Literature DB >> 21451513

Profiling metabolites and peptides in single cells.

Stanislav S Rubakhin1, Elena V Romanova, Peter Nemes, Jonathan V Sweedler.   

Abstract

The intracellular levels and spatial localizations of metabolites and peptides reflect the state of a cell and its relationship to its surrounding environment. Moreover, the amounts and dynamics of metabolites and peptides are indicative of normal or pathological cellular conditions. Here we highlight established and evolving strategies for characterizing the metabolome and peptidome of single cells. Focused studies of the chemical composition of individual cells and functionally defined groups of cells promise to provide a greater understanding of cell fate, function and homeostatic balance. Single-cell bioanalytical microanalysis has also become increasingly valuable for examining cellular heterogeneity, particularly in the fields of neuroscience, stem cell biology and developmental biology.

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Year:  2011        PMID: 21451513      PMCID: PMC3312877          DOI: 10.1038/nmeth.1549

Source DB:  PubMed          Journal:  Nat Methods        ISSN: 1548-7091            Impact factor:   28.547


  89 in total

1.  A single-cell matrix-assisted laser desorption/ionization time-of-flight mass-spectroscopic assay of the cell-maturation process.

Authors:  Masakazu Shimizu; Francesca Levi-Schaffer; Noriyuki Ojima; Tomoteru Shingaki; Tsutomu Masujima
Journal:  Anal Sci       Date:  2002-02       Impact factor: 2.081

2.  Microfluidic devices for the high-throughput chemical analysis of cells.

Authors:  Maxine A McClain; Christopher T Culbertson; Stephen C Jacobson; Nancy L Allbritton; Christopher E Sims; J Michael Ramsey
Journal:  Anal Chem       Date:  2003-11-01       Impact factor: 6.986

3.  Nanomechanical mass sensing and stiffness spectrometry based on two-dimensional vibrations of resonant nanowires.

Authors:  Eduardo Gil-Santos; Daniel Ramos; Javier Martínez; Marta Fernández-Regúlez; Ricardo García; Alvaro San Paulo; Montserrat Calleja; Javier Tamayo
Journal:  Nat Nanotechnol       Date:  2010-08-08       Impact factor: 39.213

Review 4.  Recent advances in the application of capillary electrophoresis to neuroscience.

Authors:  Paula R Powell; Andrew G Ewing
Journal:  Anal Bioanal Chem       Date:  2005-02-23       Impact factor: 4.142

5.  Multiple ionization mass spectrometry strategy used to reveal the complexity of metabolomics.

Authors:  Anders Nordström; Elizabeth Want; Trent Northen; Janne Lehtiö; Gary Siuzdak
Journal:  Anal Chem       Date:  2007-12-18       Impact factor: 6.986

6.  Matrix vapor deposition/recrystallization and dedicated spray preparation for high-resolution scanning microprobe matrix-assisted laser desorption/ionization imaging mass spectrometry (SMALDI-MS) of tissue and single cells.

Authors:  Werner Bouschen; Oliver Schulz; Daniel Eikel; Bernhard Spengler
Journal:  Rapid Commun Mass Spectrom       Date:  2010-02       Impact factor: 2.419

7.  Vitamin E imaging and localization in the neuronal membrane.

Authors:  Eric B Monroe; John C Jurchen; Jinju Lee; Stanislav S Rubakhin; Jonathan V Sweedler
Journal:  J Am Chem Soc       Date:  2005-09-07       Impact factor: 15.419

8.  Microelectrophoresis platform for fast serial analysis of single cells.

Authors:  Dechen Jiang; Christopher E Sims; Nancy L Allbritton
Journal:  Electrophoresis       Date:  2010-08       Impact factor: 3.535

9.  Metabolic monitoring of the electrically stimulated single heart cell within a microfluidic platform.

Authors:  Wei Cheng; Norbert Klauke; Helen Sedgwick; Godfrey L Smith; Jonathan M Cooper
Journal:  Lab Chip       Date:  2006-09-14       Impact factor: 6.799

10.  Neuropeptidomics of the supraoptic rat nucleus.

Authors:  Adriana Bora; Suresh P Annangudi; Larry J Millet; Stanislav S Rubakhin; Andrew J Forbes; Neil L Kelleher; Martha U Gillette; Jonathan V Sweedler
Journal:  J Proteome Res       Date:  2008-09-25       Impact factor: 4.466

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  119 in total

Review 1.  A vision for a biomedical cloud.

Authors:  R L Grossman; K P White
Journal:  J Intern Med       Date:  2012-02       Impact factor: 8.989

2.  Sampling techniques for single-cell electrophoresis.

Authors:  Christine Cecala; Jonathan V Sweedler
Journal:  Analyst       Date:  2012-01-30       Impact factor: 4.616

3.  Therapeutic peptide production in Drosophila.

Authors:  Dongkook Park; Xiaowen Hou; Jonathan V Sweedler; Paul H Taghert
Journal:  Peptides       Date:  2012-05-15       Impact factor: 3.750

4.  Mass Spectrometry Measurement of Single Suspended Cells Using a Combined Cell Manipulation System and a Single-Probe Device.

Authors:  Shawna J Standke; Devon H Colby; Ryan C Bensen; Anthony W G Burgett; Zhibo Yang
Journal:  Anal Chem       Date:  2019-01-18       Impact factor: 6.986

5.  Stimulation and release from neurons via a dual capillary collection device interfaced to mass spectrometry.

Authors:  Yi Fan; Chang Young Lee; Stanislav S Rubakhin; Jonathan V Sweedler
Journal:  Analyst       Date:  2013-11-07       Impact factor: 4.616

6.  In Situ Microprobe Single-Cell Capillary Electrophoresis Mass Spectrometry: Metabolic Reorganization in Single Differentiating Cells in the Live Vertebrate (Xenopus laevis) Embryo.

Authors:  Rosemary M Onjiko; Erika P Portero; Sally A Moody; Peter Nemes
Journal:  Anal Chem       Date:  2017-05-01       Impact factor: 6.986

7.  Optically Guided Single Cell Mass Spectrometry of Rat Dorsal Root Ganglia to Profile Lipids, Peptides and Proteins.

Authors:  Thanh D Do; Joseph F Ellis; Elizabeth K Neumann; Troy J Comi; Emily G Tillmaand; Ashley E Lenhart; Stanislav S Rubakhin; Jonathan V Sweedler
Journal:  Chemphyschem       Date:  2018-04-17       Impact factor: 3.102

8.  Newly Identified Aplysia SPTR-Gene Family-Derived Peptides: Localization and Function.

Authors:  Guo Zhang; Wang-Ding Yuan; Ferdinand S Vilim; Elena V Romanova; Ke Yu; Si-Yuan Yin; Zi-Wei Le; Ying-Yu Xue; Ting-Ting Chen; Guo-Kai Chen; Song-An Chen; Elizabeth C Cropper; Jonathan V Sweedler; Klaudiusz R Weiss; Jian Jing
Journal:  ACS Chem Neurosci       Date:  2018-03-27       Impact factor: 4.418

Review 9.  Lipidomics: Techniques, Applications, and Outcomes Related to Biomedical Sciences.

Authors:  Kui Yang; Xianlin Han
Journal:  Trends Biochem Sci       Date:  2016-09-20       Impact factor: 13.807

10.  Deciphering Metabolic Heterogeneity by Single-Cell Analysis.

Authors:  Tom M J Evers; Mazène Hochane; Sander J Tans; Ron M A Heeren; Stefan Semrau; Peter Nemes; Alireza Mashaghi
Journal:  Anal Chem       Date:  2019-10-08       Impact factor: 6.986

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