Literature DB >> 21346953

A Prospective Evaluation of an Automated Classification System to Support Evidence-based Medicine and Systematic Review.

Aaron M Cohen1, Kyle Ambert, Marian McDonagh.   

Abstract

Systematic reviews (SR) are an important and labor-intensive part of the Evidence-based Medicine process that could benefit from automated literature classification tools. We conducted a prospective study of a support vector machine-based classifier for supporting the SR literature triage process. Over 50,000 training data samples were collected for 18 topics prior to March 2008, and used to make predictions on 11,000 test data samples collected during the subsequent two years. Test performance (AUC) was comparable to that estimated by cross-validation on the training set, and ranging from 0.75 - 0.99. Mean AUC macro-averaged across all topics was 0.89, demonstrating that these methods can achieve accurate results in near-real world conditions and are promising tools for deployment to groups conducting SRs.

Mesh:

Year:  2010        PMID: 21346953      PMCID: PMC3041348     

Source DB:  PubMed          Journal:  AMIA Annu Symp Proc        ISSN: 1559-4076


  10 in total

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Authors:  Thomas A Lasko; Jui G Bhagwat; Kelly H Zou; Lucila Ohno-Machado
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Journal:  Evid Based Med       Date:  2006-12

4.  Adaptive classifiers, topic drifts and GO annotations.

Authors:  Padmini Srinivasan
Journal:  AMIA Annu Symp Proc       Date:  2007-10-11

5.  Towards automatic recognition of scientifically rigorous clinical research evidence.

Authors:  Halil Kilicoglu; Dina Demner-Fushman; Thomas C Rindflesch; Nancy L Wilczynski; R Brian Haynes
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6.  SYRIAC: The systematic review information automated collection system a data warehouse for facilitating automated biomedical text classification.

Authors:  Jianji J Yang; Aaron M Cohen; Aaron Cohen; Marian S McDonagh
Journal:  AMIA Annu Symp Proc       Date:  2008-11-06

7.  Optimizing feature representation for automated systematic review work prioritization.

Authors:  Aaron M Cohen
Journal:  AMIA Annu Symp Proc       Date:  2008-11-06

8.  Cross-topic learning for work prioritization in systematic review creation and update.

Authors:  Aaron M Cohen; Kyle Ambert; Marian McDonagh
Journal:  J Am Med Inform Assoc       Date:  2009-06-30       Impact factor: 4.497

9.  Risks and benefits of estrogen plus progestin in healthy postmenopausal women: principal results From the Women's Health Initiative randomized controlled trial.

Authors:  Jacques E Rossouw; Garnet L Anderson; Ross L Prentice; Andrea Z LaCroix; Charles Kooperberg; Marcia L Stefanick; Rebecca D Jackson; Shirley A A Beresford; Barbara V Howard; Karen C Johnson; Jane Morley Kotchen; Judith Ockene
Journal:  JAMA       Date:  2002-07-17       Impact factor: 56.272

Review 10.  When and how to update systematic reviews.

Authors:  D Moher; A Tsertsvadze; A C Tricco; M Eccles; J Grimshaw; M Sampson; N Barrowman
Journal:  Cochrane Database Syst Rev       Date:  2008-01-23
  10 in total
  10 in total

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Authors:  Amal Alharbi; Mark Stevenson
Journal:  J Am Med Inform Assoc       Date:  2020-11-01       Impact factor: 4.497

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Authors:  Duy Duc An Bui; Siddhartha Jonnalagadda; Guilherme Del Fiol
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3.  Studying the potential impact of automated document classification on scheduling a systematic review update.

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Review 4.  Using text mining for study identification in systematic reviews: a systematic review of current approaches.

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5.  Automated confidence ranked classification of randomized controlled trial articles: an aid to evidence-based medicine.

Authors:  Aaron M Cohen; Neil R Smalheiser; Marian S McDonagh; Clement Yu; Clive E Adams; John M Davis; Philip S Yu
Journal:  J Am Med Inform Assoc       Date:  2015-02-05       Impact factor: 4.497

6.  Virk: an active learning-based system for bootstrapping knowledge base development in the neurosciences.

Authors:  Kyle H Ambert; Aaron M Cohen; Gully A P C Burns; Eilis Boudreau; Kemal Sonmez
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7.  Derivation and validation of different machine-learning models in mortality prediction of trauma in motorcycle riders: a cross-sectional retrospective study in southern Taiwan.

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Journal:  BMJ Open       Date:  2018-01-05       Impact factor: 2.692

8.  Improving reference prioritisation with PICO recognition.

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9.  Prioritising references for systematic reviews with RobotAnalyst: A user study.

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10.  SWIFT-Active Screener: Accelerated document screening through active learning and integrated recall estimation.

Authors:  Brian E Howard; Jason Phillips; Arpit Tandon; Adyasha Maharana; Rebecca Elmore; Deepak Mav; Alex Sedykh; Kristina Thayer; B Alex Merrick; Vickie Walker; Andrew Rooney; Ruchir R Shah
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  10 in total

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