Literature DB >> 21544837

Lectin-based structural glycomics: a practical approach to complex glycans.

Jun Hirabayashi1, Atsushi Kuno, Hiroaki Tateno.   

Abstract

Glycans exist in nature in various forms of glycoconjugates, i.e., glycoproteins, glycolipids, and glycosaminoglycans, either in soluble or membrane-bound forms. One of their prominent properties distinguished from nucleic acids and proteins is "heterogeneity" largely attributed to their inherent features of biosynthesis. In general, various methods based on the physicochemical principles have been taken for their separation and structural determination although all of them require prior liberation of glycans and appropriate labeling. On the other hand, a series of carbohydrate-binding proteins, or "lectins," have extensively been used in a more direct manner for cell typing, histochemical staining, and glycoprotein fractionation. Although most procedures conventionally used are useful, unfortunately they lack "throughput" comparable to a performance required for current omics studies. Recently, a novel technique called lectin microarray has attracted increasing attention from not only glycoscientists but also researchers in other fields, because it is straightforward and also informative. The method is innovating in that it enables direct approach to glycoconjugates such as glycoproteins and even cells without liberation of glycans from the core substrate, and therefore can be effectively applied for the sake of differential profiling in various fields. Concept, strategy, and technical advancement of lectin microarray are described. Also, as an introduction to glycomics, the authors explain the motivation to challenge this theme.
Copyright © 2011 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

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Year:  2011        PMID: 21544837     DOI: 10.1002/elps.201000650

Source DB:  PubMed          Journal:  Electrophoresis        ISSN: 0173-0835            Impact factor:   3.535


  23 in total

Review 1.  Application of glycoproteomics for the discovery of biomarkers in lung cancer.

Authors:  Qing Kay Li; Edward Gabrielson; Hui Zhang
Journal:  Proteomics Clin Appl       Date:  2012-06       Impact factor: 3.494

2.  Crystallization and preliminary X-ray diffraction studies of frutalin, an α-D-galactose-specific lectin from Artocarpus incisa seeds.

Authors:  Ana Cristina de Oliveira Monteiro-Moreira; Humberto D'Muniz Pereira; Antonio Eufrasio Vieira Neto; Frederico Bruno Mendes Batista Moreno; Marina Duarte Pinto Lobo; Felipe Domingos de Sousa; Renato de Azevedo Moreira
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2015-09-23       Impact factor: 1.056

3.  Cell surface lectin array: parameters affecting cell glycan signature.

Authors:  Ludovic Landemarre; Perrine Cancellieri; Eric Duverger
Journal:  Glycoconj J       Date:  2012-08-17       Impact factor: 2.916

4.  On-chip lectin microarray for glycoprofiling of different gastritis types and gastric cancer.

Authors:  Bibhas Roy; Gautam Chattopadhyay; Debasish Mishra; Tamal Das; Suman Chakraborty; Tapas K Maiti
Journal:  Biomicrofluidics       Date:  2014-06-06       Impact factor: 2.800

5.  'Clickable lectins': bioorthogonal reactive handles facilitate the directed conjugation of lectins in a modular fashion.

Authors:  Felix Tobola; Elise Sylvander; Claudia Gafko; Birgit Wiltschi
Journal:  Interface Focus       Date:  2019-02-15       Impact factor: 3.906

Review 6.  Application of microarrays for deciphering the structure and function of the human glycome.

Authors:  David F Smith; Richard D Cummings
Journal:  Mol Cell Proteomics       Date:  2013-02-14       Impact factor: 5.911

Review 7.  Liquid-phase-based separation systems for depletion, prefractionation and enrichment of proteins in biological fluids and matrices for in-depth proteomics analysis--an update covering the period 2008-2011.

Authors:  Subhashini Selvaraju; Ziad El Rassi
Journal:  Electrophoresis       Date:  2011-11-28       Impact factor: 3.535

8.  Cross validation of liquid chromatography-mass spectrometry and lectin array for monitoring glycosylation in fed-batch glycoprotein production.

Authors:  Catherine A Hayes; Roisin Doohan; David Kirkley; Kirk Leister; Brendan Harhen; Angela V Savage; Niclas G Karlsson
Journal:  Mol Biotechnol       Date:  2012-07       Impact factor: 2.695

9.  Characterization and statistical modeling of glycosylation changes in sickle cell disease.

Authors:  Heather E Ashwood; Christopher Ashwood; Anna P Schmidt; Rebekah L Gundry; Karin M Hoffmeister; Waseem Q Anani
Journal:  Blood Adv       Date:  2021-03-09

Review 10.  Glycoproteomics using fluid-based specimens in the discovery of lung cancer protein biomarkers: promise and challenge.

Authors:  Qing Kay Li; Ed Gabrielson; Frederic Askin; Daniel W Chan; Hui Zhang
Journal:  Proteomics Clin Appl       Date:  2013-01       Impact factor: 3.494

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