Literature DB >> 23283236

Quantitative analysis of approaches to measure cooperative phosphate release in polymerized actin.

Mark M Burnett1, Anders E Carlsson.   

Abstract

We use stochastic simulations that treat several experimental probes of actin dynamics to explore the extent to which phosphate dissociation in filamentous actin may be cooperative. Phosphate time-courses from polymerization and copolymerization experiments of ATP- and ADP-actin are studied, including the effects of variations in filament-number concentration as well as single-filament depolymerization time-courses. We find that highly cooperative models are consistent with the treated experimental data. We also find that some types of experiments that are believed to provide strong constraints on the cooperativity of actin hydrolysis models do not provide such constraints.
Copyright © 2012 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2012        PMID: 23283236      PMCID: PMC3514521          DOI: 10.1016/j.bpj.2012.10.032

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  30 in total

1.  Annealing accounts for the length of actin filaments formed by spontaneous polymerization.

Authors:  D Sept; J Xu; T D Pollard; J A McCammon
Journal:  Biophys J       Date:  1999-12       Impact factor: 4.033

2.  Hydrolysis of ATP by polymerized actin depends on the bound divalent cation but not profilin.

Authors:  Laurent Blanchoin; Thomas D Pollard
Journal:  Biochemistry       Date:  2002-01-15       Impact factor: 3.162

3.  Microscopic analysis of polymerization dynamics with individual actin filaments.

Authors:  Ikuko Fujiwara; Shin Takahashi; Hisashi Tadakuma; Takashi Funatsu; Shin'ichi Ishiwata
Journal:  Nat Cell Biol       Date:  2002-09       Impact factor: 28.824

4.  Intermittent depolymerization of actin filaments is caused by photo-induced dimerization of actin protomers.

Authors:  Thomas Niedermayer; Antoine Jégou; Lionel Chièze; Bérengère Guichard; Emmanuèle Helfer; Guillaume Romet-Lemonne; Marie-France Carlier; Reinhard Lipowsky
Journal:  Proc Natl Acad Sci U S A       Date:  2012-06-13       Impact factor: 11.205

5.  The mechanisms of ATP hydrolysis accompanying the polymerization of Mg-actin and Ca-actin.

Authors:  M F Carlier; D Pantaloni; E D Korn
Journal:  J Biol Chem       Date:  1987-03-05       Impact factor: 5.157

6.  Direct evidence for ADP-Pi-F-actin as the major intermediate in ATP-actin polymerization. Rate of dissociation of Pi from actin filaments.

Authors:  M F Carlier; D Pantaloni
Journal:  Biochemistry       Date:  1986-12-02       Impact factor: 3.162

7.  Mechanism of ATP hydrolysis by polymeric actin.

Authors:  T Ohm; A Wegner
Journal:  Biochim Biophys Acta       Date:  1994-09-21

8.  A model for actin polymerization and the kinetic effects of ATP hydrolysis.

Authors:  D Pantaloni; T L Hill; M F Carlier; E D Korn
Journal:  Proc Natl Acad Sci U S A       Date:  1985-11       Impact factor: 11.205

9.  The effects of Mg2+ at the high-affinity and low-affinity sites on the polymerization of actin and associated ATP hydrolysis.

Authors:  M F Carlier; D Pantaloni; E D Korn
Journal:  J Biol Chem       Date:  1986-08-15       Impact factor: 5.157

10.  Rate constants for the reactions of ATP- and ADP-actin with the ends of actin filaments.

Authors:  T D Pollard
Journal:  J Cell Biol       Date:  1986-12       Impact factor: 10.539

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  3 in total

1.  On phosphate release in actin filaments.

Authors:  Antoine Jégou; Thomas Niedermayer; Reinhard Lipowsky; Marie-France Carlier; Guillaume Romet-Lemonne
Journal:  Biophys J       Date:  2013-06-18       Impact factor: 4.033

2.  Response to "on phosphate release in actin filaments".

Authors:  M M Burnett; A E Carlsson
Journal:  Biophys J       Date:  2013-06-18       Impact factor: 4.033

3.  Insights into the Cooperative Nature of ATP Hydrolysis in Actin Filaments.

Authors:  Harshwardhan H Katkar; Aram Davtyan; Aleksander E P Durumeric; Glen M Hocky; Anthony C Schramm; Enrique M De La Cruz; Gregory A Voth
Journal:  Biophys J       Date:  2018-09-01       Impact factor: 4.033

  3 in total

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