Literature DB >> 18758442

Genes mirror geography within Europe.

John Novembre1, Toby Johnson, Katarzyna Bryc, Zoltán Kutalik, Adam R Boyko, Adam Auton, Amit Indap, Karen S King, Sven Bergmann, Matthew R Nelson, Matthew Stephens, Carlos D Bustamante.   

Abstract

Understanding the genetic structure of human populations is of fundamental interest to medical, forensic and anthropological sciences. Advances in high-throughput genotyping technology have markedly improved our understanding of global patterns of human genetic variation and suggest the potential to use large samples to uncover variation among closely spaced populations. Here we characterize genetic variation in a sample of 3,000 European individuals genotyped at over half a million variable DNA sites in the human genome. Despite low average levels of genetic differentiation among Europeans, we find a close correspondence between genetic and geographic distances; indeed, a geographical map of Europe arises naturally as an efficient two-dimensional summary of genetic variation in Europeans. The results emphasize that when mapping the genetic basis of a disease phenotype, spurious associations can arise if genetic structure is not properly accounted for. In addition, the results are relevant to the prospects of genetic ancestry testing; an individual's DNA can be used to infer their geographic origin with surprising accuracy-often to within a few hundred kilometres.

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Year:  2008        PMID: 18758442      PMCID: PMC2735096          DOI: 10.1038/nature07331

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  27 in total

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8.  Measuring European population stratification with microarray genotype data.

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