Literature DB >> 21412566

Small-molecule fluorescent probes for specific RNA targets.

Asako Murata1, Shin-ichi Sato, Yoshinori Kawazoe, Motonari Uesugi.   

Abstract

A method was developed that uses small molecules as fluorescent probes to detect specific mRNAs. In this approach, the fluorescence of fluorophore-quencher conjugates is restored by the binding of an mRNA aptamer tag to the quencher segment of the molecules. The method allows real-time detection of mRNA transcripts in vitro. © The Royal Society of Chemistry 2011

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Year:  2011        PMID: 21412566     DOI: 10.1039/c1cc10393h

Source DB:  PubMed          Journal:  Chem Commun (Camb)        ISSN: 1359-7345            Impact factor:   6.222


  16 in total

1.  Dual-colour imaging of RNAs using quencher- and fluorophore-binding aptamers.

Authors:  Ankita Arora; Murat Sunbul; Andres Jäschke
Journal:  Nucleic Acids Res       Date:  2015-07-14       Impact factor: 16.971

Review 2.  Aptamer-based molecular imaging.

Authors:  Tianjiao Wang; Judhajeet Ray
Journal:  Protein Cell       Date:  2012-09-15       Impact factor: 14.870

Review 3.  Illuminating RNA Biology: Tools for Imaging RNA in Live Mammalian Cells.

Authors:  Esther Braselmann; Colin Rathbun; Erin M Richards; Amy E Palmer
Journal:  Cell Chem Biol       Date:  2020-07-07       Impact factor: 8.116

4.  SRB-2: a promiscuous rainbow aptamer for live-cell RNA imaging.

Authors:  Murat Sunbul; Andres Jäschke
Journal:  Nucleic Acids Res       Date:  2018-10-12       Impact factor: 16.971

Review 5.  "Second-generation" fluorogenic RNA-based sensors.

Authors:  Aruni P K K Karunanayake Mudiyanselage; Rigumula Wu; Mark A Leon-Duque; Kewei Ren; Mingxu You
Journal:  Methods       Date:  2019-01-17       Impact factor: 3.608

6.  A strategy to enhance the binding affinity of fluorophore-aptamer pairs for RNA tagging with neomycin conjugation.

Authors:  Jongho Jeon; Kyung Hyun Lee; Jianghong Rao
Journal:  Chem Commun (Camb)       Date:  2012-10-14       Impact factor: 6.222

Review 7.  Aptamers as Modular Components of Therapeutic Nucleic Acid Nanotechnology.

Authors:  Martin Panigaj; M Brittany Johnson; Weina Ke; Jessica McMillan; Ekaterina A Goncharova; Morgan Chandler; Kirill A Afonin
Journal:  ACS Nano       Date:  2019-11-05       Impact factor: 15.881

Review 8.  Genetically encoded RNA nanodevices for cellular imaging and regulation.

Authors:  Qikun Yu; Kewei Ren; Mingxu You
Journal:  Nanoscale       Date:  2021-05-06       Impact factor: 7.790

9.  Confocal and Super-resolution Imaging of RNA in Live Bacteria Using a Fluorogenic Silicon Rhodamine-binding Aptamer.

Authors:  Regina Wirth; Peng Gao; G Ulrich Nienhaus; Murat Sunbul; Andres Jäschke
Journal:  Bio Protoc       Date:  2020-05-05

10.  Challenges and opportunities for small molecule aptamer development.

Authors:  Maureen McKeague; Maria C Derosa
Journal:  J Nucleic Acids       Date:  2012-10-24
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