| Literature DB >> 22058919 |
Abstract
In the crystal structure of the title mol-ecular adduct, C(9)H(7)N·C(8)H(12)O(4), the two species are -linked through a carb-oxy-lic acid-isoquinoline O-H⋯N hydrogen bond. These mol-ecular pairs then inter-associate through the second acid group of the cis-cyclo-hexane-1,2-dicarb-oxy-lic acid molecules, forming a classic centrosymmetric cyclic head-to-head carb-oxy-lic acid-carboxyl O-H⋯O hydrogen-bonding association [graph-set R(2) (2)(8)], giving a zero-dimensional (cluster) structure, consisting of two of each species.Entities:
Year: 2011 PMID: 22058919 PMCID: PMC3200759 DOI: 10.1107/S1600536811030613
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C9H7N·C8H12O4 | |
| Triclinic, | |
| Hall symbol: -P 1 | Melting point = 439–441 K |
| Mo | |
| Cell parameters from 4474 reflections | |
| θ = 3.3–28.7° | |
| α = 64.082 (5)° | µ = 0.10 mm−1 |
| β = 77.793 (4)° | |
| γ = 82.756 (4)° | Block, colourless |
| 0.40 × 0.28 × 0.20 mm |
| Oxford Diffraction Gemini-S CCD-detector diffractometer | 2952 independent reflections |
| Radiation source: Enhance (Mo) X-ray source | 2463 reflections with |
| graphite | |
| Detector resolution: 16.077 pixels mm-1 | θmax = 26.0°, θmin = 3.3° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 9094 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2952 reflections | (Δ/σ)max < 0.001 |
| 207 parameters | Δρmax = 0.17 e Å−3 |
| 0 restraints | Δρmin = −0.18 e Å−3 |
| Geometry. Bond distances, angles |
| Refinement. Refinement of |
| O11 | 0.70832 (16) | 1.07685 (11) | 0.86864 (10) | 0.0405 (4) | |
| O12 | 0.37261 (16) | 1.01881 (10) | 0.88359 (9) | 0.0371 (3) | |
| O21 | 0.49576 (18) | 0.88369 (10) | 0.70388 (12) | 0.0476 (4) | |
| O22 | 0.17799 (18) | 0.95466 (11) | 0.63667 (11) | 0.0468 (4) | |
| C1 | 0.5909 (2) | 1.13098 (13) | 0.67706 (12) | 0.0272 (4) | |
| C2 | 0.4067 (2) | 1.11424 (13) | 0.61893 (12) | 0.0272 (4) | |
| C3 | 0.1978 (2) | 1.19528 (13) | 0.63551 (13) | 0.0298 (4) | |
| C4 | 0.2466 (2) | 1.33837 (14) | 0.58905 (14) | 0.0338 (4) | |
| C5 | 0.4233 (2) | 1.35310 (13) | 0.65186 (13) | 0.0314 (4) | |
| C6 | 0.6329 (2) | 1.27692 (13) | 0.62795 (13) | 0.0309 (4) | |
| C11 | 0.5440 (2) | 1.06979 (12) | 0.81900 (13) | 0.0271 (4) | |
| C21 | 0.3661 (2) | 0.97179 (14) | 0.65964 (13) | 0.0308 (4) | |
| N2A | 0.1006 (2) | 0.70353 (12) | 0.71708 (12) | 0.0366 (4) | |
| C1A | 0.2157 (2) | 0.61693 (14) | 0.79877 (14) | 0.0343 (5) | |
| C3A | −0.0816 (3) | 0.66352 (15) | 0.69941 (14) | 0.0375 (5) | |
| C4A | −0.1451 (2) | 0.53805 (15) | 0.76063 (14) | 0.0357 (5) | |
| C5A | −0.0839 (3) | 0.31194 (15) | 0.92123 (15) | 0.0390 (5) | |
| C6A | 0.0362 (3) | 0.22778 (16) | 1.00839 (16) | 0.0434 (5) | |
| C7A | 0.2218 (3) | 0.26877 (16) | 1.02899 (15) | 0.0421 (5) | |
| C8A | 0.2845 (2) | 0.39437 (15) | 0.96060 (14) | 0.0365 (5) | |
| C9A | 0.1621 (2) | 0.48468 (14) | 0.87014 (13) | 0.0304 (4) | |
| C10A | −0.0255 (2) | 0.44335 (14) | 0.84987 (13) | 0.0303 (4) | |
| H1 | 0.72500 | 1.08880 | 0.64990 | 0.0410* | |
| H2 | 0.46140 | 1.14950 | 0.52810 | 0.0410* | |
| H11 | 0.669 (3) | 1.037 (2) | 0.959 (2) | 0.080 (7)* | |
| H22 | 0.158 (3) | 0.862 (2) | 0.663 (2) | 0.078 (6)* | |
| H31 | 0.09420 | 1.18840 | 0.58900 | 0.0450* | |
| H32 | 0.13100 | 1.16090 | 0.72380 | 0.0450* | |
| H41 | 0.29490 | 1.37600 | 0.49850 | 0.0510* | |
| H42 | 0.11370 | 1.38550 | 0.60730 | 0.0510* | |
| H51 | 0.37080 | 1.32150 | 0.74180 | 0.0470* | |
| H52 | 0.45410 | 1.44450 | 0.61900 | 0.0470* | |
| H61 | 0.74230 | 1.28670 | 0.66960 | 0.0460* | |
| H62 | 0.68990 | 1.31220 | 0.53830 | 0.0460* | |
| H1A | 0.34010 | 0.64420 | 0.81040 | 0.0410* | |
| H3A | −0.16580 | 0.72460 | 0.64320 | 0.0450* | |
| H4A | −0.26770 | 0.51450 | 0.74370 | 0.0430* | |
| H5A | −0.20530 | 0.28290 | 0.90850 | 0.0470* | |
| H6A | −0.00490 | 0.14190 | 1.05510 | 0.0520* | |
| H7A | 0.30170 | 0.21020 | 1.08930 | 0.0510* | |
| H8A | 0.40850 | 0.42070 | 0.97350 | 0.0440* |
| O11 | 0.0362 (6) | 0.0521 (7) | 0.0326 (6) | −0.0141 (5) | −0.0111 (5) | −0.0120 (5) |
| O12 | 0.0331 (6) | 0.0448 (6) | 0.0305 (5) | −0.0113 (5) | −0.0061 (4) | −0.0105 (5) |
| O21 | 0.0450 (6) | 0.0329 (6) | 0.0715 (8) | 0.0055 (5) | −0.0211 (6) | −0.0251 (6) |
| O22 | 0.0487 (7) | 0.0313 (6) | 0.0680 (8) | −0.0050 (5) | −0.0269 (6) | −0.0197 (6) |
| C1 | 0.0240 (7) | 0.0283 (7) | 0.0305 (7) | −0.0012 (5) | −0.0032 (5) | −0.0141 (6) |
| C2 | 0.0303 (7) | 0.0285 (7) | 0.0247 (7) | −0.0036 (6) | −0.0036 (5) | −0.0128 (6) |
| C3 | 0.0272 (7) | 0.0299 (7) | 0.0326 (7) | −0.0030 (6) | −0.0061 (6) | −0.0126 (6) |
| C4 | 0.0332 (7) | 0.0284 (7) | 0.0380 (8) | −0.0008 (6) | −0.0084 (6) | −0.0116 (6) |
| C5 | 0.0372 (8) | 0.0241 (7) | 0.0319 (7) | −0.0056 (6) | −0.0045 (6) | −0.0106 (6) |
| C6 | 0.0300 (7) | 0.0322 (8) | 0.0298 (7) | −0.0085 (6) | −0.0029 (6) | −0.0116 (6) |
| C11 | 0.0275 (7) | 0.0228 (7) | 0.0334 (7) | 0.0003 (5) | −0.0081 (6) | −0.0131 (6) |
| C21 | 0.0345 (7) | 0.0326 (8) | 0.0300 (7) | −0.0022 (6) | −0.0053 (6) | −0.0174 (6) |
| N2A | 0.0422 (7) | 0.0331 (7) | 0.0390 (7) | −0.0029 (5) | −0.0073 (6) | −0.0189 (6) |
| C1A | 0.0326 (8) | 0.0379 (8) | 0.0420 (8) | −0.0036 (6) | −0.0051 (6) | −0.0256 (7) |
| C3A | 0.0438 (9) | 0.0391 (8) | 0.0354 (8) | 0.0015 (7) | −0.0132 (7) | −0.0190 (7) |
| C4A | 0.0350 (8) | 0.0431 (9) | 0.0393 (8) | −0.0030 (6) | −0.0101 (6) | −0.0249 (7) |
| C5A | 0.0368 (8) | 0.0376 (8) | 0.0493 (9) | −0.0062 (6) | −0.0046 (7) | −0.0247 (8) |
| C6A | 0.0498 (10) | 0.0316 (8) | 0.0468 (9) | −0.0026 (7) | −0.0025 (8) | −0.0172 (7) |
| C7A | 0.0483 (9) | 0.0386 (9) | 0.0417 (9) | 0.0091 (7) | −0.0118 (7) | −0.0201 (7) |
| C8A | 0.0347 (8) | 0.0414 (9) | 0.0429 (9) | 0.0045 (6) | −0.0108 (7) | −0.0262 (7) |
| C9A | 0.0308 (7) | 0.0347 (8) | 0.0333 (7) | 0.0003 (6) | −0.0037 (6) | −0.0225 (6) |
| C10A | 0.0312 (7) | 0.0345 (8) | 0.0330 (7) | −0.0015 (6) | −0.0025 (6) | −0.0226 (6) |
| O11—C11 | 1.3175 (17) | C4—H41 | 0.9700 |
| O12—C11 | 1.2237 (17) | C5—H51 | 0.9700 |
| O21—C21 | 1.2082 (19) | C5—H52 | 0.9700 |
| O22—C21 | 1.3178 (18) | C6—H62 | 0.9700 |
| O11—H11 | 0.96 (2) | C6—H61 | 0.9700 |
| O22—H22 | 0.98 (2) | C1A—C9A | 1.415 (2) |
| N2A—C3A | 1.366 (2) | C3A—C4A | 1.361 (2) |
| N2A—C1A | 1.314 (2) | C4A—C10A | 1.413 (2) |
| C1—C2 | 1.5356 (19) | C5A—C6A | 1.361 (3) |
| C1—C11 | 1.5081 (19) | C5A—C10A | 1.415 (2) |
| C1—C6 | 1.543 (2) | C6A—C7A | 1.408 (3) |
| C2—C21 | 1.519 (2) | C7A—C8A | 1.365 (3) |
| C2—C3 | 1.532 (2) | C8A—C9A | 1.414 (2) |
| C3—C4 | 1.527 (2) | C9A—C10A | 1.420 (2) |
| C4—C5 | 1.5243 (19) | C1A—H1A | 0.9300 |
| C5—C6 | 1.525 (2) | C3A—H3A | 0.9300 |
| C1—H1 | 0.9800 | C4A—H4A | 0.9300 |
| C2—H2 | 0.9800 | C5A—H5A | 0.9300 |
| C3—H31 | 0.9700 | C6A—H6A | 0.9300 |
| C3—H32 | 0.9700 | C7A—H7A | 0.9300 |
| C4—H42 | 0.9700 | C8A—H8A | 0.9300 |
| C11—O11—H11 | 109.3 (12) | C6—C5—H51 | 110.00 |
| C21—O22—H22 | 110.7 (12) | C4—C5—H51 | 109.00 |
| C1A—N2A—C3A | 118.09 (14) | H51—C5—H52 | 108.00 |
| C2—C1—C6 | 110.04 (11) | C6—C5—H52 | 110.00 |
| C6—C1—C11 | 109.54 (12) | C1—C6—H61 | 109.00 |
| C2—C1—C11 | 113.10 (11) | C1—C6—H62 | 109.00 |
| C1—C2—C21 | 112.12 (11) | C5—C6—H62 | 109.00 |
| C3—C2—C21 | 113.55 (11) | H61—C6—H62 | 108.00 |
| C1—C2—C3 | 113.23 (12) | C5—C6—H61 | 109.00 |
| C2—C3—C4 | 111.43 (11) | N2A—C1A—C9A | 124.04 (13) |
| C3—C4—C5 | 111.18 (12) | N2A—C3A—C4A | 122.78 (15) |
| C4—C5—C6 | 110.73 (13) | C3A—C4A—C10A | 120.23 (14) |
| C1—C6—C5 | 111.33 (11) | C6A—C5A—C10A | 120.47 (17) |
| O11—C11—C1 | 112.94 (11) | C5A—C6A—C7A | 121.01 (17) |
| O12—C11—C1 | 124.77 (12) | C6A—C7A—C8A | 120.05 (16) |
| O11—C11—O12 | 122.29 (13) | C7A—C8A—C9A | 120.39 (14) |
| O22—C21—C2 | 112.83 (13) | C1A—C9A—C8A | 122.95 (13) |
| O21—C21—C2 | 123.78 (13) | C1A—C9A—C10A | 117.55 (13) |
| O21—C21—O22 | 123.33 (16) | C8A—C9A—C10A | 119.49 (14) |
| C2—C1—H1 | 108.00 | C4A—C10A—C5A | 124.13 (14) |
| C11—C1—H1 | 108.00 | C4A—C10A—C9A | 117.27 (14) |
| C6—C1—H1 | 108.00 | C5A—C10A—C9A | 118.58 (14) |
| C1—C2—H2 | 106.00 | N2A—C1A—H1A | 118.00 |
| C21—C2—H2 | 106.00 | C9A—C1A—H1A | 118.00 |
| C3—C2—H2 | 106.00 | N2A—C3A—H3A | 119.00 |
| C2—C3—H31 | 109.00 | C4A—C3A—H3A | 119.00 |
| C2—C3—H32 | 109.00 | C3A—C4A—H4A | 120.00 |
| C4—C3—H32 | 109.00 | C10A—C4A—H4A | 120.00 |
| H31—C3—H32 | 108.00 | C6A—C5A—H5A | 120.00 |
| C4—C3—H31 | 109.00 | C10A—C5A—H5A | 120.00 |
| C3—C4—H42 | 109.00 | C5A—C6A—H6A | 120.00 |
| C5—C4—H41 | 109.00 | C7A—C6A—H6A | 119.00 |
| C5—C4—H42 | 109.00 | C6A—C7A—H7A | 120.00 |
| H41—C4—H42 | 108.00 | C8A—C7A—H7A | 120.00 |
| C3—C4—H41 | 109.00 | C7A—C8A—H8A | 120.00 |
| C4—C5—H52 | 110.00 | C9A—C8A—H8A | 120.00 |
| C3A—N2A—C1A—C9A | −0.3 (2) | C3—C4—C5—C6 | 57.52 (15) |
| C1A—N2A—C3A—C4A | −1.4 (2) | C4—C5—C6—C1 | −58.31 (15) |
| C6—C1—C2—C3 | −52.58 (14) | N2A—C1A—C9A—C8A | −177.79 (15) |
| C11—C1—C2—C21 | −59.79 (16) | N2A—C1A—C9A—C10A | 1.2 (2) |
| C6—C1—C2—C21 | 177.35 (11) | N2A—C3A—C4A—C10A | 2.1 (3) |
| C11—C1—C2—C3 | 70.29 (16) | C3A—C4A—C10A—C5A | 177.60 (16) |
| C2—C1—C11—O11 | 175.82 (13) | C3A—C4A—C10A—C9A | −1.0 (2) |
| C2—C1—C11—O12 | −4.5 (2) | C10A—C5A—C6A—C7A | −0.5 (3) |
| C6—C1—C11—O11 | −61.03 (16) | C6A—C5A—C10A—C4A | −177.82 (16) |
| C6—C1—C11—O12 | 118.67 (16) | C6A—C5A—C10A—C9A | 0.8 (2) |
| C11—C1—C6—C5 | −69.79 (14) | C5A—C6A—C7A—C8A | −0.4 (3) |
| C2—C1—C6—C5 | 55.15 (14) | C6A—C7A—C8A—C9A | 1.0 (3) |
| C21—C2—C3—C4 | −178.03 (11) | C7A—C8A—C9A—C1A | 178.30 (16) |
| C1—C2—C3—C4 | 52.62 (15) | C7A—C8A—C9A—C10A | −0.7 (2) |
| C3—C2—C21—O21 | −148.08 (14) | C1A—C9A—C10A—C4A | −0.5 (2) |
| C3—C2—C21—O22 | 34.64 (16) | C1A—C9A—C10A—C5A | −179.24 (14) |
| C1—C2—C21—O21 | −18.2 (2) | C8A—C9A—C10A—C4A | 178.53 (14) |
| C1—C2—C21—O22 | 164.55 (12) | C8A—C9A—C10A—C5A | −0.2 (2) |
| C2—C3—C4—C5 | −54.27 (15) |
| H··· | ||||
| O11—H11···O12i | 0.96 (2) | 1.68 (2) | 2.6362 (14) | 171.7 (18) |
| O22—H22···N2A | 0.98 (2) | 1.69 (2) | 2.670 (2) | 174.5 (19) |
| C3—H32···O12 | 0.97 | 2.54 | 3.1126 (17) | 117 |
| C6—H61···O11 | 0.97 | 2.53 | 2.8841 (18) | 101 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O11—H11⋯O12i | 0.96 (2) | 1.68 (2) | 2.6362 (14) | 171.7 (18) |
| O22—H22⋯N2 | 0.98 (2) | 1.69 (2) | 2.670 (2) | 174.5 (19) |
Symmetry code: (i) .