Literature DB >> 21361780

Gene expression analysis in radiotherapy patients and C57BL/6 mice as a measure of exposure to ionizing radiation.

Ashley N Filiano1, Hassan M Fathallah-Shaykh, John Fiveash, Jarrod Gage, Alan Cantor, Sandhya Kharbanda, Martin R Johnson.   

Abstract

Dose assessment after radiological disasters is imperative to decrease mortality through rationally directed medical intervention. Our goal was to identify biomarkers capable of qualitative (nonirradiated/irradiated) and/or quantitative (dose) assessment of radiation exposure. Using real-time quantitative PCR, biodosimetry genes were identified in blood samples from cancer patients undergoing total-body irradiation. Time- (5, 12, 23, 48 h) and dose- (0-8 Gy) dependent changes in gene expression were examined in C57BL/6 mice. A training set was used to derive weighted voting classification algorithms (nonirradiated/irradiated) and continuous regression (dose assessment) models that were tested in a separate validation set of mice. Of eight biodosimetry genes identified in cancer patients ( ACTA2 , BBC3 , CCNG1 , CDKN1A , GADD45A , MDK , SERPINE1 , Tnfrsf10b ), expression of BBC3 , CCNG1 , CDKN1A , SERPINE1 and Tnfrsf10b was significantly (P < 0.05) increased in irradiated mice. CCNG1 and CDKN1A expression segregated irradiated mice from controls with an accuracy, specificity and sensitivity of 96.3, 100.0 and 94.4%, respectively, at 48 h. Multiple linear regression analysis predicted doses for the 0-, 1-, 2-, 4-, 6- and 8-Gy treatment groups as 0.0 ± 0.2, 1.6 ± 1.0, 2.9 ± 1.4, 5.1 ± 2.0, 5.3 ± 0.7 and 10.5 ± 5.6 Gy, respectively. These results suggest that gene expression analysis could be incorporated into biodosimetry protocols for qualitative and quantitative assessment of radiation exposure.

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Year:  2011        PMID: 21361780     DOI: 10.1667/RR2419.1

Source DB:  PubMed          Journal:  Radiat Res        ISSN: 0033-7587            Impact factor:   2.841


  22 in total

1.  Laboratory intercomparison of gene expression assays.

Authors:  C Badie; S Kabacik; Y Balagurunathan; N Bernard; M Brengues; G Faggioni; R Greither; F Lista; A Peinnequin; T Poyot; F Herodin; A Missel; B Terbrueggen; F Zenhausern; K Rothkamm; V Meineke; H Braselmann; C Beinke; M Abend
Journal:  Radiat Res       Date:  2013-07-25       Impact factor: 2.841

2.  Impact of Neutron Exposure on Global Gene Expression in a Human Peripheral Blood Model.

Authors:  Constantinos G Broustas; Yanping Xu; Andrew D Harken; Mashkura Chowdhury; Guy Garty; Sally A Amundson
Journal:  Radiat Res       Date:  2017-01-31       Impact factor: 2.841

3.  Biodosimetric transcriptional and proteomic changes are conserved in irradiated human tissue.

Authors:  Simon P Keam; Twishi Gulati; Cristina Gamell; Franco Caramia; Gisela Mir Arnau; Cheng Huang; Ralf B Schittenhelm; Oded Kleifeld; Paul J Neeson; Scott G Williams; Ygal Haupt
Journal:  Radiat Environ Biophys       Date:  2018-05-30       Impact factor: 1.925

4.  Influence of Confounding Factors on Radiation Dose Estimation Using In Vivo Validated Transcriptional Biomarkers.

Authors:  Lourdes Cruz-Garcia; Grainne O'Brien; Ellen Donovan; Lone Gothard; Sue Boyle; Antoine Laval; Isabelle Testard; Lucyna Ponge; Grzegorz Woźniak; Leszek Miszczyk; Serge M Candéias; Elizabeth Ainsbury; Piotr Widlak; Navita Somaiah; Christophe Badie
Journal:  Health Phys       Date:  2018-07       Impact factor: 1.316

5.  Developing Human Radiation Biodosimetry Models: Testing Cross-Species Conversion Approaches Using an Ex Vivo Model System.

Authors:  Jin G Park; Sunirmal Paul; Natalia Briones; Jia Zeng; Kristin Gillis; Garrick Wallstrom; Joshua LaBaer; Sally A Amundson
Journal:  Radiat Res       Date:  2017-03-22       Impact factor: 2.841

6.  Global Gene Expression Response in Mouse Models of DNA Repair Deficiency after Gamma Irradiation.

Authors:  Nils Rudqvist; Evagelia C Laiakis; Shanaz A Ghandhi; Suresh Kumar; Jeffrey D Knotts; Mashkura Chowdhury; Albert J Fornace; Sally A Amundson
Journal:  Radiat Res       Date:  2018-01-19       Impact factor: 2.841

7.  Radiation Dose-Rate Effects on Gene Expression in a Mouse Biodosimetry Model.

Authors:  Sunirmal Paul; Lubomir B Smilenov; Carl D Elliston; Sally A Amundson
Journal:  Radiat Res       Date:  2015-06-26       Impact factor: 2.841

Review 8.  State-of-the-Art Advances in Radiation Biodosimetry for Mass Casualty Events Involving Radiation Exposure.

Authors:  Mary Sproull; Kevin Camphausen
Journal:  Radiat Res       Date:  2016-10-06       Impact factor: 2.841

9.  Gene expression as a biomarker for human radiation exposure.

Authors:  Romaica A Omaruddin; Thomas A Roland; H James Wallace; M Ahmad Chaudhry
Journal:  Hum Cell       Date:  2013-02-28       Impact factor: 4.174

10.  Gene expression response of mice after a single dose of 137CS as an internal emitter.

Authors:  Sunirmal Paul; Shanaz A Ghandhi; Waylon Weber; Melanie Doyle-Eisele; Dunstana Melo; Raymond Guilmette; Sally A Amundson
Journal:  Radiat Res       Date:  2014-08-27       Impact factor: 2.841

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