Literature DB >> 21451870

Hydroxylation of methylated CpG dinucleotides reverses stabilisation of DNA duplexes by cytosine 5-methylation.

Armin Thalhammer1, Anders S Hansen, Afaf H El-Sagheer, Tom Brown, Christopher J Schofield.   

Abstract

Cytosine-5-methylation stabilises DNA duplexes and is associated with transcriptional repression; 5-methylcytosine undergoes hydroxylation to 5-hydroxymethylcytosine, a modification of unknown biological function. Spectroscopic and calorimetric analyses show that 5-hydroxymethylcytosine introduction reverses the stabilising effect of 5-methylcytosine, suggesting that in some contexts, 5-methylcytosine hydroxylation may, along with other factors, contribute to the alleviation of transcriptional repression. © The Royal Society of Chemistry 2011

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Year:  2011        PMID: 21451870     DOI: 10.1039/c0cc05671e

Source DB:  PubMed          Journal:  Chem Commun (Camb)        ISSN: 1359-7345            Impact factor:   6.222


  29 in total

1.  Integrative analysis of methylome and transcriptome in human blood identifies extensive sex- and immune cell-specific differentially methylated regions.

Authors:  Shimrat Mamrut; Nili Avidan; Elsebeth Staun-Ram; Elizabeta Ginzburg; Frederique Truffault; Sonia Berrih-Aknin; Ariel Miller
Journal:  Epigenetics       Date:  2015       Impact factor: 4.528

Review 2.  The curious chemical biology of cytosine: deamination, methylation, and oxidation as modulators of genomic potential.

Authors:  Christopher S Nabel; Sara A Manning; Rahul M Kohli
Journal:  ACS Chem Biol       Date:  2011-10-31       Impact factor: 5.100

3.  Oxidized Derivatives of 5-Methylcytosine Alter the Stability and Dehybridization Dynamics of Duplex DNA.

Authors:  Paul J Sanstead; Brennan Ashwood; Qing Dai; Chuan He; Andrei Tokmakoff
Journal:  J Phys Chem B       Date:  2020-02-05       Impact factor: 2.991

4.  Comparison of DNA and RNA substrate effects on TET2 structure.

Authors:  Emmett M Leddin; G Andrés Cisneros
Journal:  Adv Protein Chem Struct Biol       Date:  2019-06-11       Impact factor: 3.507

Review 5.  5-hydroxymethylcytosine: a new insight into epigenetics in cancer.

Authors:  Chao Ye; Lan Li
Journal:  Cancer Biol Ther       Date:  2013-11-19       Impact factor: 4.742

Review 6.  Emerging roles of epigenetic mechanisms in Parkinson's disease.

Authors:  Ehsan Habibi; Ali Masoudi-Nejad; Hamid Mostafavi Abdolmaleky; Stephen J Haggarty
Journal:  Funct Integr Genomics       Date:  2011-09-04       Impact factor: 3.410

Review 7.  TETonic shift: biological roles of TET proteins in DNA demethylation and transcription.

Authors:  William A Pastor; L Aravind; Anjana Rao
Journal:  Nat Rev Mol Cell Biol       Date:  2013-06       Impact factor: 94.444

Review 8.  TET proteins in natural and induced differentiation.

Authors:  James P Scott-Browne; Chan-Wang J Lio; Anjana Rao
Journal:  Curr Opin Genet Dev       Date:  2017-09-06       Impact factor: 5.578

9.  The correlation of genome size and DNA methylation rate in metazoans.

Authors:  Marcus Lechner; Manja Marz; Christian Ihling; Andrea Sinz; Peter F Stadler; Veiko Krauss
Journal:  Theory Biosci       Date:  2012-11-07       Impact factor: 1.919

10.  bZIP Dimers CREB1, ATF2, Zta, ATF3|cJun, and cFos|cJun Prefer to Bind to Some Double-Stranded DNA Sequences Containing 5-Formylcytosine and 5-Carboxylcytosine.

Authors:  Sreejana Ray; Desiree Tillo; Aniekanabasi Ufot; Nima Assad; Stewart Durell; Charles Vinson
Journal:  Biochemistry       Date:  2020-09-20       Impact factor: 3.162

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