pyrrole.

Authors:  J Kanchanadevi; G Anbalagan; R Sureshbabu; A K Mohanakrishnan; V Manivannan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-08-02

2.  Crystal structure of (2-methyl-1-phenyl-sulfon-yl-1H-indol-3-yl)(phen-yl)methanone.

Authors:  M Umadevi; V Saravanan; R Yamuna; A K Mohanakrishnan; G Chakkaravarthi
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-01-03
  2 in total

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