Literature DB >> 23112109

Glycoproteomics using fluid-based specimens in the discovery of lung cancer protein biomarkers: promise and challenge.

Qing Kay Li1, Ed Gabrielson, Frederic Askin, Daniel W Chan, Hui Zhang.   

Abstract

Lung cancer is the leading cancer in the United States and worldwide. In spite of the rapid progression in personalized treatments, the overall survival rate of lung cancer patients is still suboptimal. Over the past decade, tremendous efforts have been focused on the discovery of protein biomarkers to facilitate the early detection and monitoring of lung cancer progression during treatment. In addition to tumor tissues and cancer cell lines, a variety of biological material has been studied. Particularly in recent years, studies using fluid-based specimen or so-called "fluid-biopsy" specimens have progressed rapidly. Fluid specimens are relatively easier to collect than tumor tissue, and they can be repeatedly sampled during the disease progression. Glycoproteins are the major content of fluid specimens and have long been recognized to play fundamental roles in many physiological and pathological processes. In this review, we focus the discussion on recent advances of glycoproteomics, particularly in the identification of potential glyco protein biomarkers using fluid-based specimens in lung cancer. The purpose of this review is to summarize current strategies, achievements, and perspectives in the field. This insight will highlight the discovery of tumor-associated glycoprotein biomarkers in lung cancer and their potential clinical applications.
© 2013 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

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Year:  2013        PMID: 23112109      PMCID: PMC5079647          DOI: 10.1002/prca.201200105

Source DB:  PubMed          Journal:  Proteomics Clin Appl        ISSN: 1862-8346            Impact factor:   3.494


  108 in total

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2.  Lectin affinity capture, isotope-coded tagging and mass spectrometry to identify N-linked glycoproteins.

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Review 3.  Glycosylation changes as markers for the diagnosis and treatment of human disease.

Authors:  Lily Tong; Gautam Baskaran; Mark B Jones; Jun Kyu Rhee; Kevin J Yarema
Journal:  Biotechnol Genet Eng Rev       Date:  2003

4.  Development of serum glycoproteomic profiling technique; simultaneous identification of glycosylation sites and site-specific quantification of glycan structure changes.

Authors:  Koji Ueda; Sachiko Takami; Naomi Saichi; Yataro Daigo; Nobuhisa Ishikawa; Nobuoki Kohno; Masaru Katsumata; Akio Yamane; Minoru Ota; Taka-Aki Sato; Yusuke Nakamura; Hidewaki Nakagawa
Journal:  Mol Cell Proteomics       Date:  2010-09       Impact factor: 5.911

5.  Peptidome profiling of induced sputum by mesoporous silica beads and MALDI-TOF MS for non-invasive biomarker discovery of chronic inflammatory lung diseases.

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Journal:  Proteomics       Date:  2011-08       Impact factor: 3.984

6.  Metabolic signatures of lung cancer in biofluids: NMR-based metabonomics of urine.

Authors:  Joana Carrola; Cláudia M Rocha; António S Barros; Ana M Gil; Brian J Goodfellow; Isabel M Carreira; João Bernardo; Ana Gomes; Vitor Sousa; Lina Carvalho; Iola F Duarte
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Review 7.  Progress in chemoprevention drug development: the promise of molecular biomarkers for prevention of intraepithelial neoplasia and cancer--a plan to move forward.

Authors:  Gary J Kelloff; Scott M Lippman; Andrew J Dannenberg; Caroline C Sigman; Homer L Pearce; Brian J Reid; Eva Szabo; V Craig Jordan; Margaret R Spitz; Gordon B Mills; Vali A Papadimitrakopoulou; Reuben Lotan; Bharat B Aggarwal; Robert S Bresalier; Jeri Kim; Banu Arun; Karen H Lu; Melanie E Thomas; Helen E Rhodes; Molly A Brewer; Michele Follen; Dong M Shin; Howard L Parnes; Jill M Siegfried; Alison A Evans; William J Blot; Wong-Ho Chow; Patricia L Blount; Carlo C Maley; Kenneth K Wang; Stephen Lam; J Jack Lee; Steven M Dubinett; Paul F Engstrom; Frank L Meyskens; Joyce O'Shaughnessy; Ernest T Hawk; Bernard Levin; William G Nelson; Waun Ki Hong
Journal:  Clin Cancer Res       Date:  2006-06-15       Impact factor: 12.531

8.  Detection and verification of glycosylation patterns of glycoproteins from clinical specimens using lectin microarrays and lectin-based immunosorbent assays.

Authors:  Yan Li; Sheng-Ce Tao; G Steven Bova; Alvin Y Liu; Daniel W Chan; Heng Zhu; Hui Zhang
Journal:  Anal Chem       Date:  2011-10-26       Impact factor: 6.986

9.  Glycoproteomic analysis of human lung adenocarcinomas using glycoarrays and tandem mass spectrometry: differential expression and glycosylation patterns of vimentin and fetuin A isoforms.

Authors:  Jung-Hyun Rho; Michael H A Roehrl; Julia Y Wang
Journal:  Protein J       Date:  2009-05       Impact factor: 2.371

Review 10.  Biological roles of oligosaccharides: all of the theories are correct.

Authors:  A Varki
Journal:  Glycobiology       Date:  1993-04       Impact factor: 4.313

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  5 in total

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Journal:  J Proteome Res       Date:  2013-07-11       Impact factor: 4.466

2.  Alterations in the proteome of the respiratory tract in response to single and multiple exposures to naphthalene.

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Journal:  Proteomics       Date:  2015-05-13       Impact factor: 3.984

3.  Aberrant Mucin5B expression in lung adenocarcinomas detected by iTRAQ labeling quantitative proteomics and immunohistochemistry.

Authors:  Yan Li; Xiangchun Wang; Minghui Ao; Edward Gabrielson; Frederic Askin; Hui Zhang; Qing Kay Li
Journal:  Clin Proteomics       Date:  2013-11-01       Impact factor: 3.988

4.  Expression of transcript factors SALL4 and OCT4 in a subset of non-small cell lung carcinomas (NSCLC).

Authors:  Erika Rodriguez; Li Chen; Ming-Hui Ao; Susan Geddes; Ed Gabrielson; Frederic Askin; Hui Zhang; Qing Kay Li
Journal:  Transl Respir Med       Date:  2014-10-02

5.  Proteomic Analysis of the Air-Way Fluid in Lung Cancer. Detection of Periostin in Bronchoalveolar Lavage (BAL).

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Journal:  Front Oncol       Date:  2020-07-03       Impact factor: 6.244

  5 in total

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