Literature DB >> 21337020

Importance of data management in a long-term biological monitoring program.

Sigurd W Christensen1, Craig C Brandt, Mary K McCracken.   

Abstract

The long-term Biological Monitoring and Abatement Program (BMAP) has always needed to collect and retain high-quality data on which to base its assessments of ecological status of streams and their recovery after remediation. Its formal quality assurance, data processing, and data management components all contribute to meeting this need. The Quality Assurance Program comprehensively addresses requirements from various institutions, funders, and regulators, and includes a data management component. Centralized data management began a few years into the program when an existing relational database was adapted and extended to handle biological data. The database's main data tables and several key reference tables are described. One of the most important related activities supporting long-term analyses was the establishing of standards for sampling site names, taxonomic identification, flagging, and other components. The implemented relational database supports the transmittal of data to the Oak Ridge Environmental Information System (OREIS) as the permanent repository. We also discuss some limitations to our implementation. Some types of program data were not easily accommodated in the central systems, and many possible data-sharing and integration options are not easily accessible to investigators. From our experience we offer data management advice to other biologically oriented long-term environmental sampling and analysis programs.

Mesh:

Year:  2011        PMID: 21337020     DOI: 10.1007/s00267-010-9576-1

Source DB:  PubMed          Journal:  Environ Manage        ISSN: 0364-152X            Impact factor:   3.266


  11 in total

1.  Data and metadata reporting standards for the U.S. Environmental Protection Agency's PM Supersites Research Program.

Authors:  L A Hook; S W Christensen; W B Sukloff
Journal:  Qual Assur       Date:  2001 Jul-Dec

2.  Funding high-throughput data sharing.

Authors:  Catherine A Ball; Gavin Sherlock; Alvis Brazma
Journal:  Nat Biotechnol       Date:  2004-09       Impact factor: 54.908

3.  Taxonomic inflation: its influence on macroecology and conservation.

Authors:  Nick J B Isaac; James Mallet; Georgina M Mace
Journal:  Trends Ecol Evol       Date:  2004-09       Impact factor: 17.712

Review 4.  Beyond data management: how ecoinformatics can benefit environmental monitoring programs.

Authors:  Stephen S Hale; Jeffrey W Hollister
Journal:  Environ Monit Assess       Date:  2008-12-03       Impact factor: 2.513

5.  Long-term benthic macroinvertebrate community monitoring to assess pollution abatement effectiveness.

Authors:  John G Smith; Craig C Brandt; Sigurd W Christensen
Journal:  Environ Manage       Date:  2011-01-28       Impact factor: 3.266

6.  Long-term water-quality changes in East Fork Poplar Creek, Tennessee: background, trends, and potential biological consequences.

Authors:  Arthur J Stewart; John G Smith; James M Loar
Journal:  Environ Manage       Date:  2011-03-06       Impact factor: 3.266

Review 7.  Twenty-five years of ecological recovery of East Fork Poplar Creek: review of environmental problems and remedial actions.

Authors:  James M Loar; Arthur J Stewart; John G Smith
Journal:  Environ Manage       Date:  2011-03-08       Impact factor: 3.266

8.  Introduction to the biological monitoring and abatement program.

Authors:  Mark J Peterson
Journal:  Environ Manage       Date:  2011-03-05       Impact factor: 3.266

9.  Role of a comprehensive toxicity assessment and monitoring program in the management and ecological recovery of a wastewater receiving stream.

Authors:  Mark S Greeley; Lynn A Kszos; Gail W Morris; John G Smith; Arthur J Stewart
Journal:  Environ Manage       Date:  2011-05-15       Impact factor: 3.266

10.  Monitoring fish contaminant responses to abatement actions: factors that affect recovery.

Authors:  George R Southworth; Mark J Peterson; W Kelly Roy; Teresa J Mathews
Journal:  Environ Manage       Date:  2011-03-06       Impact factor: 3.266

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  3 in total

1.  Long-term biological monitoring of an impaired stream: synthesis and environmental management implications.

Authors:  Mark J Peterson; Rebecca A Efroymson; S Marshall Adams
Journal:  Environ Manage       Date:  2011-04-08       Impact factor: 3.266

2.  Introduction to the biological monitoring and abatement program.

Authors:  Mark J Peterson
Journal:  Environ Manage       Date:  2011-03-05       Impact factor: 3.266

3.  Workshop report: Identifying opportunities for global integration of toxicogenomics databases, 26-27 June 2013, Research Triangle Park, NC, USA.

Authors:  Diana M Hendrickx; Rebecca R Boyles; Jos C S Kleinjans; Allen Dearry
Journal:  Arch Toxicol       Date:  2014-10-19       Impact factor: 5.153

  3 in total

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