Literature DB >> 21369930

Halogen bond tunability I: the effects of aromatic fluorine substitution on the strengths of halogen-bonding interactions involving chlorine, bromine, and iodine.

Kevin E Riley1, Jane S Murray, Jindřich Fanfrlík, Jan Rezáč, Ricardo J Solá, Monica C Concha, Felix M Ramos, Peter Politzer.   

Abstract

In the past several years, halogen bonds have been shown to be relevant in crystal engineering and biomedical applications. One of the reasons for the utility of these types of noncovalent interactions in the development of, for example, pharmaceutical ligands is that their strengths and geometric properties are very tunable. That is, substitution of atoms or chemical groups in the vicinity of a halogen can have a very strong effect on the strength of the halogen bond. In this study we investigate halogen-bonding interactions involving aromatically-bound halogens (Cl, Br, and I) and a carbonyl oxygen. The properties of these halogen bonds are modulated by substitution of aromatic hydrogens with fluorines, which are very electronegative. It is found that these types of substitutions have dramatic effects on the strengths of the halogen bonds, leading to interactions that can be up to 100% stronger. Very good correlations are obtained between the interaction energies and the magnitudes of the positive electrostatic potentials (σ-holes) on the halogens. Interestingly, it is seen that the substitution of fluorines in systems containing smaller halogens results in electrostatic potentials resembling those of systems with larger halogens, with correspondingly stronger interaction energies. It is also shown that aromatic fluorine substitutions affect the optimal geometries of the halogen-bonded complexes, often as the result of secondary interactions.

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Year:  2011        PMID: 21369930     DOI: 10.1007/s00894-011-1015-6

Source DB:  PubMed          Journal:  J Mol Model        ISSN: 0948-5023            Impact factor:   1.810


  16 in total

1.  Quantitative analysis of molecular surfaces: areas, volumes, electrostatic potentials and average local ionization energies.

Authors:  Felipe A Bulat; Alejandro Toro-Labbé; Tore Brinck; Jane S Murray; Peter Politzer
Journal:  J Mol Model       Date:  2010-04-02       Impact factor: 1.810

2.  The halogen bond: an interim perspective.

Authors:  Anthony C Legon
Journal:  Phys Chem Chem Phys       Date:  2010-05-21       Impact factor: 3.676

3.  Ab initio calculations on halogen-bonded complexes and comparison with density functional methods.

Authors:  Yun-Xiang Lu; Jian-Wei Zou; Ji-Cai Fan; Wen-Na Zhao; Yong-Jun Jiang; Qing-Sen Yu
Journal:  J Comput Chem       Date:  2009-04-15       Impact factor: 3.376

4.  Halogen bonding: an electrostatically-driven highly directional noncovalent interaction.

Authors:  Peter Politzer; Jane S Murray; Timothy Clark
Journal:  Phys Chem Chem Phys       Date:  2010-06-22       Impact factor: 3.676

5.  Halogen bonding: the sigma-hole. Proceedings of "Modeling interactions in biomolecules II", Prague, September 5th-9th, 2005.

Authors:  Timothy Clark; Matthias Hennemann; Jane S Murray; Peter Politzer
Journal:  J Mol Model       Date:  2006-08-23       Impact factor: 1.810

6.  Halogen bonds in biological molecules.

Authors:  Pascal Auffinger; Franklin A Hays; Eric Westhof; P Shing Ho
Journal:  Proc Natl Acad Sci U S A       Date:  2004-11-19       Impact factor: 11.205

7.  An ab initio investigation of the interactions involving the aromatic group of the set of fluorinated N-(4-sulfamylbenzoyl)benzylamine inhibitors and human carbonic anhydrase II.

Authors:  Kevin E Riley; Guanglei Cui; Kenneth M Merz
Journal:  J Phys Chem B       Date:  2007-05-03       Impact factor: 2.991

8.  Halogen bonding--a novel interaction for rational drug design?

Authors:  Yunxiang Lu; Ting Shi; Yong Wang; Huaiyu Yang; Xiuhua Yan; Xiaoming Luo; Hualiang Jiang; Weiliang Zhu
Journal:  J Med Chem       Date:  2009-05-14       Impact factor: 7.446

Review 9.  The role of halogen bonding in inhibitor recognition and binding by protein kinases.

Authors:  Andrea Regier Voth; P Shing Ho
Journal:  Curr Top Med Chem       Date:  2007       Impact factor: 3.295

10.  Br···O Complexes as Probes of Factors Affecting Halogen Bonding: Interactions of Bromobenzenes and Bromopyrimidines with Acetone.

Authors:  Kevin E Riley; Jane S Murray; Peter Politzer; Monica C Concha; Pavel Hobza
Journal:  J Chem Theory Comput       Date:  2008-12-18       Impact factor: 6.006

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  53 in total

1.  Polarization-induced σ-holes and hydrogen bonding.

Authors:  Matthias Hennemann; Jane S Murray; Peter Politzer; Kevin E Riley; Timothy Clark
Journal:  J Mol Model       Date:  2011-10-21       Impact factor: 1.810

2.  Halogen bond tunability II: the varying roles of electrostatic and dispersion contributions to attraction in halogen bonds.

Authors:  Kevin E Riley; Jane S Murray; Jindřich Fanfrlík; Jan Rezáč; Ricardo J Solá; Monica C Concha; Felix M Ramos; Peter Politzer
Journal:  J Mol Model       Date:  2012-05-29       Impact factor: 1.810

3.  CNXeCl and CNXeBr species as halogen bond donors: a quantum chemical study on the structure, properties, and nature of halogen···nitrogen interactions.

Authors:  Mehdi D Esrafili; Parisa Juyban
Journal:  J Mol Model       Date:  2014-03-29       Impact factor: 1.810

4.  Enhancing the hydrogen bond between the bridged hydrogen atom of diborane and ammonia.

Authors:  Lei Gao; Xueying Zhang; Lingpeng Meng; Yanli Zeng
Journal:  J Mol Model       Date:  2015-08-14       Impact factor: 1.810

5.  Revealing substitution effects on the strength and nature of halogen-hydride interactions: a theoretical study.

Authors:  Mehdi D Esrafili; Mohammad Solimannejad
Journal:  J Mol Model       Date:  2013-06-23       Impact factor: 1.810

6.  Cooperativity between fluorine-centered halogen bonds: investigation of substituent effects.

Authors:  Mehdi D Esrafili; Mehdi D Esraili; Fariba Mohammadian-Sabet; Parvin Esmailpour; Mohammad Solimannejad
Journal:  J Mol Model       Date:  2013-10-27       Impact factor: 1.810

7.  Pnictogen bonding in pyrazine•PnX5 (Pn = P, As, Sb and X = F, Cl, Br) complexes.

Authors:  Jindřich Fanfrlík; Wiktor Zierkiewicz; Petr Švec; Zdeňka Růžičková; Jan Řezáč; Mariusz Michalczyk; Aleš Růžička; Danuta Michalska; Pavel Hobza
Journal:  J Mol Model       Date:  2017-10-30       Impact factor: 1.810

8.  Treatment of Halogen Bonding in the OPLS-AA Force Field; Application to Potent Anti-HIV Agents.

Authors:  William L Jorgensen; Patric Schyman
Journal:  J Chem Theory Comput       Date:  2012-04-03       Impact factor: 6.006

Review 9.  Halogen bonding (X-bonding): a biological perspective.

Authors:  Matthew R Scholfield; Crystal M Vander Zanden; Megan Carter; P Shing Ho
Journal:  Protein Sci       Date:  2012-12-29       Impact factor: 6.725

10.  Computational study on C-H...π interactions of acetylene with benzene, 1,3,5-trifluorobenzene and coronene.

Authors:  Tandabany C Dinadayalane; Guvanchmyrat Paytakov; Jerzy Leszczynski
Journal:  J Mol Model       Date:  2012-12-18       Impact factor: 1.810

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