Literature DB >> 21462983

Conversion of fatty aldehydes to alka(e)nes and formate by a cyanobacterial aldehyde decarbonylase: cryptic redox by an unusual dimetal oxygenase.

Ning Li1, Hanne Nørgaard, Douglas M Warui, Squire J Booker, Carsten Krebs, J Martin Bollinger.   

Abstract

Cyanobacterial aldehyde decarbonylase (AD) catalyzes conversion of fatty aldehydes (R-CHO) to alka(e)nes (R-H) and formate. Curiously, although this reaction appears to be redox-neutral and formally hydrolytic, AD has a ferritin-like protein architecture and a carboxylate-bridged dimetal cofactor that are both structurally similar to those found in di-iron oxidases and oxygenases. In addition, the in vitro activity of the AD from Nostoc punctiforme (Np) was shown to require a reducing system similar to the systems employed by these O(2)-utilizing di-iron enzymes. Here, we resolve this conundrum by showing that aldehyde cleavage by the Np AD also requires dioxygen and results in incorporation of (18)O from (18)O(2) into the formate product. AD thus oxygenates, without oxidizing, its substrate. We posit that (i) O(2) adds to the reduced cofactor to generate a metal-bound peroxide nucleophile that attacks the substrate carbonyl and initiates a radical scission of the C1-C2 bond, and (ii) the reducing system delivers two electrons during aldehyde cleavage, ensuring a redox-neutral outcome, and two additional electrons to return an oxidized form of the cofactor back to the reduced, O(2)-reactive form.

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Year:  2011        PMID: 21462983      PMCID: PMC3113487          DOI: 10.1021/ja2013517

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  33 in total

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2.  (Mu-1,2-peroxo)diiron(III/III) complex as a precursor to the diiron(III/IV) intermediate X in the assembly of the iron-radical cofactor of ribonucleotide reductase from mouse.

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Journal:  Biochemistry       Date:  2007-01-27       Impact factor: 3.162

3.  Biofuels. ExxonMobil fuels Venter's efforts to run vehicles on algae-based oil.

Authors:  Robert F Service
Journal:  Science       Date:  2009-07-24       Impact factor: 47.728

4.  Three-dimensional structure of the free radical protein of ribonucleotide reductase.

Authors:  P Nordlund; B M Sjöberg; H Eklund
Journal:  Nature       Date:  1990-06-14       Impact factor: 49.962

Review 5.  Cyanobacterial alkane biosynthesis further expands the catalytic repertoire of the ferritin-like 'di-iron-carboxylate' proteins.

Authors:  Carsten Krebs; J Martin Bollinger; Squire J Booker
Journal:  Curr Opin Chem Biol       Date:  2011-04       Impact factor: 8.822

6.  Ferric superoxide and ferric hydroxide are used in the catalytic mechanism of hydroxyethylphosphonate dioxygenase: a density functional theory investigation.

Authors:  Hajime Hirao; Keiji Morokuma
Journal:  J Am Chem Soc       Date:  2010-12-01       Impact factor: 15.419

7.  Dioxygen Activation and Methane Hydroxylation by Soluble Methane Monooxygenase: A Tale of Two Irons and Three Proteins A list of abbreviations can be found in Section 7.

Authors:  Maarten Merkx; Daniel A. Kopp; Matthew H. Sazinsky; Jessica L. Blazyk; Jens Müller; Stephen J. Lippard
Journal:  Angew Chem Int Ed Engl       Date:  2001-08-03       Impact factor: 15.336

8.  Iron and free radical in ribonucleotide reductase. Exchange of iron and Mössbauer spectroscopy of the protein B2 subunit of the Escherichia coli enzyme.

Authors:  C L Atkin; L Thelander; P Reichard; G Lang
Journal:  J Biol Chem       Date:  1973-11-10       Impact factor: 5.157

9.  Characterization of the arene-oxidizing intermediate in ToMOH as a diiron(III) species.

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Journal:  J Am Chem Soc       Date:  2007-10-30       Impact factor: 15.419

10.  YfaE, a ferredoxin involved in diferric-tyrosyl radical maintenance in Escherichia coli ribonucleotide reductase.

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Journal:  Biochemistry       Date:  2007-09-20       Impact factor: 3.162

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  42 in total

1.  Oxygen-independent alkane formation by non-heme iron-dependent cyanobacterial aldehyde decarbonylase: investigation of kinetics and requirement for an external electron donor.

Authors:  Bekir E Eser; Debasis Das; Jaehong Han; Patrik R Jones; E Neil G Marsh
Journal:  Biochemistry       Date:  2011-11-15       Impact factor: 3.162

2.  A comparison of two-electron chemistry performed by the manganese and iron heterodimer and homodimers.

Authors:  Katarina Roos; Per E M Siegbahn
Journal:  J Biol Inorg Chem       Date:  2011-11-15       Impact factor: 3.358

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Journal:  Plant Cell       Date:  2012-07-06       Impact factor: 11.277

Review 4.  Dioxygen Activation by Nonheme Diiron Enzymes: Diverse Dioxygen Adducts, High-Valent Intermediates, and Related Model Complexes.

Authors:  Andrew J Jasniewski; Lawrence Que
Journal:  Chem Rev       Date:  2018-02-05       Impact factor: 60.622

5.  An unusual peroxo intermediate of the arylamine oxygenase of the chloramphenicol biosynthetic pathway.

Authors:  Thomas M Makris; Van V Vu; Katlyn K Meier; Anna J Komor; Brent S Rivard; Eckard Münck; Lawrence Que; John D Lipscomb
Journal:  J Am Chem Soc       Date:  2015-01-21       Impact factor: 15.419

6.  Conversion of Aldehyde to Alkane by a Peroxoiron(III) Complex: A Functional Model for the Cyanobacterial Aldehyde-Deformylating Oxygenase.

Authors:  Alireza Shokri; Lawrence Que
Journal:  J Am Chem Soc       Date:  2015-06-10       Impact factor: 15.419

Review 7.  Microbial production of fatty acid-derived fuels and chemicals.

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Journal:  Curr Opin Biotechnol       Date:  2013-03-28       Impact factor: 9.740

8.  Evidence for a Di-μ-oxo Diamond Core in the Mn(IV)/Fe(IV) Activation Intermediate of Ribonucleotide Reductase from Chlamydia trachomatis.

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Journal:  J Am Chem Soc       Date:  2017-01-27       Impact factor: 15.419

9.  A high-valent heterobimetallic [Cu(III)(μ-O)2Ni(III)]2+ core with nucleophilic oxo groups.

Authors:  Subrata Kundu; Florian Felix Pfaff; Enrico Miceli; Ivelina Zaharieva; Christian Herwig; Shenglai Yao; Erik R Farquhar; Uwe Kuhlmann; Eckhard Bill; Peter Hildebrandt; Holger Dau; Matthias Driess; Christian Limberg; Kallol Ray
Journal:  Angew Chem Int Ed Engl       Date:  2013-04-15       Impact factor: 15.336

Review 10.  Integrating mass spectrometry and genomics for cyanobacterial metabolite discovery.

Authors:  Nathan A Moss; Matthew J Bertin; Karin Kleigrewe; Tiago F Leão; Lena Gerwick; William H Gerwick
Journal:  J Ind Microbiol Biotechnol       Date:  2015-11-17       Impact factor: 3.346

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