Literature DB >> 21234568

A theoretical analysis of filament length fluctuations in actin and other polymers.

Jifeng Hu1, Hans G Othmer.   

Abstract

Control of the structure and dynamics of the actin cytoskeleton is essential for cell motility and for maintaining the structural integrity of cells. Central to understanding the control of these features is an understanding of the dynamics of actin filaments, first as isolated filaments, then as integrated networks, and finally as networks containing higher-order structures such as bundles, stress fibers and acto-myosin complexes. It is known experimentally that single filaments can exhibit large fluctuations, but a detailed understanding of the transient dynamics involved is still lacking. Here we first study stochastic models of a general system involving two-monomer types that can be analyzed completely, and then we report stochastic simulations on the complete actin model with three monomer types. We systematically examine the transient behavior of filament length dynamics so as to gain a better understanding of the time scales involved in reaching a steady state. We predict the lifetime of a cap of one monomer type and obtain the mean and variance of the survival time of a cap at the filament end, which together determine the filament length fluctuations. © Springer-Verlag 2011

Entities:  

Mesh:

Substances:

Year:  2011        PMID: 21234568      PMCID: PMC3099255          DOI: 10.1007/s00285-010-0400-6

Source DB:  PubMed          Journal:  J Math Biol        ISSN: 0303-6812            Impact factor:   2.259


  31 in total

Review 1.  Cellular motility driven by assembly and disassembly of actin filaments.

Authors:  Thomas D Pollard; Gary G Borisy
Journal:  Cell       Date:  2003-02-21       Impact factor: 41.582

2.  Microscopic analysis of polymerization dynamics with individual actin filaments.

Authors:  Ikuko Fujiwara; Shin Takahashi; Hisashi Tadakuma; Takashi Funatsu; Shin'ichi Ishiwata
Journal:  Nat Cell Biol       Date:  2002-09       Impact factor: 28.824

3.  Forces generated during actin-based propulsion: a direct measurement by micromanipulation.

Authors:  Yann Marcy; Jacques Prost; Marie-France Carlier; Cécile Sykes
Journal:  Proc Natl Acad Sci U S A       Date:  2004-04-12       Impact factor: 11.205

Review 4.  Regulation of actin filament assembly by Arp2/3 complex and formins.

Authors:  Thomas D Pollard
Journal:  Annu Rev Biophys Biomol Struct       Date:  2007

5.  Stochastic simulation of actin dynamics reveals the role of annealing and fragmentation.

Authors:  Joseph Fass; Chi Pak; James Bamburg; Alex Mogilner
Journal:  J Theor Biol       Date:  2008-01-11       Impact factor: 2.691

6.  Model of reduction of actin polymerization forces by ATP hydrolysis.

Authors:  A E Carlsson
Journal:  Phys Biol       Date:  2008-07-14       Impact factor: 2.583

7.  Nonequilibrium self-assembly of a filament coupled to ATP/GTP hydrolysis.

Authors:  Padinhateeri Ranjith; David Lacoste; Kirone Mallick; Jean-François Joanny
Journal:  Biophys J       Date:  2009-03-18       Impact factor: 4.033

8.  Force and length regulation in the microtubule cytoskeleton: lessons from fission yeast.

Authors:  Iva M Tolić-Nørrelykke
Journal:  Curr Opin Cell Biol       Date:  2010-01-08       Impact factor: 8.382

9.  Theoretical study of a model for the ATP cap at the end of an actin filament.

Authors:  T L Hill
Journal:  Biophys J       Date:  1986-05       Impact factor: 4.033

10.  Dynamic instability of microtubule growth.

Authors:  T Mitchison; M Kirschner
Journal:  Nature       Date:  1984 Nov 15-21       Impact factor: 49.962

View more
  2 in total

1.  The Limiting-Pool Mechanism Fails to Control the Size of Multiple Organelles.

Authors:  Lishibanya Mohapatra; Thibaut J Lagny; David Harbage; Predrag R Jelenkovic; Jane Kondev
Journal:  Cell Syst       Date:  2017-05-24       Impact factor: 10.304

2.  Quantitative analysis of approaches to measure cooperative phosphate release in polymerized actin.

Authors:  Mark M Burnett; Anders E Carlsson
Journal:  Biophys J       Date:  2012-12-05       Impact factor: 4.033

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.