Literature DB >> 24253310

5-hydroxymethylcytosine: a new insight into epigenetics in cancer.

Chao Ye1, Lan Li1.   

Abstract

DNA methylation at the 5 position of cytosine (5-mC) has emerged as a key epigenetic marker that plays essential roles in various biological and pathological processes. 5-mC can be converted to 5-hydroxymethylcytosine (5-hmC) by the ten-eleven translocation (TET) family proteins, which is now widely recognized as the "sixth base" in the mammalian genome, following 5-mC, the "fifth base". 5-hmC is detected to be abundant in brain and embryonic stem cells, and is also distributed in many different human tissues. Emerging evidence has shown that 5-hmC and TET family might serve unique biological roles in many biological processes such as gene control mechanisms, DNA methylation regulation, and involved in many diseases, especially cancers. In this paper we provide an overview of the role of 5-hmC as a new sight of epigenetics in human cancer.

Entities:  

Keywords:  5-hmC; DNA methylation; TET; cancer; epigenetics

Mesh:

Substances:

Year:  2013        PMID: 24253310      PMCID: PMC3938512          DOI: 10.4161/cbt.27144

Source DB:  PubMed          Journal:  Cancer Biol Ther        ISSN: 1538-4047            Impact factor:   4.742


  67 in total

Review 1.  Genomic imprinting syndromes and cancer.

Authors:  Derek Hock Kiat Lim; Eamonn Richard Maher
Journal:  Adv Genet       Date:  2010       Impact factor: 1.944

2.  TET1, a member of a novel protein family, is fused to MLL in acute myeloid leukemia containing the t(10;11)(q22;q23).

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Journal:  Leukemia       Date:  2003-03       Impact factor: 11.528

Review 3.  Detection and interpretation of altered methylation patterns in cancer cells.

Authors:  Toshikazu Ushijima
Journal:  Nat Rev Cancer       Date:  2005-03       Impact factor: 60.716

4.  Inhibition of TET2-mediated conversion of 5-methylcytosine to 5-hydroxymethylcytosine disturbs erythroid and granulomonocytic differentiation of human hematopoietic progenitors.

Authors:  Elodie Pronier; Carole Almire; Hayat Mokrani; Aparna Vasanthakumar; Audrey Simon; Barbara da Costa Reis Monte Mor; Aline Massé; Jean-Pierre Le Couédic; Frédéric Pendino; Bruno Carbonne; Jérôme Larghero; Jean-Luc Ravanat; Nicole Casadevall; Olivier A Bernard; Nathalie Droin; Eric Solary; Lucy A Godley; William Vainchenker; Isabelle Plo; François Delhommeau
Journal:  Blood       Date:  2011-07-06       Impact factor: 22.113

Review 5.  The epigenomics of cancer.

Authors:  Peter A Jones; Stephen B Baylin
Journal:  Cell       Date:  2007-02-23       Impact factor: 41.582

6.  Endogenous cytosine damage products alter the site selectivity of human DNA maintenance methyltransferase DNMT1.

Authors:  Victoria Valinluck; Lawrence C Sowers
Journal:  Cancer Res       Date:  2007-02-01       Impact factor: 12.701

Review 7.  Epigenetic changes in cancer.

Authors:  Kirsten Grønbaek; Christoffer Hother; Peter A Jones
Journal:  APMIS       Date:  2007-10       Impact factor: 3.205

Review 8.  Tet family proteins and 5-hydroxymethylcytosine in development and disease.

Authors:  Li Tan; Yujiang Geno Shi
Journal:  Development       Date:  2012-06       Impact factor: 6.868

9.  Decreased 5-hydroxymethylcytosine is associated with neural progenitor phenotype in normal brain and shorter survival in malignant glioma.

Authors:  Brent A Orr; Michael C Haffner; William G Nelson; Srinivasan Yegnasubramanian; Charles G Eberhart
Journal:  PLoS One       Date:  2012-07-19       Impact factor: 3.240

10.  Distribution of 5-hydroxymethylcytosine in different human tissues.

Authors:  Weiwei Li; Min Liu
Journal:  J Nucleic Acids       Date:  2011-06-09
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  21 in total

1.  Arsenite Targets the Zinc Finger Domains of Tet Proteins and Inhibits Tet-Mediated Oxidation of 5-Methylcytosine.

Authors:  Shuo Liu; Ji Jiang; Lin Li; Nicholas J Amato; Zi Wang; Yinsheng Wang
Journal:  Environ Sci Technol       Date:  2015-09-23       Impact factor: 9.028

2.  Selective inhibition of CTCF binding by iAs directs TET-mediated reprogramming of 5-hydroxymethylation patterns in iAs-transformed cells.

Authors:  Matthew Rea; Tyler Gripshover; Yvonne Fondufe-Mittendorf
Journal:  Toxicol Appl Pharmacol       Date:  2017-11-22       Impact factor: 4.219

Review 3.  Effects of ionizing radiation on DNA methylation: from experimental biology to clinical applications.

Authors:  Isabelle R Miousse; Kristy R Kutanzi; Igor Koturbash
Journal:  Int J Radiat Biol       Date:  2017-02-21       Impact factor: 2.694

4.  Pol β gap filling, DNA ligation and substrate-product channeling during base excision repair opposite oxidized 5-methylcytosine modifications.

Authors:  Melike Çağlayan
Journal:  DNA Repair (Amst)       Date:  2020-08-14

5.  Low level of 5-Hydroxymethylcytosine predicts poor prognosis in non-small cell lung cancer.

Authors:  Yunfei Liao; Jie Gu; Yongbing Wu; Xiang Long; D I Ge; Jianjun Xu; Jianyong Ding
Journal:  Oncol Lett       Date:  2016-04-19       Impact factor: 2.967

Review 6.  Melatonin, noncoding RNAs, messenger RNA stability and epigenetics--evidence, hints, gaps and perspectives.

Authors:  Rüdiger Hardeland
Journal:  Int J Mol Sci       Date:  2014-10-10       Impact factor: 5.923

7.  High levels of 5-hydroxymethylcytosine (5hmC) is an adverse predictor of biochemical recurrence after prostatectomy in ERG-negative prostate cancer.

Authors:  Siri H Strand; Soren Hoyer; Anne-Sofie Lynnerup; Christa Haldrup; Tine Maj Storebjerg; Michael Borre; Torben F Orntoft; Karina D Sorensen
Journal:  Clin Epigenetics       Date:  2015-10-15       Impact factor: 6.551

8.  Genome-wide 5-hydroxymethylcytosine modification pattern is a novel epigenetic feature of globozoospermia.

Authors:  Xiu-Xia Wang; Bao-Fa Sun; Jiao Jiao; Ze-Chen Chong; Yu-Shen Chen; Xiao-Li Wang; Yue Zhao; Yi-Ming Zhou; Da Li
Journal:  Oncotarget       Date:  2015-03-30

Review 9.  Epigenetics and male reproduction: the consequences of paternal lifestyle on fertility, embryo development, and children lifetime health.

Authors:  Liborio Stuppia; Marica Franzago; Patrizia Ballerini; Valentina Gatta; Ivana Antonucci
Journal:  Clin Epigenetics       Date:  2015-11-11       Impact factor: 6.551

10.  Filtrating colorectal cancer associated genes by integrated analyses of global DNA methylation and hydroxymethylation in cancer and normal tissue.

Authors:  Ming Li; Fei Gao; Yudong Xia; Yi Tang; Wei Zhao; Congcong Jin; Huijuan Luo; Junwen Wang; Qingshu Li; Yalan Wang
Journal:  Sci Rep       Date:  2016-08-22       Impact factor: 4.379

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