Literature DB >> 21243438

A plant cocktail amenable for PCR-based genetic analysis in Arabidopsis thaliana.

Simeon O Kotchoni1, Emma W Gachomo, Jose C Jimenez-Lopez.   

Abstract

Extraction of plant genomic DNA for subsequent genetic studies is often lengthy and difficult. In addition, it requires the use of toxic reagents that remove secondary plant products, which otherwise interfere with the polymerase chain reaction steps. Here we describe a simple cost-efficient one-step protocol for PCR-based analysis in Arabidopsis thaliana. This protocol is quick, performed at room temperature without the need for DNA extraction. Potential applications in higher plants are here discussed.

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Year:  2011        PMID: 21243438     DOI: 10.1007/s11033-011-0677-6

Source DB:  PubMed          Journal:  Mol Biol Rep        ISSN: 0301-4851            Impact factor:   2.316


  8 in total

1.  An efficient method for isolation of RNA and DNA from plants containing polyphenolics.

Authors:  M E John
Journal:  Nucleic Acids Res       Date:  1992-05-11       Impact factor: 16.971

2.  A rapid and hazardous reagent free protocol for genomic DNA extraction suitable for genetic studies in plants.

Authors:  Simeon O Kotchoni; Emma W Gachomo
Journal:  Mol Biol Rep       Date:  2008-09-11       Impact factor: 2.316

3.  A simplified arthropod genomic-DNA extraction protocol for polymerase chain reaction (PCR)-based specimen identification through barcoding.

Authors:  Venu M Margam; Emma W Gachomo; John H Shukle; Oluwole O Ariyo; Manfredo J Seufferheld; Simeon O Kotchoni
Journal:  Mol Biol Rep       Date:  2010-03-04       Impact factor: 2.316

4.  Universal and rapid salt-extraction of high quality genomic DNA for PCR-based techniques.

Authors:  S M Aljanabi; I Martinez
Journal:  Nucleic Acids Res       Date:  1997-11-15       Impact factor: 16.971

5.  A simple salting out procedure for extracting DNA from human nucleated cells.

Authors:  S A Miller; D D Dykes; H F Polesky
Journal:  Nucleic Acids Res       Date:  1988-02-11       Impact factor: 16.971

6.  Rapid isolation of high molecular weight plant DNA.

Authors:  M G Murray; W F Thompson
Journal:  Nucleic Acids Res       Date:  1980-10-10       Impact factor: 16.971

7.  Rapid and simple methodology for isolation of high quality genomic DNA from coniferous tissues (Taxus baccata).

Authors:  Abolfazl Barzegari; Sepideh Zununi Vahed; Sina Atashpaz; Sajjad Khani; Yadollah Omidi
Journal:  Mol Biol Rep       Date:  2009-08-02       Impact factor: 2.316

8.  The association of the Arabidopsis actin-related protein2/3 complex with cell membranes is linked to its assembly status but not its activation.

Authors:  Simeon O Kotchoni; Taya Zakharova; Eileen L Mallery; Jie Le; Salah El-Din El-Assal; Daniel B Szymanski
Journal:  Plant Physiol       Date:  2009-10-02       Impact factor: 8.340

  8 in total
  1 in total

1.  Looking for Hidden Enemies of Metabarcoding: Species Composition, Habitat and Management Can Strongly Influence DNA Extraction while Examining Grassland Communities.

Authors:  Anna Rucińska; Marcin Olszak; Sebastian Świerszcz; Marcin Nobis; Szymon Zubek; Grzegorz Kusza; Maja Boczkowska; Arkadiusz Nowak
Journal:  Biomolecules       Date:  2021-02-19
  1 in total

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