Literature DB >> 29086098

Pnictogen bonding in pyrazine•PnX5 (Pn = P, As, Sb and X = F, Cl, Br) complexes.

Jindřich Fanfrlík1, Wiktor Zierkiewicz2, Petr Švec3, Zdeňka Růžičková3, Jan Řezáč4, Mariusz Michalczyk5, Aleš Růžička6, Danuta Michalska5, Pavel Hobza7,8.   

Abstract

This paper presents a study of pnictogen bonding in a series of pyrazine•PnX5 (Pn = P, As, Sb and X = F, Cl, Br) complexes. The whole series was studied computationally. Moreover, the pyrazine complexes with PCl5 and SbCl5 were prepared and characterized experimentally. It was found that the Pn-N distances are only slightly elongated when compared to the sum of covalent radii. The conformation of PnX5 changed considerably upon the complex formation, which resulted in a significant change of the dipole moment of the PnX5 fragment and a considerably more positive σ-hole on the pnictogen atom. Finally, interaction energies were decomposed in order to provide a deeper insight into the nature of the studied pnictogen-bonded complexes. Graphical abstract The conformation of PnX5 changed considerably upon the complex formation, which resulted in a considerably more positive σ-hole on the pnictogen atom.

Entities:  

Keywords:  Charge transfer; Deformation energy; Interaction energy decomposition; Pnictogen bond; X-ray crystallography; σ-hole magnitude

Year:  2017        PMID: 29086098     DOI: 10.1007/s00894-017-3502-x

Source DB:  PubMed          Journal:  J Mol Model        ISSN: 0948-5023            Impact factor:   1.810


  38 in total

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Authors:  Janet E Del Bene; Ibon Alkorta; Goar Sanchez-Sanz; José Elguero
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Journal:  Phys Chem Chem Phys       Date:  2011-10-13       Impact factor: 3.676

4.  Synthesis and characterization of two isomeric, self-assembled arsenic-thiolate macrocycles.

Authors:  W Jake Vickaryous; Elisabeth Rather Healey; Orion B Berryman; Darren W Johnson
Journal:  Inorg Chem       Date:  2005-12-12       Impact factor: 5.165

5.  Sigma-hole bonding between like atoms; a fallacy of atomic charges.

Authors:  Peter Politzer; Jane S Murray; Monica C Concha
Journal:  J Mol Model       Date:  2008-03-04       Impact factor: 1.810

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Authors:  Timothy Clark; Matthias Hennemann; Jane S Murray; Peter Politzer
Journal:  J Mol Model       Date:  2006-08-23       Impact factor: 1.810

7.  A comprehensive analysis of P···π pnicogen bonds: substitution effects and comparison with Br···π halogen bonds.

Authors:  Cuicui Liu; Yanli Zeng; Xiaoyan Li; Lingpeng Meng; Xueying Zhang
Journal:  J Mol Model       Date:  2015-05-17       Impact factor: 1.810

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Authors:  Pekka Pyykkö; Michiko Atsumi
Journal:  Chemistry       Date:  2009       Impact factor: 5.236

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Authors:  Mohammed G Sarwar; Bojan Dragisic; Lee J Salsberg; Christina Gouliaras; Mark S Taylor
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10.  Properties of complexes H2C═(X)P:PXH2, for X = F, Cl, OH, CN, NC, CCH, H, CH3, and BH2: P···P pnicogen bonding at σ-holes and π-holes.

Authors:  Janet E Del Bene; Ibon Alkorta; José Elguero
Journal:  J Phys Chem A       Date:  2013-11-04       Impact factor: 2.781

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  5 in total

1.  Pnictogen, chalcogen, and halogen bonds in catalytic systems: theoretical study and detailed comparison.

Authors:  Ling Lu; Yunxiang Lu; Zhengdan Zhu; Honglai Liu
Journal:  J Mol Model       Date:  2019-12-20       Impact factor: 1.810

Review 2.  The Pnictogen Bond: The Covalently Bound Arsenic Atom in Molecular Entities in Crystals as a Pnictogen Bond Donor.

Authors:  Arpita Varadwaj; Pradeep R Varadwaj; Helder M Marques; Koichi Yamashita
Journal:  Molecules       Date:  2022-05-25       Impact factor: 4.927

Review 3.  The Stibium Bond or the Antimony-Centered Pnictogen Bond: The Covalently Bound Antimony Atom in Molecular Entities in Crystal Lattices as a Pnictogen Bond Donor.

Authors:  Arpita Varadwaj; Pradeep R Varadwaj; Helder M Marques; Koichi Yamashita
Journal:  Int J Mol Sci       Date:  2022-04-23       Impact factor: 6.208

4.  Involvement of Arsenic Atom of AsF3 in Five Pnicogen Bonds: Differences between X-ray Structure and Theoretical Models.

Authors:  Steve Scheiner; Mariusz Michalczyk; Wiktor Zierkiewicz
Journal:  Molecules       Date:  2022-10-01       Impact factor: 4.927

5.  Comparison between Tetrel Bonded Complexes Stabilized by σ and π Hole Interactions.

Authors:  Wiktor Zierkiewicz; Mariusz Michalczyk; Steve Scheiner
Journal:  Molecules       Date:  2018-06-11       Impact factor: 4.411

  5 in total

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