Literature DB >> 22090981

2,2-Dimethyl-5-(2,3,4-trimeth-oxy-benzyl-idene)-1,3-dioxane-4,6-dione.

Wu-Lan Zeng1.   

Abstract

The title compound, C(16)H(18)O(7), was prepared by the reaction of 2,2-dimethyl-1,3-dioxane-4,6-dione and 2,3,4-trimeth-oxy-benzaldehyde. The 1,3-dioxane ring is in a slightly distorted boat conformation. The crystal structure is stabilized by weak inter-molecular C-H⋯O hydrogen bonds.

Entities:  

Year:  2011        PMID: 22090981      PMCID: PMC3212324          DOI: 10.1107/S1600536811026201

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Zeng (2011a ▶,b ▶).

Experimental

Crystal data

C16H18O7 M = 322.30 Monoclinic, a = 12.722 (3) Å b = 9.2669 (19) Å c = 13.537 (3) Å β = 98.83 (3)° V = 1577.0 (5) Å3 Z = 4 Mo Kα radiation μ = 0.11 mm−1 T = 293 K 0.22 × 0.18 × 0.16 mm

Data collection

Bruker SMART CCD diffractometer 14870 measured reflections 3613 independent reflections 3073 reflections with I > 2σ(I) R int = 0.033

Refinement

R[F 2 > 2σ(F 2)] = 0.043 wR(F 2) = 0.131 S = 1.03 3613 reflections 208 parameters H-atom parameters constrained Δρmax = 0.33 e Å−3 Δρmin = −0.25 e Å−3 Data collection: SMART (Bruker, 1997 ▶); cell refinement: SAINT (Bruker, 1997 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811026201/lh5270sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811026201/lh5270Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811026201/lh5270Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H18O7F(000) = 680
Mr = 322.30Dx = 1.358 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 3073 reflections
a = 12.722 (3) Åθ = 3.0–27.5°
b = 9.2669 (19) ŵ = 0.11 mm1
c = 13.537 (3) ÅT = 293 K
β = 98.83 (3)°Block, yellow
V = 1577.0 (5) Å30.22 × 0.18 × 0.16 mm
Z = 4
Bruker SMART CCD diffractometer3073 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.033
graphiteθmax = 27.5°, θmin = 3.0°
φ and ω scansh = −16→16
14870 measured reflectionsk = −12→10
3613 independent reflectionsl = −17→17
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.043Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.131H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.0828P)2 + 0.1973P] where P = (Fo2 + 2Fc2)/3
3613 reflections(Δ/σ)max < 0.001
208 parametersΔρmax = 0.33 e Å3
0 restraintsΔρmin = −0.25 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O20.52394 (8)0.12332 (10)0.25642 (7)0.0477 (2)
O30.30226 (7)0.11922 (11)0.24083 (6)0.0475 (2)
O70.01954 (7)0.41504 (10)−0.11404 (7)0.0455 (2)
O5−0.04628 (7)0.11016 (11)0.07142 (6)0.0470 (2)
O6−0.09078 (7)0.23104 (10)−0.06837 (6)0.0423 (2)
O40.17489 (8)0.46436 (11)−0.02499 (9)0.0549 (3)
O10.61501 (7)0.18353 (12)0.09474 (8)0.0535 (3)
C140.10299 (10)0.38024 (13)−0.04308 (9)0.0390 (3)
C90.35150 (10)0.14559 (12)0.15946 (9)0.0373 (3)
C130.09149 (9)0.24390 (13)0.01095 (8)0.0361 (3)
C12−0.01832 (9)0.18810 (13)0.00905 (8)0.0361 (3)
C80.46155 (10)0.14555 (13)0.16543 (9)0.0387 (3)
C40.28552 (10)0.18482 (13)0.07028 (9)0.0390 (3)
C70.50721 (10)0.18263 (13)0.08077 (10)0.0413 (3)
C60.44249 (11)0.21837 (16)−0.00816 (10)0.0467 (3)
H6A0.47260.2408−0.06470.056*
C50.33352 (11)0.22040 (15)−0.01229 (10)0.0455 (3)
H5A0.29100.2462−0.07180.055*
C100.17081 (10)0.17055 (14)0.06602 (9)0.0395 (3)
H10A0.14930.10020.10760.047*
C11−0.05435 (10)0.30305 (14)−0.15114 (9)0.0414 (3)
C15−0.15002 (13)0.37887 (18)−0.20694 (12)0.0561 (4)
H15A−0.17810.4445−0.16280.084*
H15B−0.20330.3090−0.23160.084*
H15C−0.12960.4315−0.26210.084*
C30.32531 (14)−0.01527 (18)0.29164 (13)0.0626 (4)
H3A0.2861−0.02160.34670.094*
H3B0.4001−0.02100.31620.094*
H3C0.3052−0.09340.24610.094*
C20.58511 (12)−0.00798 (17)0.26325 (14)0.0616 (4)
H2A0.6262−0.01560.32870.092*
H2B0.6320−0.00680.21410.092*
H2C0.5379−0.08910.25150.092*
C16−0.00279 (14)0.19646 (17)−0.21299 (10)0.0563 (4)
H16A0.05740.1530−0.17240.084*
H16B0.02030.2456−0.26830.084*
H16C−0.05320.1230−0.23770.084*
C10.66751 (13)0.2140 (2)0.01138 (14)0.0695 (5)
H1A0.74310.21120.03210.104*
H1B0.64710.3082−0.01430.104*
H1C0.64760.1432−0.03990.104*
U11U22U33U12U13U23
O20.0458 (5)0.0472 (5)0.0461 (5)−0.0004 (4)−0.0054 (4)0.0007 (4)
O30.0486 (5)0.0564 (6)0.0394 (5)0.0052 (4)0.0130 (4)0.0080 (4)
O70.0446 (5)0.0398 (5)0.0518 (5)0.0001 (4)0.0062 (4)0.0080 (4)
O50.0473 (5)0.0564 (5)0.0399 (5)−0.0060 (4)0.0141 (4)0.0081 (4)
O60.0350 (4)0.0527 (5)0.0392 (4)−0.0028 (4)0.0058 (3)0.0051 (4)
O40.0456 (5)0.0437 (5)0.0765 (7)−0.0090 (4)0.0134 (5)−0.0020 (5)
O10.0344 (5)0.0634 (6)0.0636 (6)−0.0038 (4)0.0109 (4)−0.0018 (5)
C140.0361 (6)0.0377 (6)0.0455 (6)0.0008 (5)0.0134 (5)−0.0020 (5)
C90.0402 (6)0.0364 (6)0.0360 (6)−0.0007 (5)0.0082 (5)−0.0009 (4)
C130.0350 (6)0.0407 (6)0.0336 (5)−0.0019 (4)0.0082 (4)−0.0017 (4)
C120.0356 (6)0.0412 (6)0.0329 (5)−0.0005 (4)0.0096 (4)−0.0022 (4)
C80.0385 (6)0.0352 (6)0.0408 (6)−0.0010 (5)0.0012 (5)−0.0018 (4)
C40.0358 (6)0.0426 (6)0.0389 (6)0.0011 (5)0.0072 (5)0.0003 (5)
C70.0359 (6)0.0390 (6)0.0499 (7)−0.0017 (5)0.0097 (5)−0.0046 (5)
C60.0438 (7)0.0554 (7)0.0435 (7)0.0023 (6)0.0149 (5)0.0022 (6)
C50.0421 (7)0.0567 (8)0.0381 (6)0.0051 (6)0.0072 (5)0.0042 (5)
C100.0390 (6)0.0454 (6)0.0349 (5)−0.0004 (5)0.0079 (5)0.0008 (5)
C110.0442 (7)0.0437 (6)0.0364 (6)−0.0003 (5)0.0063 (5)0.0044 (5)
C150.0520 (8)0.0605 (9)0.0524 (8)0.0052 (6)−0.0034 (6)0.0089 (6)
C30.0726 (10)0.0571 (9)0.0623 (9)−0.0038 (7)0.0240 (8)0.0149 (7)
C20.0482 (8)0.0536 (8)0.0775 (10)0.0039 (6)−0.0074 (7)0.0128 (7)
C160.0732 (10)0.0582 (8)0.0390 (6)0.0102 (7)0.0131 (6)0.0002 (6)
C10.0452 (8)0.0925 (13)0.0762 (11)−0.0078 (8)0.0267 (8)−0.0085 (9)
O2—C81.3745 (15)C6—C51.3789 (19)
O2—C21.4396 (18)C6—H6A0.9300
O3—C91.3702 (14)C5—H5A0.9300
O3—C31.4319 (18)C10—H10A0.9300
O7—C141.3567 (16)C11—C151.5044 (19)
O7—C111.4379 (16)C11—C161.5085 (19)
O5—C121.2056 (14)C15—H15A0.9600
O6—C121.3453 (15)C15—H15B0.9600
O6—C111.4406 (14)C15—H15C0.9600
O4—C141.1981 (15)C3—H3A0.9600
O1—C71.3553 (15)C3—H3B0.9600
O1—C11.4251 (19)C3—H3C0.9600
C14—C131.4783 (17)C2—H2A0.9600
C9—C81.3898 (17)C2—H2B0.9600
C9—C41.4082 (17)C2—H2C0.9600
C13—C101.3436 (17)C16—H16A0.9600
C13—C121.4861 (16)C16—H16B0.9600
C8—C71.4048 (18)C16—H16C0.9600
C4—C51.3931 (17)C1—H1A0.9600
C4—C101.4576 (17)C1—H1B0.9600
C7—C61.3901 (19)C1—H1C0.9600
C8—O2—C2114.60 (11)O7—C11—C15105.86 (11)
C9—O3—C3117.14 (11)O6—C11—C15105.95 (11)
C14—O7—C11118.31 (10)O7—C11—C16110.48 (11)
C12—O6—C11118.63 (9)O6—C11—C16110.34 (11)
C7—O1—C1118.55 (12)C15—C11—C16114.48 (12)
O4—C14—O7118.68 (12)C11—C15—H15A109.5
O4—C14—C13125.83 (12)C11—C15—H15B109.5
O7—C14—C13115.29 (10)H15A—C15—H15B109.5
O3—C9—C8122.28 (11)C11—C15—H15C109.5
O3—C9—C4116.70 (11)H15A—C15—H15C109.5
C8—C9—C4120.82 (11)H15B—C15—H15C109.5
C10—C13—C14125.73 (11)O3—C3—H3A109.5
C10—C13—C12117.23 (11)O3—C3—H3B109.5
C14—C13—C12116.94 (10)H3A—C3—H3B109.5
O5—C12—O6118.84 (11)O3—C3—H3C109.5
O5—C12—C13125.03 (11)H3A—C3—H3C109.5
O6—C12—C13116.13 (10)H3B—C3—H3C109.5
O2—C8—C9119.34 (11)O2—C2—H2A109.5
O2—C8—C7120.90 (11)O2—C2—H2B109.5
C9—C8—C7119.44 (11)H2A—C2—H2B109.5
C5—C4—C9118.16 (11)O2—C2—H2C109.5
C5—C4—C10123.32 (12)H2A—C2—H2C109.5
C9—C4—C10118.16 (11)H2B—C2—H2C109.5
O1—C7—C6124.85 (12)C11—C16—H16A109.5
O1—C7—C8115.09 (12)C11—C16—H16B109.5
C6—C7—C8120.04 (11)H16A—C16—H16B109.5
C5—C6—C7119.77 (12)C11—C16—H16C109.5
C5—C6—H6A120.1H16A—C16—H16C109.5
C7—C6—H6A120.1H16B—C16—H16C109.5
C6—C5—C4121.74 (12)O1—C1—H1A109.5
C6—C5—H5A119.1O1—C1—H1B109.5
C4—C5—H5A119.1H1A—C1—H1B109.5
C13—C10—C4129.65 (11)O1—C1—H1C109.5
C13—C10—H10A115.2H1A—C1—H1C109.5
C4—C10—H10A115.2H1B—C1—H1C109.5
O7—C11—O6109.50 (10)
D—H···AD—HH···AD···AD—H···A
C3—H3A···O4i0.962.463.392 (2)163
C16—H16B···O5ii0.962.583.397 (2)143
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C3—H3A⋯O4i0.962.463.392 (2)163
C16—H16B⋯O5ii0.962.583.397 (2)143

Symmetry codes: (i) ; (ii) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  2,2-Dimethyl-5-[(5-methyl-furan-2-yl)methyl-idene]-1,3-dioxane-4,6-dione.

Authors:  Wu-Lan Zeng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-01-22

3.  5-(3,4-Dimethyl-benzyl-idene)-2,2-dimethyl-1,3-dioxane-4,6-dione.

Authors:  Wu-Lan Zeng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-05-07
  3 in total
  1 in total

1.  Crystal structure of 5-[4-(di-ethyl-amino)-benzyl-idene]-2,2-dimethyl-1,3-dioxane-4,6-dione.

Authors:  Egija Stepina; Dmitrijs Stepanovs; Inese Mierina; Mara Jure
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-09-26
  1 in total

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