Literature DB >> 21440685

Intrinsically disordered proteins may escape unwanted interactions via functional misfolding.

Vladimir N Uversky1.   

Abstract

Intrinsically disordered proteins are highly abundant in nature and play a number of crucial roles in the living cells. They are commonly involved in a wide range of intermolecular interactions, and some of them possess remarkable binding promiscuity, being able to interact specifically with structurally unrelated partners. Although they do not have well-folded structure, some IDPs are known to fold at binding to their specific partners. IDPs are highly pliable and one IDP can form an array of unrelated structures being bound to different partners. It is believed that many IDPs, being mostly disordered, have transient elements of the preformed secondary structure which are highly interaction prone and is used by IDPs for binding to specific partners. The overall disordered nature of IDPs, their high conformational dynamics and flexibility, the presence of sticky preformed binding elements, and their ability to morph into differently-shaped bound configurations raised a very important question about the mechanisms preventing IDPs from unwanted interactions with non-native partners. In this review, a concept of functional misfolding is introduced. Accumulated to date data on the conformational behavior and fine structure of several IDPs suggest that the preformed binding elements might be involved in a set of non-native intramolecular interactions. In other words, there is a chance that a polypeptide chain misfolds to sequester the preformed elements inside the non-interactive or less-interactive cage, therefore preventing these elements from the unnecessary and unwanted interactions with non-native binding partners.
Copyright © 2011 Elsevier B.V. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2011        PMID: 21440685     DOI: 10.1016/j.bbapap.2011.03.010

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  23 in total

1.  Distinct hydration properties of wild-type and familial point mutant A53T of α-synuclein associated with Parkinson's disease.

Authors:  E Hazy; M Bokor; L Kalmar; A Gelencser; P Kamasa; K-H Han; K Tompa; P Tompa
Journal:  Biophys J       Date:  2011-11-01       Impact factor: 4.033

2.  Plasticity in structural and functional interactions between the phosphoprotein and nucleoprotein of measles virus.

Authors:  Yaoling Shu; Johnny Habchi; Stéphanie Costanzo; André Padilla; Joanna Brunel; Denis Gerlier; Michael Oglesbee; Sonia Longhi
Journal:  J Biol Chem       Date:  2012-02-08       Impact factor: 5.157

Review 3.  Intrinsically disordered proteins in crowded milieu: when chaos prevails within the cellular gumbo.

Authors:  Alexander V Fonin; April L Darling; Irina M Kuznetsova; Konstantin K Turoverov; Vladimir N Uversky
Journal:  Cell Mol Life Sci       Date:  2018-07-31       Impact factor: 9.261

Review 4.  Protein intrinsic disorder as a flexible armor and a weapon of HIV-1.

Authors:  Bin Xue; Marcin J Mizianty; Lukasz Kurgan; Vladimir N Uversky
Journal:  Cell Mol Life Sci       Date:  2011-10-28       Impact factor: 9.261

5.  The designability of protein switches by chemical rescue of structure: mechanisms of inactivation and reactivation.

Authors:  Yan Xia; Nina DiPrimio; Theodore R Keppel; Binh Vo; Keith Fraser; Kevin P Battaile; Chet Egan; Christopher Bystroff; Scott Lovell; David D Weis; J Christopher Anderson; John Karanicolas
Journal:  J Am Chem Soc       Date:  2013-12-06       Impact factor: 15.419

6.  Structural landscape of the proline-rich domain of Sos1 nucleotide exchange factor.

Authors:  Caleb B McDonald; Vikas Bhat; Dmitry Kurouski; David C Mikles; Brian J Deegan; Kenneth L Seldeen; Igor K Lednev; Amjad Farooq
Journal:  Biophys Chem       Date:  2013-03-05       Impact factor: 2.352

7.  Free cysteine modulates the conformation of human C/EBP homologous protein.

Authors:  Vinay K Singh; Mona N Rahman; Kim Munro; Vladimir N Uversky; Steven P Smith; Zongchao Jia
Journal:  PLoS One       Date:  2012-04-04       Impact factor: 3.240

8.  Evolutionary Insights into the Microneme-Secreted, Chitinase-Containing High-Molecular-Weight Protein Complexes Involved in Plasmodium Invasion of the Mosquito Midgut.

Authors:  Hargobinder Kaur; M Andreina Pacheco; Laine Garber; Ananias A Escalante; Joseph M Vinetz
Journal:  Infect Immun       Date:  2021-10-04       Impact factor: 3.609

Review 9.  A decade and a half of protein intrinsic disorder: biology still waits for physics.

Authors:  Vladimir N Uversky
Journal:  Protein Sci       Date:  2013-04-29       Impact factor: 6.725

10.  Ligand clouds around protein clouds: a scenario of ligand binding with intrinsically disordered proteins.

Authors:  Fan Jin; Chen Yu; Luhua Lai; Zhirong Liu
Journal:  PLoS Comput Biol       Date:  2013-10-03       Impact factor: 4.475

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.