Literature DB >> 21324774

ODVBA: optimally-discriminative voxel-based analysis.

Tianhao Zhang1, Christos Davatzikos.   

Abstract

Gaussian smoothing of images prior to applying voxel-based statistics is an important step in voxel-based analysis and statistical parametric mapping (VBA-SPM) and is used to account for registration errors, to Gaussianize the data and to integrate imaging signals from a region around each voxel. However, it has also become a limitation of VBA-SPM based methods, since it is often chosen empirically and lacks spatial adaptivity to the shape and spatial extent of the region of interest, such as a region of atrophy or functional activity. In this paper, we propose a new framework, named optimally-discriminative voxel-based analysis (ODVBA), for determining the optimal spatially adaptive smoothing of images, followed by applying voxel-based group analysis. In ODVBA, nonnegative discriminative projection is applied regionally to get the direction that best discriminates between two groups, e.g., patients and controls; this direction is equivalent to local filtering by an optimal kernel whose coefficients define the optimally discriminative direction. By considering all the neighborhoods that contain a given voxel, we then compose this information to produce the statistic for each voxel. Finally, permutation tests are used to obtain a statistical parametric map of group differences. ODVBA has been evaluated using simulated data in which the ground truth is known and with data from an Alzheimer's disease (AD) study. The experimental results have shown that the proposed ODVBA can precisely describe the shape and location of structural abnormality.

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Year:  2011        PMID: 21324774      PMCID: PMC3402713          DOI: 10.1109/TMI.2011.2114362

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   10.048


  41 in total

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Journal:  Neuroimage       Date:  2000-06       Impact factor: 6.556

4.  Nonparametric permutation tests for functional neuroimaging: a primer with examples.

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Journal:  Hum Brain Mapp       Date:  2002-01       Impact factor: 5.038

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Journal:  IEEE Trans Med Imaging       Date:  2001-05       Impact factor: 10.048

6.  In vivo mapping of gray matter loss with voxel-based morphometry in mild Alzheimer's disease.

Authors:  J C Baron; G Chételat; B Desgranges; G Perchey; B Landeau; V de la Sayette; F Eustache
Journal:  Neuroimage       Date:  2001-08       Impact factor: 6.556

7.  Distributed and overlapping representations of faces and objects in ventral temporal cortex.

Authors:  J V Haxby; M I Gobbini; M L Furey; A Ishai; J L Schouten; P Pietrini
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8.  Voxel-based morphometry using the RAVENS maps: methods and validation using simulated longitudinal atrophy.

Authors:  C Davatzikos; A Genc; D Xu; S M Resnick
Journal:  Neuroimage       Date:  2001-12       Impact factor: 6.556

9.  Comparison of AdaBoost and support vector machines for detecting Alzheimer's disease through automated hippocampal segmentation.

Authors:  Jonathan H Morra; Zhuowen Tu; Liana G Apostolova; Amity E Green; Arthur W Toga; Paul M Thompson
Journal:  IEEE Trans Med Imaging       Date:  2009-05-19       Impact factor: 10.048

10.  Feature-based morphometry: discovering group-related anatomical patterns.

Authors:  Matthew Toews; William Wells; D Louis Collins; Tal Arbel
Journal:  Neuroimage       Date:  2009-10-21       Impact factor: 6.556

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  22 in total

Review 1.  The Alzheimer's Disease Neuroimaging Initiative: a review of papers published since its inception.

Authors:  Michael W Weiner; Dallas P Veitch; Paul S Aisen; Laurel A Beckett; Nigel J Cairns; Robert C Green; Danielle Harvey; Clifford R Jack; William Jagust; Enchi Liu; John C Morris; Ronald C Petersen; Andrew J Saykin; Mark E Schmidt; Leslie Shaw; Judith A Siuciak; Holly Soares; Arthur W Toga; John Q Trojanowski
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2.  Relevant feature set estimation with a knock-out strategy and random forests.

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3.  White matter hyperintensities and imaging patterns of brain ageing in the general population.

Authors:  Mohamad Habes; Guray Erus; Jon B Toledo; Tianhao Zhang; Nick Bryan; Lenore J Launer; Yves Rosseel; Deborah Janowitz; Jimit Doshi; Sandra Van der Auwera; Bettina von Sarnowski; Katrin Hegenscheid; Norbert Hosten; Georg Homuth; Henry Völzke; Ulf Schminke; Wolfgang Hoffmann; Hans J Grabe; Christos Davatzikos
Journal:  Brain       Date:  2016-02-24       Impact factor: 13.501

4.  Multisite Machine Learning Analysis Provides a Robust Structural Imaging Signature of Schizophrenia Detectable Across Diverse Patient Populations and Within Individuals.

Authors:  Martin Rozycki; Theodore D Satterthwaite; Nikolaos Koutsouleris; Guray Erus; Jimit Doshi; Daniel H Wolf; Yong Fan; Raquel E Gur; Ruben C Gur; Eva M Meisenzahl; Chuanjun Zhuo; Hong Yin; Hao Yan; Weihua Yue; Dai Zhang; Christos Davatzikos
Journal:  Schizophr Bull       Date:  2018-08-20       Impact factor: 9.306

5.  Heterogeneity of structural brain changes in subtypes of schizophrenia revealed using magnetic resonance imaging pattern analysis.

Authors:  Tianhao Zhang; Nikolaos Koutsouleris; Eva Meisenzahl; Christos Davatzikos
Journal:  Schizophr Bull       Date:  2014-09-26       Impact factor: 9.306

6.  Multimodal magnetic resonance imaging study of treatment-naïve adults with attention-deficit/hyperactivity disorder.

Authors:  Tiffany M Chaim; Tianhao Zhang; Marcus V Zanetti; Maria Aparecida da Silva; Mário R Louzã; Jimit Doshi; Mauricio H Serpa; Fabio L S Duran; Sheila C Caetano; Christos Davatzikos; Geraldo F Busatto
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7.  MIDAS: Regionally linear multivariate discriminative statistical mapping.

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Review 8.  2014 Update of the Alzheimer's Disease Neuroimaging Initiative: A review of papers published since its inception.

Authors:  Michael W Weiner; Dallas P Veitch; Paul S Aisen; Laurel A Beckett; Nigel J Cairns; Jesse Cedarbaum; Robert C Green; Danielle Harvey; Clifford R Jack; William Jagust; Johan Luthman; John C Morris; Ronald C Petersen; Andrew J Saykin; Leslie Shaw; Li Shen; Adam Schwarz; Arthur W Toga; John Q Trojanowski
Journal:  Alzheimers Dement       Date:  2015-06       Impact factor: 21.566

9.  SCoRS--A Method Based on Stability for Feature Selection and Mapping inNeuroimaging [corrected].

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Journal:  IEEE Trans Med Imaging       Date:  2013-09-11       Impact factor: 10.048

10.  Multiscale adaptive generalized estimating equations for longitudinal neuroimaging data.

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