Literature DB >> 21522680

rac-Ammonium cis-2-carb-oxy-cyclo-hexane-1-carboxyl-ate.

Graham Smith1, Urs D Wermuth.   

Abstract

In the structure of the title compound, NH(4) (+)·C(8)H(11)O(4) (-), the carboxyl and carboxyl-ate groups of the cation adopt C-C-C-O torsion angles of 174.9 (2) and -145.4 (2)°, respectively, with the alicyclic ring. The ammonium H atoms of the cations give a total of five hydrogen-bonding associations with carboxyl-ate O-atom acceptors of the anion which, together with a carboxyl O-H⋯O(carboxyl-ate) inter-action give sheet structures which lie in the (101) planes.

Entities:  

Year:  2010        PMID: 21522680      PMCID: PMC3050381          DOI: 10.1107/S1600536810051883

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the structure of the isomeric racemic ammonium salt of trans-cyclo­hexane-1,2-dicarb­oxy­lic acid (TCDA), see: Stibrany et al. (2004 ▶). For the structures of rac-cis-CDA, rac-trans-CDA and (+)-trans-CDA, see: Benedetti et al. (1970 ▶); Benedetti, Corradini, Pedone & Post (1969 ▶); Benedetti, Corradini & Pedone (1969 ▶); Rizal & Ng (2008 ▶). The cis,trans-isomer exists as an essentially unresolvable racemate, see: Eliel (1962 ▶). For hydrogen-bond motifs, see: Etter et al. (1990 ▶).

Experimental

Crystal data

NH4C8H11O4 M = 189.21 Monoclinic, a = 15.4908 (13) Å b = 5.3475 (3) Å c = 12.1716 (9) Å β = 109.795 (9)° V = 948.68 (13) Å3 Z = 4 Mo Kα radiation μ = 0.11 mm−1 T = 200 K 0.30 × 0.22 × 0.10 mm

Data collection

Oxford Diffraction Gemini-S CCD-detector diffractometer Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2010 ▶) T min = 0.86, T max = 0.98 5997 measured reflections 1862 independent reflections 1313 reflections with I > 2σ(I) R int = 0.046

Refinement

R[F 2 > 2σ(F 2)] = 0.058 wR(F 2) = 0.141 S = 0.99 1862 reflections 138 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.44 e Å−3 Δρmin = −0.22 e Å−3 Data collection: CrysAlis PRO (Oxford Diffraction, 2010 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: PLATON. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810051883/ng5083sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810051883/ng5083Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
NH4+·C8H11O4F(000) = 408
Mr = 189.21Dx = 1.325 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2294 reflections
a = 15.4908 (13) Åθ = 3.4–28.6°
b = 5.3475 (3) ŵ = 0.11 mm1
c = 12.1716 (9) ÅT = 200 K
β = 109.795 (9)°Plate, colourless
V = 948.68 (13) Å30.30 × 0.22 × 0.10 mm
Z = 4
Oxford Diffraction Gemini-S CCD-detector diffractometer1862 independent reflections
Radiation source: Enhance (Mo) X-ray source1313 reflections with I > 2σ(I)
graphiteRint = 0.046
Detector resolution: 16.077 pixels mm-1θmax = 26.0°, θmin = 3.4°
ω scansh = −19→12
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2010)k = −6→6
Tmin = 0.86, Tmax = 0.98l = −15→15
5997 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.058Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.141H atoms treated by a mixture of independent and constrained refinement
S = 0.99w = 1/[σ2(Fo2) + (0.0838P)2] where P = (Fo2 + 2Fc2)/3
1862 reflections(Δ/σ)max < 0.001
138 parametersΔρmax = 0.44 e Å3
0 restraintsΔρmin = −0.22 e Å3
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O110.13732 (12)0.9964 (3)0.33214 (13)0.0306 (5)
O120.08448 (12)1.2330 (3)0.44276 (14)0.0329 (6)
O210.16061 (13)0.7624 (3)0.59854 (14)0.0368 (6)
O220.20622 (15)0.9149 (4)0.77916 (15)0.0450 (7)
C10.24584 (16)1.1450 (4)0.51309 (18)0.0243 (7)
C20.24599 (17)1.1538 (4)0.63967 (18)0.0242 (7)
C30.34336 (18)1.1894 (4)0.7268 (2)0.0323 (8)
C40.40930 (18)0.9929 (5)0.7113 (2)0.0345 (8)
C50.41077 (18)0.9927 (5)0.5871 (2)0.0383 (9)
C60.31483 (17)0.9528 (5)0.4989 (2)0.0302 (8)
C110.14981 (17)1.1222 (4)0.42428 (19)0.0253 (7)
C210.20048 (16)0.9222 (4)0.66831 (19)0.0245 (7)
N1−0.01140 (18)0.6903 (5)0.3749 (2)0.0320 (8)
H10.268701.308500.498900.0290*
H20.209601.299200.646400.0290*
H220.192 (3)0.764 (8)0.796 (3)0.088 (13)*
H310.365401.354300.716100.0390*
H320.341801.180000.805600.0390*
H410.470501.026500.765200.0410*
H420.390800.829200.729600.0410*
H510.451000.860700.578600.0460*
H520.434901.150900.571300.0460*
H610.293900.786000.508600.0360*
H620.317400.964800.420500.0360*
H1A0.016 (2)0.832 (6)0.363 (3)0.057 (10)*
H1B0.031 (3)0.566 (7)0.402 (3)0.071 (11)*
H1C−0.057 (2)0.647 (5)0.300 (2)0.044 (8)*
H1D−0.038 (2)0.728 (6)0.436 (3)0.072 (11)*
U11U22U33U12U13U23
O110.0415 (11)0.0289 (9)0.0191 (8)0.0057 (8)0.0071 (7)−0.0059 (7)
O120.0338 (11)0.0378 (10)0.0264 (9)0.0104 (8)0.0093 (7)−0.0021 (7)
O210.0556 (13)0.0292 (9)0.0254 (9)−0.0167 (9)0.0134 (8)−0.0038 (7)
O220.0814 (16)0.0360 (11)0.0207 (9)−0.0190 (11)0.0215 (9)−0.0004 (8)
C10.0336 (14)0.0186 (11)0.0232 (12)−0.0030 (10)0.0130 (10)0.0004 (9)
C20.0328 (14)0.0171 (11)0.0227 (11)0.0002 (10)0.0094 (10)−0.0009 (9)
C30.0398 (16)0.0259 (13)0.0288 (13)−0.0043 (11)0.0086 (11)−0.0033 (10)
C40.0258 (14)0.0362 (14)0.0349 (14)0.0010 (12)0.0017 (11)−0.0002 (11)
C50.0302 (15)0.0431 (16)0.0434 (16)0.0057 (13)0.0148 (12)0.0011 (12)
C60.0367 (15)0.0315 (14)0.0260 (13)0.0026 (11)0.0153 (11)0.0003 (10)
C110.0386 (15)0.0173 (11)0.0225 (12)0.0017 (11)0.0137 (10)0.0037 (9)
C210.0301 (13)0.0216 (11)0.0212 (12)0.0020 (10)0.0081 (10)0.0016 (9)
N10.0373 (14)0.0327 (13)0.0244 (12)−0.0003 (11)0.0085 (10)0.0038 (10)
O11—C111.265 (3)C3—C41.521 (4)
O12—C111.257 (3)C4—C51.520 (3)
O21—C211.216 (3)C5—C61.525 (4)
O22—C211.322 (3)C1—H10.9800
O22—H220.88 (4)C2—H20.9800
N1—H1D0.99 (3)C3—H310.9700
N1—H1B0.91 (4)C3—H320.9700
N1—H1C0.97 (2)C4—H410.9700
N1—H1A0.90 (3)C4—H420.9700
C1—C111.519 (3)C5—H520.9700
C1—C21.541 (3)C5—H510.9700
C1—C61.534 (4)C6—H610.9700
C2—C31.534 (4)C6—H620.9700
C2—C211.523 (3)
C21—O22—H22109 (2)C6—C1—H1106.00
H1B—N1—H1C112 (3)C1—C2—H2108.00
H1C—N1—H1D114 (3)C3—C2—H2108.00
H1B—N1—H1D108 (3)C21—C2—H2108.00
H1A—N1—H1D107 (3)H31—C3—H32108.00
H1A—N1—H1B110 (3)C2—C3—H31109.00
H1A—N1—H1C106 (3)C2—C3—H32109.00
C6—C1—C11114.70 (18)C4—C3—H31109.00
C2—C1—C6111.59 (18)C4—C3—H32109.00
C2—C1—C11112.6 (2)C3—C4—H42109.00
C1—C2—C3111.3 (2)C5—C4—H41109.00
C1—C2—C21111.10 (18)C3—C4—H41109.00
C3—C2—C21111.46 (18)H41—C4—H42108.00
C2—C3—C4111.90 (19)C5—C4—H42109.00
C3—C4—C5111.2 (2)C6—C5—H51109.00
C4—C5—C6111.2 (2)C4—C5—H52109.00
C1—C6—C5112.2 (2)C4—C5—H51109.00
O11—C11—O12121.2 (2)C6—C5—H52109.00
O11—C11—C1119.5 (2)H51—C5—H52108.00
O12—C11—C1119.25 (19)H61—C6—H62108.00
O21—C21—O22122.3 (2)C1—C6—H61109.00
O21—C21—C2125.2 (2)C1—C6—H62109.00
O22—C21—C2112.41 (19)C5—C6—H61109.00
C11—C1—H1106.00C5—C6—H62109.00
C2—C1—H1106.00
C6—C1—C2—C352.1 (2)C1—C2—C3—C4−54.1 (2)
C6—C1—C2—C21−72.7 (3)C21—C2—C3—C470.6 (3)
C11—C1—C2—C3−177.29 (17)C1—C2—C21—O21−7.1 (4)
C11—C1—C2—C2157.9 (2)C1—C2—C21—O22174.9 (2)
C2—C1—C6—C5−53.0 (3)C3—C2—C21—O21−131.9 (3)
C11—C1—C6—C5177.5 (2)C3—C2—C21—O2250.1 (3)
C2—C1—C11—O11−145.4 (2)C2—C3—C4—C556.3 (3)
C2—C1—C11—O1236.0 (3)C3—C4—C5—C6−56.4 (3)
C6—C1—C11—O11−16.4 (3)C4—C5—C6—C155.1 (3)
C6—C1—C11—O12165.0 (2)
D—H···AD—HH···AD···AD—H···A
N1—H1A···O110.90 (3)2.22 (3)3.012 (3)146 (3)
N1—H1A···O120.90 (3)2.44 (3)3.237 (3)147 (3)
N1—H1B···O12i0.91 (4)1.96 (4)2.835 (3)161 (4)
N1—H1C···O11ii0.97 (2)1.85 (3)2.811 (3)168 (2)
N1—H1D···O12iii0.99 (3)1.86 (3)2.842 (3)174 (3)
O22—H22···O11iv0.88 (4)1.76 (4)2.619 (3)165 (5)
C2—H2···O21v0.982.603.485 (3)150
C3—H32···O220.972.462.827 (4)102
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1A⋯O110.90 (3)2.22 (3)3.012 (3)146 (3)
N1—H1A⋯O120.90 (3)2.44 (3)3.237 (3)147 (3)
N1—H1B⋯O12i0.91 (4)1.96 (4)2.835 (3)161 (4)
N1—H1C⋯O11ii0.97 (2)1.85 (3)2.811 (3)168 (2)
N1—H1D⋯O12iii0.99 (3)1.86 (3)2.842 (3)174 (3)
O22—H22⋯O11iv0.88 (4)1.76 (4)2.619 (3)165 (5)

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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