Literature DB >> 21443620

Organisation of the plant genome in chromosomes.

J S Pat Heslop-Harrison1, Trude Schwarzacher.   

Abstract

The plant genome is organized into chromosomes that provide the structure for the genetic linkage groups and allow faithful replication, transcription and transmission of the hereditary information. Genome sizes in plants are remarkably diverse, with a 2350-fold range from 63 to 149,000 Mb, divided into n=2 to n= approximately 600 chromosomes. Despite this huge range, structural features of chromosomes like centromeres, telomeres and chromatin packaging are well-conserved. The smallest genomes consist of mostly coding and regulatory DNA sequences present in low copy, along with highly repeated rDNA (rRNA genes and intergenic spacers), centromeric and telomeric repetitive DNA and some transposable elements. The larger genomes have similar numbers of genes, with abundant tandemly repeated sequence motifs, and transposable elements alone represent more than half the DNA present. Chromosomes evolve by fission, fusion, duplication and insertion events, allowing evolution of chromosome size and chromosome number. A combination of sequence analysis, genetic mapping and molecular cytogenetic methods with comparative analysis, all only becoming widely available in the 21st century, is elucidating the exact nature of the chromosome evolution events at all timescales, from the base of the plant kingdom, to intraspecific or hybridization events associated with recent plant breeding. As well as being of fundamental interest, understanding and exploiting evolutionary mechanisms in plant genomes is likely to be a key to crop development for food production.
© 2011 The Authors. The Plant Journal © 2011 Blackwell Publishing Ltd.

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Year:  2011        PMID: 21443620     DOI: 10.1111/j.1365-313X.2011.04544.x

Source DB:  PubMed          Journal:  Plant J        ISSN: 0960-7412            Impact factor:   6.417


  77 in total

Review 1.  Structural and functional liaisons between transposable elements and satellite DNAs.

Authors:  Nevenka Meštrović; Brankica Mravinac; Martina Pavlek; Tanja Vojvoda-Zeljko; Eva Šatović; Miroslav Plohl
Journal:  Chromosome Res       Date:  2015-09       Impact factor: 5.239

Review 2.  Dynamics of sex expression and chromosome diversity in Cucurbitaceae: a story in the making.

Authors:  Biplab Kumar Bhowmick; Sumita Jha
Journal:  J Genet       Date:  2015-12       Impact factor: 1.166

3.  Nucleosomes and centromeric DNA packaging.

Authors:  J S Pat Heslop-Harrison; Trude Schwarzacher
Journal:  Proc Natl Acad Sci U S A       Date:  2013-11-26       Impact factor: 11.205

4.  A novel satellite DNA isolated in Pecten jacobaeus shows high sequence similarity among molluscs.

Authors:  Agnese Petraccioli; Gaetano Odierna; Teresa Capriglione; Marco Barucca; Mariko Forconi; Ettore Olmo; Maria Assunta Biscotti
Journal:  Mol Genet Genomics       Date:  2015-04-02       Impact factor: 3.291

5.  The large genome size variation in the Hesperis clade was shaped by the prevalent proliferation of DNA repeats and rarer genome downsizing.

Authors:  Petra Hloušková; Terezie Mandáková; Milan Pouch; Pavel Trávníček; Martin A Lysak
Journal:  Ann Bot       Date:  2019-08-02       Impact factor: 4.357

6.  Intra- and interchromosomal rearrangements between cowpea [Vigna unguiculata (L.) Walp.] and common bean (Phaseolus vulgaris L.) revealed by BAC-FISH.

Authors:  Emanuelle Varão Vasconcelos; Artur Fellipe de Andrade Fonsêca; Andrea Pedrosa-Harand; Kyria Cilene de Andrade Bortoleti; Ana Maria Benko-Iseppon; Antônio Félix da Costa; Ana Christina Brasileiro-Vidal
Journal:  Chromosome Res       Date:  2015-01-30       Impact factor: 5.239

7.  Characterization of aneuploidy in interspecific hybrid between Urochloa ruziziensis (R. Germ. & Evrard) Crins and Urochloa decumbens (Stapf) R. D. Webster.

Authors:  Isabella de Campos Moraes; Gabriel de Campos Rume; Fausto Souza Sobrinho; Vânia Helena Techio
Journal:  Mol Biol Rep       Date:  2019-02-01       Impact factor: 2.316

8.  Size and location of radish chromosome regions carrying the fertility restorer Rfk1 gene in spring turnip rape.

Authors:  Tarja Niemelä; Mervi Seppänen; Farah Badakshi; Veli-Matti Rokka; J S Pat Heslop-Harrison
Journal:  Chromosome Res       Date:  2012-04-03       Impact factor: 5.239

9.  Absence of positive selection on CenH3 in Luzula suggests that holokinetic chromosomes may suppress centromere drive.

Authors:  František Zedek; Petr Bureš
Journal:  Ann Bot       Date:  2016-09-10       Impact factor: 4.357

10.  Intraspecific and intraorganismal copy number dynamics of retrotransposons and tandem repeat in Aegilops speltoides Tausch (Poaceae, Triticeae).

Authors:  Imad Shams; Olga Raskina
Journal:  Protoplasma       Date:  2018-01-27       Impact factor: 3.356

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