Literature DB >> 21202717

Low-temperature redetermination of trans-cyclo-hexane-1,2-dicarboxylic acid.

Mohd Razali Rizal1, Seik Weng Ng.   

Abstract

The mol-ecule of the title compound, C(8)H(12)O(4), lies on a twofold rotation axis that passes through the mid-points of two opposite C-C bonds of the ring. Carboxyl groups of adjacent mol-ecules are linked by pairs of hydrogen bonds around a centre of inversion; this inter-action gives rise to a chain that runs along [101].

Entities:  

Year:  2008        PMID: 21202717      PMCID: PMC2961601          DOI: 10.1107/S1600536808012592

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

Studies on the metal derivatives of trans-1,2-cyclo­hexa­ne­dicarboxylic acid refer to the room-temperature structure of Benedetti et al. (1969 ▶). The absence of a preferred orientation (either axial or equatorial) of the carboxyl groups in cyclo­hexa­nedicarboxylic acids is discussed in the case of 1,3-cyclo­hexanedicarboxylic acid by van Koningsveld (1984 ▶). For the crystal structure of 1,4-cyclo­hexa­nedicarboxylic acid, see: Luger et al. (1972 ▶).

Experimental

Crystal data

C8H12O4 M = 172.18 Monoclinic, a = 5.585 (1) Å b = 13.840 (3) Å c = 10.035 (2) Å β = 96.114 (3)° V = 771.3 (3) Å3 Z = 4 Mo Kα radiation μ = 0.12 mm−1 T = 100 (2) K 0.38 × 0.06 × 0.04 mm

Data collection

Bruker SMART APEX diffractometer Absorption correction: none 2320 measured reflections 883 independent reflections 715 reflections with I > 2σ(I) R int = 0.035

Refinement

R[F 2 > 2σ(F 2)] = 0.042 wR(F 2) = 0.115 S = 1.07 883 reflections 59 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.31 e Å−3 Δρmin = −0.28 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: X-SEED (Barbour, 2001 ▶); software used to prepare material for publication: publCIF (Westrip, 2008 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808012592/cv2404sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808012592/cv2404Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C8H12O4F000 = 368
Mr = 172.18Dx = 1.483 Mg m3
Monoclinic, C2/cMo Kα radiation λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 739 reflections
a = 5.585 (1) Åθ = 3.6–28.2º
b = 13.840 (3) ŵ = 0.12 mm1
c = 10.035 (2) ÅT = 100 (2) K
β = 96.114 (3)ºStrip, colourless
V = 771.3 (3) Å30.38 × 0.06 × 0.04 mm
Z = 4
Bruker SMART APEX diffractometer715 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.035
Monochromator: graphiteθmax = 27.5º
T = 100(2) Kθmin = 2.9º
ω scansh = −7→7
Absorption correction: Nonek = −17→17
2320 measured reflectionsl = −13→8
883 independent reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.042H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.115  w = 1/[σ2(Fo2) + (0.0635P)2 + 0.2009P] where P = (Fo2 + 2Fc2)/3
S = 1.07(Δ/σ)max = 0.001
883 reflectionsΔρmax = 0.31 e Å3
59 parametersΔρmin = −0.28 e Å3
1 restraintExtinction correction: none
Primary atom site location: structure-invariant direct methods
xyzUiso*/Ueq
O10.0840 (2)0.1596 (1)0.0902 (1)0.0173 (3)
O20.4725 (2)0.1968 (1)0.0869 (1)0.0166 (3)
C10.3157 (3)0.1471 (1)0.1279 (2)0.0122 (3)
C20.3668 (2)0.0626 (1)0.2220 (2)0.0122 (4)
C30.2893 (3)−0.0314 (1)0.1475 (2)0.0139 (4)
C40.3647 (3)−0.1208 (1)0.2303 (2)0.0159 (4)
H1o0.068 (4)0.206 (1)0.035 (2)0.036 (6)*
H20.26760.07040.29860.015*
H3a0.1121−0.03150.12610.017*
H3b0.3626−0.03390.06200.017*
H4a0.2799−0.12180.31200.019*
H4b0.3184−0.17960.17760.019*
U11U22U33U12U13U23
O10.0124 (6)0.0179 (6)0.0205 (7)0.0008 (4)−0.0027 (5)0.0074 (5)
O20.0149 (6)0.0153 (6)0.0186 (6)−0.0017 (4)−0.0028 (4)0.0048 (4)
C10.0140 (7)0.0112 (7)0.0107 (8)0.0012 (5)−0.0025 (6)−0.0034 (6)
C20.0115 (7)0.0118 (7)0.0126 (8)0.0003 (5)−0.0025 (6)−0.0004 (6)
C30.0138 (7)0.0141 (7)0.0134 (8)−0.0013 (5)−0.0012 (6)−0.0014 (6)
C40.0170 (8)0.0109 (7)0.0190 (9)−0.0011 (5)−0.0012 (6)0.0003 (6)
O1—C11.321 (2)O1—H1o0.85 (1)
O2—C11.220 (2)C2—H21.0000
C1—C21.511 (2)C3—H3a0.9900
C2—C2i1.533 (3)C3—H3b0.9900
C2—C31.5397 (19)C4—H4a0.9900
C3—C41.523 (2)C4—H4b0.9900
C4—C4i1.521 (3)
O2—C1—O1123.1 (1)C3—C2—H2108.3
O2—C1—C2123.6 (1)C4—C3—H3a109.2
O1—C1—C2113.3 (1)C2—C3—H3a109.2
C1—C2—C2i109.9 (1)C4—C3—H3b109.2
C1—C2—C3109.0 (1)C2—C3—H3b109.2
C2i—C2—C3112.9 (1)H3a—C3—H3b107.9
C4—C3—C2112.0 (1)C4i—C4—H4a109.5
C4i—C4—C3110.5 (1)C3—C4—H4a109.5
C1—O1—H1o109 (1)C4i—C4—H4b109.5
C1—C2—H2108.3C3—C4—H4b109.5
C2i—C2—H2108.3H4a—C4—H4b108.1
O2—C1—C2—C2i11.2 (2)C1—C2—C3—C4172.7 (1)
O1—C1—C2—C2i−171.2 (1)C2i—C2—C3—C450.2 (2)
O2—C1—C2—C3−113.0 (2)C2—C3—C4—C4i−56.6 (2)
O1—C1—C2—C364.6 (2)
D—H···AD—HH···AD···AD—H···A
O1—H1o···O2ii0.85 (1)1.81 (1)2.662 (2)178 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1o⋯O2i0.85 (1)1.81 (1)2.662 (2)178 (2)

Symmetry code: (i) .

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