Literature DB >> 25877830

Glycan microarrays of fluorescently-tagged natural glycans.

Xuezheng Song1,2, Jamie Heimburg-Molinaro3,4, David F Smith3,4, Richard D Cummings3,4.   

Abstract

This review discusses the challenges facing research in 'functional glycomics' and the novel technologies that are being developed to advance the field. The structural complexity of glycans and glycoconjugates makes studies of both their structures and recognition difficult. However, these intricate structures can be captured from their natural sources, isolated and fluorescently-tagged for detailed structural analysis and for presentation on glycan microarrays for functional recognition by glycan-binding proteins. These advances in glycan preparation and manipulation enable the streamlining of functional glycomics studies and will help to propel the field forward in studying natural, biologically relevant glycans.

Entities:  

Keywords:  Functional Glycomics; Glycan microarray; Glycans; Natural glycans; Shotgun glycomics

Mesh：

Substances：

Year:  2015        PMID： 25877830      PMCID： PMC4607549          DOI： 10.1007/s10719-015-9584-8

Source DB:  PubMed          Journal:  Glycoconj J        ISSN： 0282-0080            Impact factor:   2.916


  81 in total

1.  Purification and characterization of membrane-bound endoglycoceramidase from Corynebacterium sp.

Authors:  H Ashida; K Yamamoto; H Kumagai; T Tochikura
Journal:  Eur J Biochem       Date:  1992-04-15

2.  Structural analysis of glycans by NMR chemical shift prediction.

Authors:  Magnus Lundborg; Göran Widmalm
Journal:  Anal Chem       Date:  2011-01-31       Impact factor: 6.986

3.  Partial purification and characterization of an endo-alpha-N-acetylgalactosaminidase from the culture of medium of Diplococcus pneumoniae.

Authors:  Y Endo; A Kobata
Journal:  J Biochem       Date:  1976-07       Impact factor: 3.387

4.  Versatile fluorescent derivatization of glycans for glycomic analysis.

Authors:  Baoyun Xia; Ziad S Kawar; Tongzhong Ju; Richard A Alvarez; Goverdhan P Sachdev; Richard D Cummings
Journal:  Nat Methods       Date:  2005-11       Impact factor: 28.547

Review 5.  Use of glycan microarrays to explore specificity of glycan-binding proteins.

Authors:  David F Smith; Xuezheng Song; Richard D Cummings
Journal:  Methods Enzymol       Date:  2010       Impact factor: 1.600

6.  Hydrazinolysis of alpha-1-acid glycoprotein.

Authors:  Z Yosizawa; T Sato; K Schmid
Journal:  Biochim Biophys Acta       Date:  1966-06-29

Review 7.  Glycan microarrays for decoding the glycome.

Authors:  Cory D Rillahan; James C Paulson
Journal:  Annu Rev Biochem       Date:  2011       Impact factor: 23.643

Review 8.  Sweet spots in functional glycomics.

Authors:  James C Paulson; Ola Blixt; Brian E Collins
Journal:  Nat Chem Biol       Date:  2006-05       Impact factor: 15.040

9.  Novel fluorescent glycan microarray strategy reveals ligands for galectins.

Authors:  Xuezheng Song; Baoyun Xia; Sean R Stowell; Yi Lasanajak; David F Smith; Richard D Cummings
Journal:  Chem Biol       Date:  2009-01-30

10.  Novel strategy to release and tag N-glycans for functional glycomics.

Authors:  Xuezheng Song; Hong Ju; Chunmei Zhao; Yi Lasanajak
Journal:  Bioconjug Chem       Date:  2014-10-04       Impact factor: 4.774
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  9 in total

1.  Profiling Anti-Neu5Gc IgG in Human Sera with a Sialoglycan Microarray Assay.

Authors:  Shani Leviatan Ben-Arye; Hai Yu; Xi Chen; Vered Padler-Karavani
Journal:  J Vis Exp       Date:  2017-07-13       Impact factor: 1.355

2.  Glycan Array Technology.

Authors:  Juana Elizabeth Reyes Martinez; Baptiste Thomas; Sabine Lahja Flitsch
Journal:  Adv Biochem Eng Biotechnol       Date:  2021       Impact factor: 2.635

3.  Factors contributing to variability of glycan microarray binding profiles.

Authors:  J Sebastian Temme; Christopher T Campbell; Jeffrey C Gildersleeve
Journal:  Faraday Discuss       Date:  2019-10-30       Impact factor: 4.394

Review 4.  Preparation of Complex Glycans From Natural Sources for Functional Study.

Authors:  Qing Zhang; Zhonghua Li; Xuezheng Song
Journal:  Front Chem       Date:  2020-07-03       Impact factor: 5.221

Review 5.  Natural and Synthetic Sialylated Glycan Microarrays and Their Applications.

Authors:  Alyssa M McQuillan; Lauren Byrd-Leotis; Jamie Heimburg-Molinaro; Richard D Cummings
Journal:  Front Mol Biosci       Date:  2019-09-13

Review 6.  Glycan Microarrays as Chemical Tools for Identifying Glycan Recognition by Immune Proteins.

Authors:  Chao Gao; Mohui Wei; Tanya R McKitrick; Alyssa M McQuillan; Jamie Heimburg-Molinaro; Richard D Cummings
Journal:  Front Chem       Date:  2019-12-13       Impact factor: 5.221

7.  Ultrasensitive detection of influenza viruses with a glycan-based impedimetric biosensor.

Authors:  András Hushegyi; Dominika Pihíková; Tomas Bertok; Vojtech Adam; René Kizek; Jan Tkac
Journal:  Biosens Bioelectron       Date:  2015-12-30       Impact factor: 10.618

Review 8.  Emerging glycobiology tools: A renaissance in accessibility.

Authors:  Douglas M Oswald; Brian A Cobb
Journal:  Cell Immunol       Date:  2018-04-25       Impact factor: 4.178

Review 9.  Tools for generating and analyzing glycan microarray data.

Authors:  Akul Y Mehta; Jamie Heimburg-Molinaro; Richard D Cummings
Journal:  Beilstein J Org Chem       Date:  2020-09-10       Impact factor: 2.883
  9 in total

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