Literature DB >> 21559053

Genetic variation in the Sorbs of eastern Germany in the context of broader European genetic diversity.

Krishna R Veeramah1, Anke Tönjes, Peter Kovacs, Arnd Gross, Daniel Wegmann, Patrick Geary, Daniela Gasperikova, Iwar Klimes, Markus Scholz, John Novembre, Michael Stumvoll.   

Abstract

Population isolates have long been of interest to genetic epidemiologists because of their potential to increase power to detect disease-causing genetic variants. The Sorbs of Germany are considered as cultural and linguistic isolates and have recently been the focus of disease association mapping efforts. They are thought to have settled in their present location in eastern Germany after a westward migration from a largely Slavic-speaking territory during the Middle Ages. To examine Sorbian genetic diversity within the context of other European populations, we analyzed genotype data for over 30 000 autosomal single-nucleotide polymorphisms from over 200 Sorbs individuals. We compare the Sorbs with other European individuals, including samples from population isolates. Despite their geographical proximity to German speakers, the Sorbs showed greatest genetic similarity to Polish and Czech individuals, consistent with the linguistic proximity of Sorbian to other West Slavic languages. The Sorbs also showed evidence of subtle levels of genetic isolation in comparison with samples from non-isolated European populations. The level of genetic isolation was less than that observed for the Sardinians and French Basque, who were clear outliers on multiple measures of isolation. The finding of the Sorbs as only a minor genetic isolate demonstrates the need to genetically characterize putative population isolates, as they possess a wide range of levels of isolation because of their different demographic histories.

Mesh:

Year:  2011        PMID: 21559053      PMCID: PMC3179365          DOI: 10.1038/ejhg.2011.65

Source DB:  PubMed          Journal:  Eur J Hum Genet        ISSN: 1018-4813            Impact factor:   4.246


  37 in total

1.  Magnitude and distribution of linkage disequilibrium in population isolates and implications for genome-wide association studies.

Authors:  Susan Service; Joseph DeYoung; Maria Karayiorgou; J Louw Roos; Herman Pretorious; Gabriel Bedoya; Jorge Ospina; Andres Ruiz-Linares; António Macedo; Joana Almeida Palha; Peter Heutink; Yurii Aulchenko; Ben Oostra; Cornelia van Duijn; Marjo-Riitta Jarvelin; Teppo Varilo; Lynette Peddle; Proton Rahman; Giovanna Piras; Maria Monne; Sarah Murray; Luana Galver; Leena Peltonen; Chiara Sabatti; Andrew Collins; Nelson Freimer
Journal:  Nat Genet       Date:  2006-04-02       Impact factor: 38.330

2.  Patterns of linkage disequilibrium between SNPs in a Sardinian population isolate and the selection of markers for association studies.

Authors:  Andrea Angius; Fiona C L Hyland; Ivana Persico; Nicola Pirastu; Trevor Woodage; Mario Pirastu; Francisco M De la Vega
Journal:  Hum Hered       Date:  2007-07-25       Impact factor: 0.444

3.  Genotype, haplotype and copy-number variation in worldwide human populations.

Authors:  Mattias Jakobsson; Sonja W Scholz; Paul Scheet; J Raphael Gibbs; Jenna M VanLiere; Hon-Chung Fung; Zachary A Szpiech; James H Degnan; Kai Wang; Rita Guerreiro; Jose M Bras; Jennifer C Schymick; Dena G Hernandez; Bryan J Traynor; Javier Simon-Sanchez; Mar Matarin; Angela Britton; Joyce van de Leemput; Ian Rafferty; Maja Bucan; Howard M Cann; John A Hardy; Noah A Rosenberg; Andrew B Singleton
Journal:  Nature       Date:  2008-02-21       Impact factor: 49.962

4.  A novel locus for arterial hypertension on chromosome 1p36 maps to a metabolic syndrome trait cluster in the Sorbs, a Slavic population isolate in Germany.

Authors:  Katrin Hoffmann; Christian Planitz; Franz Rüschendorf; Bertram Müller-Myhsok; Hans H Stassen; Barbara Lucke; Manuel Mattheisen; Michael Stumvoll; Rolf Bochmann; Martin Zschornack; Thomas F Wienker; Peter Nürnberg; André Reis; Friedrich C Luft; Tom H Lindner
Journal:  J Hypertens       Date:  2009-05       Impact factor: 4.844

5.  Correlation between genetic and geographic structure in Europe.

Authors:  Oscar Lao; Timothy T Lu; Michael Nothnagel; Olaf Junge; Sandra Freitag-Wolf; Amke Caliebe; Miroslava Balascakova; Jaume Bertranpetit; Laurence A Bindoff; David Comas; Gunilla Holmlund; Anastasia Kouvatsi; Milan Macek; Isabelle Mollet; Walther Parson; Jukka Palo; Rafal Ploski; Antti Sajantila; Adriano Tagliabracci; Ulrik Gether; Thomas Werge; Fernando Rivadeneira; Albert Hofman; André G Uitterlinden; Christian Gieger; Heinz-Erich Wichmann; Andreas Rüther; Stefan Schreiber; Christian Becker; Peter Nürnberg; Matthew R Nelson; Michael Krawczak; Manfred Kayser
Journal:  Curr Biol       Date:  2008-08-07       Impact factor: 10.834

6.  The Population Reference Sample, POPRES: a resource for population, disease, and pharmacological genetics research.

Authors:  Matthew R Nelson; Katarzyna Bryc; Karen S King; Amit Indap; Adam R Boyko; John Novembre; Linda P Briley; Yuka Maruyama; Dawn M Waterworth; Gérard Waeber; Peter Vollenweider; Jorge R Oksenberg; Stephen L Hauser; Heide A Stirnadel; Jaspal S Kooner; John C Chambers; Brendan Jones; Vincent Mooser; Carlos D Bustamante; Allen D Roses; Daniel K Burns; Margaret G Ehm; Eric H Lai
Journal:  Am J Hum Genet       Date:  2008-08-28       Impact factor: 11.025

7.  Population study and evaluation of 20 Y-chromosome STR loci in Germans.

Authors:  Heike Rodig; Manja Grum; Hans-Dieter Grimmecke
Journal:  Int J Legal Med       Date:  2006-05-20       Impact factor: 2.686

8.  Worldwide human relationships inferred from genome-wide patterns of variation.

Authors:  Jun Z Li; Devin M Absher; Hua Tang; Audrey M Southwick; Amanda M Casto; Sohini Ramachandran; Howard M Cann; Gregory S Barsh; Marcus Feldman; Luigi L Cavalli-Sforza; Richard M Myers
Journal:  Science       Date:  2008-02-22       Impact factor: 47.728

9.  Genes mirror geography within Europe.

Authors:  John Novembre; Toby Johnson; Katarzyna Bryc; Zoltán Kutalik; Adam R Boyko; Adam Auton; Amit Indap; Karen S King; Sven Bergmann; Matthew R Nelson; Matthew Stephens; Carlos D Bustamante
Journal:  Nature       Date:  2008-08-31       Impact factor: 49.962

10.  Isolated populations and complex disease gene identification.

Authors:  Kati Kristiansson; Jussi Naukkarinen; Leena Peltonen
Journal:  Genome Biol       Date:  2008-08-26       Impact factor: 13.583

View more
  31 in total

1.  Coevolution of genes and languages and high levels of population structure among the highland populations of Daghestan.

Authors:  Tatiana M Karafet; Kazima B Bulayeva; Johanna Nichols; Oleg A Bulayev; Farida Gurgenova; Jamilia Omarova; Levon Yepiskoposyan; Olga V Savina; Barry H Rodrigue; Michael F Hammer
Journal:  J Hum Genet       Date:  2015-11-26       Impact factor: 3.172

2.  THOC5: a novel gene involved in HDL-cholesterol metabolism.

Authors:  Maria Keller; Dorit Schleinitz; Julia Förster; Anke Tönjes; Yvonne Böttcher; Antje Fischer-Rosinsky; Jana Breitfeld; Kerstin Weidle; Nigel W Rayner; Ralph Burkhardt; Beate Enigk; Ines Müller; Jan Halbritter; Moritz Koriath; Andreas Pfeiffer; Knut Krohn; Leif Groop; Joachim Spranger; Michael Stumvoll; Peter Kovacs
Journal:  J Lipid Res       Date:  2013-09-10       Impact factor: 5.922

3.  Extensive genome-wide autozygosity in the population isolates of Daghestan.

Authors:  Tatiana M Karafet; Kazima B Bulayeva; Oleg A Bulayev; Farida Gurgenova; Jamilia Omarova; Levon Yepiskoposyan; Olga V Savina; Krishna R Veeramah; Michael F Hammer
Journal:  Eur J Hum Genet       Date:  2015-01-21       Impact factor: 4.246

4.  Contemporary paternal genetic landscape of Polish and German populations: from early medieval Slavic expansion to post-World War II resettlements.

Authors:  Krzysztof Rębała; Begoña Martínez-Cruz; Anke Tönjes; Peter Kovacs; Michael Stumvoll; Iris Lindner; Andreas Büttner; H-Erich Wichmann; Daniela Siváková; Miroslav Soták; Lluís Quintana-Murci; Zofia Szczerkowska; David Comas
Journal:  Eur J Hum Genet       Date:  2012-09-12       Impact factor: 4.246

Review 5.  Demographic events and evolutionary forces shaping European genetic diversity.

Authors:  Krishna R Veeramah; John Novembre
Journal:  Cold Spring Harb Perspect Biol       Date:  2014-07-24       Impact factor: 10.005

6.  Global DNA methylation levels in human adipose tissue are related to fat distribution and glucose homeostasis.

Authors:  Maria Keller; Susan Kralisch; Kerstin Rohde; Dorit Schleinitz; Arne Dietrich; Michael R Schön; Daniel Gärtner; Tobias Lohmann; Miriam Dreßler; Anke Tönjes; Michael Stumvoll; Peter Kovacs; Mathias Fasshauer; Matthias Blüher; Yvonne Böttcher
Journal:  Diabetologia       Date:  2014-08-22       Impact factor: 10.122

7.  Role of genetic variants in ADIPOQ in human eating behavior.

Authors:  Kerstin Rohde; Maria Keller; Annette Horstmann; Xuanshi Liu; Fabian Eichelmann; Michael Stumvoll; Arno Villringer; Peter Kovacs; Anke Tönjes; Yvonne Böttcher
Journal:  Genes Nutr       Date:  2014-12-27       Impact factor: 5.523

8.  Association of metabolic parameters and rs726344 in FNDC5 with serum irisin concentrations.

Authors:  T Ebert; S Kralisch; U Wurst; M Scholz; M Stumvoll; P Kovacs; M Fasshauer; A Tönjes
Journal:  Int J Obes (Lond)       Date:  2015-08-19       Impact factor: 5.095

Review 9.  The impact of whole-genome sequencing on the reconstruction of human population history.

Authors:  Krishna R Veeramah; Michael F Hammer
Journal:  Nat Rev Genet       Date:  2014-02-04       Impact factor: 53.242

10.  Analysis of a rare functional truncating mutation rs61757459 in vaspin (SERPINA12) on circulating vaspin levels.

Authors:  Jana Breitfeld; John T Heiker; Yvonne Böttcher; Dorit Schleinitz; Anke Tönjes; Kerstin Weidle; Kerstin Krause; E Bartholomeus Kuettner; Markus Scholz; Wieland Kiess; Norbert Sträter; Annette G Beck-Sickinger; Michael Stumvoll; Antje Körner; Matthias Blüher; Peter Kovacs
Journal:  J Mol Med (Berl)       Date:  2013-06-12       Impact factor: 4.599

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.