Literature DB >> 17251971

Empirical fitness landscapes reveal accessible evolutionary paths.

Frank J Poelwijk1, Daniel J Kiviet, Daniel M Weinreich, Sander J Tans.   

Abstract

When attempting to understand evolution, we traditionally rely on analysing evolutionary outcomes, despite the fact that unseen intermediates determine its course. A handful of recent studies has begun to explore these intermediate evolutionary forms, which can be reconstructed in the laboratory. With this first view on empirical evolutionary landscapes, we can now finally start asking why particular evolutionary paths are taken.

Mesh:

Year:  2007        PMID: 17251971     DOI: 10.1038/nature05451

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  197 in total

1.  Combinatorial reshaping of the Candida antarctica lipase A substrate pocket for enantioselectivity using an extremely condensed library.

Authors:  Anders G Sandström; Ylva Wikmark; Karin Engström; Jonas Nyhlén; Jan-E Bäckvall
Journal:  Proc Natl Acad Sci U S A       Date:  2011-12-16       Impact factor: 11.205

2.  Epistasis can lead to fragmented neutral spaces and contingency in evolution.

Authors:  Steffen Schaper; Iain G Johnston; Ard A Louis
Journal:  Proc Biol Sci       Date:  2011-12-07       Impact factor: 5.349

3.  Magnitude and sign epistasis among deleterious mutations in a positive-sense plant RNA virus.

Authors:  J Lalić; S F Elena
Journal:  Heredity (Edinb)       Date:  2012-04-11       Impact factor: 3.821

4.  Real time forecasting of near-future evolution.

Authors:  Philip J Gerrish; Paul D Sniegowski
Journal:  J R Soc Interface       Date:  2012-04-18       Impact factor: 4.118

5.  Fitness conferred by replaced amino acids declines with time.

Authors:  Sergey A Naumenko; Alexey S Kondrashov; Georgii A Bazykin
Journal:  Biol Lett       Date:  2012-05-23       Impact factor: 3.703

6.  Environmental change exposes beneficial epistatic interactions in a catalytic RNA.

Authors:  Eric J Hayden; Andreas Wagner
Journal:  Proc Biol Sci       Date:  2012-06-20       Impact factor: 5.349

Review 7.  Mutational effects and the evolution of new protein functions.

Authors:  Misha Soskine; Dan S Tawfik
Journal:  Nat Rev Genet       Date:  2010-08       Impact factor: 53.242

8.  Sequence space and the ongoing expansion of the protein universe.

Authors:  Inna S Povolotskaya; Fyodor A Kondrashov
Journal:  Nature       Date:  2010-05-19       Impact factor: 49.962

9.  The peaks and geometry of fitness landscapes.

Authors:  Kristina Crona; Devin Greene; Miriam Barlow
Journal:  J Theor Biol       Date:  2012-10-02       Impact factor: 2.691

10.  Global view of bionetwork dynamics: adaptive landscape.

Authors:  Ping Ao
Journal:  J Genet Genomics       Date:  2009-02       Impact factor: 4.275

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