Literature DB >> 21231560

Sources and sinks: a stochastic model of evolution in heterogeneous environments.

Rutger Hermsen1, Terence Hwa.   

Abstract

We study evolution driven by spatial heterogeneity in a stochastic model of source-sink ecologies. A sink is a habitat where mortality exceeds reproduction so that a local population persists only due to immigration from a source. Immigrants can, however, adapt to conditions in the sink by mutation. To characterize the adaptation rate, we derive expressions for the first arrival time of adapted mutants. The joint effects of migration, mutation, birth, and death result in two distinct parameter regimes. These results may pertain to the rapid evolution of drug-resistant pathogens and insects.

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Year:  2010        PMID: 21231560      PMCID: PMC4038430          DOI: 10.1103/PhysRevLett.105.248104

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  13 in total

1.  The effects of density dependence and immigration on local adaptation and niche evolution in a black-hole sink environment.

Authors:  R Gomulkiewicz; R D Holt; M Barfield
Journal:  Theor Popul Biol       Date:  1999-06       Impact factor: 1.570

2.  Adaptation to marginal habitats: contrasting influence of the dispersal rate on the fate of alleles with small and large effects.

Authors:  T J Kawecki
Journal:  Proc Biol Sci       Date:  2000-07-07       Impact factor: 5.349

3.  The phenomenology of niche evolution via quantitative traits in a 'black-hole' sink.

Authors:  R D Holt; R Gomulkiewicz; M Barfield
Journal:  Proc Biol Sci       Date:  2003-01-22       Impact factor: 5.349

Review 4.  Source-sink dynamics of virulence evolution.

Authors:  Evgeni V Sokurenko; Richard Gomulkiewicz; Daniel E Dykhuizen
Journal:  Nat Rev Microbiol       Date:  2006-07       Impact factor: 60.633

5.  Empirical fitness landscapes reveal accessible evolutionary paths.

Authors:  Frank J Poelwijk; Daniel J Kiviet; Daniel M Weinreich; Sander J Tans
Journal:  Nature       Date:  2007-01-25       Impact factor: 49.962

6.  Source-sink dynamics shape the evolution of antibiotic resistance and its pleiotropic fitness cost.

Authors:  Gabriel G Perron; Andrew Gonzalez; Angus Buckling
Journal:  Proc Biol Sci       Date:  2007-09-22       Impact factor: 5.349

7.  Haplotype diversity in "source-sink" dynamics of Escherichia coli urovirulence.

Authors:  Sujay Chattopadhyay; Michael Feldgarden; Scott J Weissman; Daniel E Dykhuizen; Gerald van Belle; Evgeni V Sokurenko
Journal:  J Mol Evol       Date:  2006-12-19       Impact factor: 2.395

8.  Development of Neutral and Nearly Neutral Theories

Authors: 
Journal:  Theor Popul Biol       Date:  1996-04       Impact factor: 1.570

9.  Evidence that adaptation in Drosophila is not limited by mutation at single sites.

Authors:  Talia Karasov; Philipp W Messer; Dmitri A Petrov
Journal:  PLoS Genet       Date:  2010-06-17       Impact factor: 5.917

10.  Selective neutrality of 6PGD allozymes in E. coli and the effects of genetic background.

Authors:  D Dykhuizen; D L Hartl
Journal:  Genetics       Date:  1980-12       Impact factor: 4.562

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  22 in total

1.  Following evolution of bacterial antibiotic resistance in real time.

Authors:  Adam Z Rosenthal; Michael B Elowitz
Journal:  Nat Genet       Date:  2011-12-27       Impact factor: 38.330

2.  On the rapidity of antibiotic resistance evolution facilitated by a concentration gradient.

Authors:  Rutger Hermsen; J Barrett Deris; Terence Hwa
Journal:  Proc Natl Acad Sci U S A       Date:  2012-06-18       Impact factor: 11.205

3.  Ancient hot and cold genes and chemotherapy resistance emergence.

Authors:  Amy Wu; Qiucen Zhang; Guillaume Lambert; Zayar Khin; Robert A Gatenby; Hyunsung John Kim; Nader Pourmand; Kimberly Bussey; Paul C W Davies; James C Sturm; Robert H Austin
Journal:  Proc Natl Acad Sci U S A       Date:  2015-08-03       Impact factor: 11.205

4.  Modular knowledge systems accelerate human migration in asymmetric random environments.

Authors:  Dong Wang; Michael W Deem
Journal:  J R Soc Interface       Date:  2016-12       Impact factor: 4.118

5.  Microbiology. Antibiotic resistance, not shaken or stirred.

Authors:  Ryan L Frisch; Susan M Rosenberg
Journal:  Science       Date:  2011-09-23       Impact factor: 47.728

6.  Fixation times in differentiation and evolution in the presence of bottlenecks, deserts, and oases.

Authors:  Tom Chou; Yu Wang
Journal:  J Theor Biol       Date:  2015-03-03       Impact factor: 2.691

7.  The Goldilocks principle and antibiotic resistance in bacteria.

Authors:  Qiucen Zhang; Kristelle Robin; David Liao; Guillaume Lambert; Robert H Austin
Journal:  Mol Pharm       Date:  2011-11-15       Impact factor: 4.939

Review 8.  An analogy between the evolution of drug resistance in bacterial communities and malignant tissues.

Authors:  Guillaume Lambert; Luis Estévez-Salmeron; Steve Oh; David Liao; Beverly M Emerson; Thea D Tlsty; Robert H Austin
Journal:  Nat Rev Cancer       Date:  2011-05       Impact factor: 60.716

9.  The innate growth bistability and fitness landscapes of antibiotic-resistant bacteria.

Authors:  J Barrett Deris; Minsu Kim; Zhongge Zhang; Hiroyuki Okano; Rutger Hermsen; Alexander Groisman; Terence Hwa
Journal:  Science       Date:  2013-11-29       Impact factor: 47.728

10.  Emergence of antibiotic resistance from multinucleated bacterial filaments.

Authors:  Julia Bos; Qiucen Zhang; Saurabh Vyawahare; Elizabeth Rogers; Susan M Rosenberg; Robert H Austin
Journal:  Proc Natl Acad Sci U S A       Date:  2014-12-09       Impact factor: 11.205

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