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Literature DB >> 28888139

TET proteins in natural and induced differentiation.

James P Scott-Browne¹, Chan-Wang J Lio², Anjana Rao³.

Abstract

The ten-eleven-translocation (TET) proteins oxidize 5-methylcytosine in DNA. Alterations in TET protein function have been linked to cancer, but TETs have also been observed to influence many cell differentiation processes. Here we review recent work assessing the contribution of TET proteins to natural and induced differentiation. Altogether these analyses have helped characterize how TETs and their enzymatic products influence DNA methylation patterns, regulatory element activity, DNA binding protein specificity and gene expression.

Entities: Chemical Disease Gene Species

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Year: 2017 PMID： 28888139 PMCID： PMC6033320 DOI： 10.1016/j.gde.2017.07.011

Source DB: PubMed Journal: Curr Opin Genet Dev ISSN： 0959-437X Impact factor: 5.578

74 in total

1. Activation of immunoglobulin kappa gene rearrangement correlates with induction of germline kappa gene transcription.

Authors: M S Schlissel; D Baltimore
Journal: Cell Date: 1989-09-08 Impact factor: 41.582

2. TET proteins regulate the lineage specification and TCR-mediated expansion of iNKT cells.

Authors: Ageliki Tsagaratou; Edahí González-Avalos; Sini Rautio; James P Scott-Browne; Susan Togher; William A Pastor; Ellen V Rothenberg; Lukas Chavez; Harri Lähdesmäki; Anjana Rao
Journal: Nat Immunol Date: 2016-11-21 Impact factor: 25.606

3. Integrative Analyses of Human Reprogramming Reveal Dynamic Nature of Induced Pluripotency.

Authors: Davide Cacchiarelli; Cole Trapnell; Michael J Ziller; Magali Soumillon; Marcella Cesana; Rahul Karnik; Julie Donaghey; Zachary D Smith; Sutheera Ratanasirintrawoot; Xiaolan Zhang; Shannan J Ho Sui; Zhaoting Wu; Veronika Akopian; Casey A Gifford; John Doench; John L Rinn; George Q Daley; Alexander Meissner; Eric S Lander; Tarjei S Mikkelsen
Journal: Cell Date: 2015-07-16 Impact factor: 41.582

4. Simultaneous deletion of the methylcytosine oxidases Tet1 and Tet3 increases transcriptome variability in early embryogenesis.

Authors: Jinsuk Kang; Matthias Lienhard; William A Pastor; Ashu Chawla; Mark Novotny; Ageliki Tsagaratou; Roger S Lasken; Elizabeth C Thompson; M Azim Surani; Sergei B Koralov; Sundeep Kalantry; Lukas Chavez; Anjana Rao
Journal: Proc Natl Acad Sci U S A Date: 2015-07-21 Impact factor: 11.205

5. Early-stage epigenetic modification during somatic cell reprogramming by Parp1 and Tet2.

Authors: Claudia A Doege; Keiichi Inoue; Toru Yamashita; David B Rhee; Skylar Travis; Ryousuke Fujita; Paolo Guarnieri; Govind Bhagat; William B Vanti; Alan Shih; Ross L Levine; Sara Nik; Emily I Chen; Asa Abeliovich
Journal: Nature Date: 2012-08-30 Impact factor: 49.962

Review 6. DNA methylation and hydroxymethylation in hematologic differentiation and transformation.

Authors: Myunggon Ko; Jungeun An; Anjana Rao
Journal: Curr Opin Cell Biol Date: 2015-11-18 Impact factor: 8.382

7. Distinct roles of the methylcytosine oxidases Tet1 and Tet2 in mouse embryonic stem cells.

Authors: Yun Huang; Lukas Chavez; Xing Chang; Xue Wang; William A Pastor; Jinsuk Kang; Jorge A Zepeda-Martínez; Utz J Pape; Steven E Jacobsen; Bjoern Peters; Anjana Rao
Journal: Proc Natl Acad Sci U S A Date: 2014-01-13 Impact factor: 11.205

8. Control of Foxp3 stability through modulation of TET activity.

Authors: Xiaojing Yue; Sara Trifari; Tarmo Äijö; Ageliki Tsagaratou; William A Pastor; Jorge A Zepeda-Martínez; Chan-Wang J Lio; Xiang Li; Yun Huang; Pandurangan Vijayanand; Harri Lähdesmäki; Anjana Rao
Journal: J Exp Med Date: 2016-02-22 Impact factor: 14.307

9. Vitamin C induces Tet-dependent DNA demethylation and a blastocyst-like state in ES cells.

Authors: Kathryn Blaschke; Kevin T Ebata; Mohammad M Karimi; Jorge A Zepeda-Martínez; Preeti Goyal; Sahasransu Mahapatra; Angela Tam; Diana J Laird; Martin Hirst; Anjana Rao; Matthew C Lorincz; Miguel Ramalho-Santos
Journal: Nature Date: 2013-06-30 Impact factor: 49.962

10. Acute loss of TET function results in aggressive myeloid cancer in mice.

Authors: Jungeun An; Edahí González-Avalos; Ashu Chawla; Mira Jeong; Isaac F López-Moyado; Wei Li; Margaret A Goodell; Lukas Chavez; Myunggon Ko; Anjana Rao
Journal: Nat Commun Date: 2015-11-26 Impact factor: 14.919

14 in total

1. TET2 mediated demethylation is involved in the protective effect of triptolide on podocytes.

Authors: Feng Wan; Yue-Wen Tang; Xuan-Li Tang; Ya-Yu Li; Ru-Chun Yang
Journal: Am J Transl Res Date: 2021-03-15 Impact factor: 4.060

2. TET enzymes augment activation-induced deaminase (AID) expression via 5-hydroxymethylcytosine modifications at the Aicda superenhancer.

Authors: Chan-Wang J Lio; Vipul Shukla; Daniela Samaniego-Castruita; Edahi González-Avalos; Abhijit Chakraborty; Xiaojing Yue; David G Schatz; Ferhat Ay; Anjana Rao
Journal: Sci Immunol Date: 2019-04-26

3. Unusual Activity of a Chlamydomonas TET/JBP Family Enzyme.

Authors: L Aravind; Shankar Balasubramanian; Anjana Rao
Journal: Biochemistry Date: 2019-08-22 Impact factor: 3.162

4. Acute deletion of TET enzymes results in aneuploidy in mouse embryonic stem cells through decreased expression of Khdc3.

Authors: Romain O Georges; Hugo Sepulveda; J Carlos Angel; Eric Johnson; Susan Palomino; Roberta B Nowak; Arshad Desai; Isaac F López-Moyado; Anjana Rao
Journal: Nat Commun Date: 2022-10-20 Impact factor: 17.694