Literature DB >> 22711808

On the rapidity of antibiotic resistance evolution facilitated by a concentration gradient.

Rutger Hermsen1, J Barrett Deris, Terence Hwa.   

Abstract

The rapid emergence of bacterial strains resistant to multiple antibiotics is posing a growing public health risk. The mechanisms underlying the rapid evolution of drug resistance are, however, poorly understood. The heterogeneity of the environments in which bacteria encounter antibiotic drugs could play an important role. E.g., in the highly compartmentalized human body, drug levels can vary substantially between different organs and tissues. It has been proposed that this could facilitate the selection of resistant mutants, and recent experiments support this. To study the role of spatial heterogeneity in the evolution of drug resistance, we present a quantitative model describing an environment subdivided into relatively isolated compartments with various antibiotic concentrations, in which bacteria evolve under the stochastic processes of proliferation, migration, mutation and death. Analytical and numerical results demonstrate that concentration gradients can foster a mode of adaptation that is impossible in uniform environments. It allows resistant mutants to evade competition and circumvent the slow process of fixation by invading compartments with higher drug concentrations, where less resistant strains cannot subsist. The speed of this process increases sharply with the sensitivity of the growth rate to the antibiotic concentration, which we argue to be generic. Comparable adaptation rates in uniform environments would require a high selection coefficient (s > 0.1) for each forward mutation. Similar processes can occur if the heterogeneity is more complex than just a linear gradient. The model may also be applicable to other adaptive processes involving environmental heterogeneity and range expansion.

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Year:  2012        PMID: 22711808      PMCID: PMC3390829          DOI: 10.1073/pnas.1117716109

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  31 in total

Review 1.  The rise and fall of antimicrobial resistance.

Authors:  M Lipsitch
Journal:  Trends Microbiol       Date:  2001-09       Impact factor: 17.079

2.  When sources become sinks: migrational meltdown in heterogeneous habitats.

Authors:  O Ronce; M Kirkpatrick
Journal:  Evolution       Date:  2001-08       Impact factor: 3.694

3.  The phenomenology of niche evolution via quantitative traits in a 'black-hole' sink.

Authors:  R D Holt; R Gomulkiewicz; M Barfield
Journal:  Proc Biol Sci       Date:  2003-01-22       Impact factor: 5.349

4.  Persistent colonization and the spread of antibiotic resistance in nosocomial pathogens: resistance is a regional problem.

Authors:  David L Smith; Jonathan Dushoff; Eli N Perencevich; Anthony D Harris; Simon A Levin
Journal:  Proc Natl Acad Sci U S A       Date:  2004-02-25       Impact factor: 11.205

5.  Acceleration of emergence of bacterial antibiotic resistance in connected microenvironments.

Authors:  Qiucen Zhang; Guillaume Lambert; David Liao; Hyunsung Kim; Kristelle Robin; Chih-kuan Tung; Nader Pourmand; Robert H Austin
Journal:  Science       Date:  2011-09-23       Impact factor: 47.728

6.  Sources and sinks: a stochastic model of evolution in heterogeneous environments.

Authors:  Rutger Hermsen; Terence Hwa
Journal:  Phys Rev Lett       Date:  2010-12-08       Impact factor: 9.161

Review 7.  Selective compartments for resistant microorganisms in antibiotic gradients.

Authors:  F Baquero; M C Negri
Journal:  Bioessays       Date:  1997-08       Impact factor: 4.345

8.  High mutation frequencies among Escherichia coli and Salmonella pathogens.

Authors:  J E LeClerc; B Li; W L Payne; T A Cebula
Journal:  Science       Date:  1996-11-15       Impact factor: 47.728

9.  Failure of drug penetration and acquisition of drug resistance in chronic tuberculous empyema.

Authors:  A M Elliott; S E Berning; M D Iseman; C A Peloquin
Journal:  Tuber Lung Dis       Date:  1995-10

10.  Selective neutrality of 6PGD allozymes in E. coli and the effects of genetic background.

Authors:  D Dykhuizen; D L Hartl
Journal:  Genetics       Date:  1980-12       Impact factor: 4.562

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  65 in total

1.  The spatial profiles and metabolic capabilities of microbial populations impact the growth of antibiotic-resistant mutants.

Authors:  Karishma S Kaushik; Nalin Ratnayeke; Parag Katira; Vernita D Gordon
Journal:  J R Soc Interface       Date:  2015-06-06       Impact factor: 4.118

2.  Imperfect drug penetration leads to spatial monotherapy and rapid evolution of multidrug resistance.

Authors:  Stefany Moreno-Gamez; Alison L Hill; Daniel I S Rosenbloom; Dmitri A Petrov; Martin A Nowak; Pleuni S Pennings
Journal:  Proc Natl Acad Sci U S A       Date:  2015-05-18       Impact factor: 11.205

3.  You cannot tell a book by looking at the cover: Cryptic complexity in bacterial evolution.

Authors:  Qiucen Zhang; Julia Bos; Grigory Tarnopolskiy; James C Sturm; Hyunsung Kim; Nader Pourmand; Robert H Austin
Journal:  Biomicrofluidics       Date:  2014-09-09       Impact factor: 2.800

4.  Spatiotemporal microbial evolution on antibiotic landscapes.

Authors:  Michael Baym; Tami D Lieberman; Eric D Kelsic; Remy Chait; Rotem Gross; Idan Yelin; Roy Kishony
Journal:  Science       Date:  2016-09-09       Impact factor: 47.728

5.  Diffusion-driven enhancement of the antibiotic resistance selection window.

Authors:  Ayari Fuentes-Hernández; Anastasia Hernández-Koutoucheva; Alán F Muñoz; Raúl Domínguez Palestino; Rafael Peña-Miller
Journal:  J R Soc Interface       Date:  2019-09-11       Impact factor: 4.118

6.  Allele surfing promotes microbial adaptation from standing variation.

Authors:  Matti Gralka; Fabian Stiewe; Fred Farrell; Wolfram Möbius; Bartlomiej Waclaw; Oskar Hallatschek
Journal:  Ecol Lett       Date:  2016-06-16       Impact factor: 9.492

7.  The innate growth bistability and fitness landscapes of antibiotic-resistant bacteria.

Authors:  J Barrett Deris; Minsu Kim; Zhongge Zhang; Hiroyuki Okano; Rutger Hermsen; Alexander Groisman; Terence Hwa
Journal:  Science       Date:  2013-11-29       Impact factor: 47.728

8.  A computational tool integrating host immunity with antibiotic dynamics to study tuberculosis treatment.

Authors:  Elsje Pienaar; Nicholas A Cilfone; Philana Ling Lin; Véronique Dartois; Joshua T Mattila; J Russell Butler; JoAnne L Flynn; Denise E Kirschner; Jennifer J Linderman
Journal:  J Theor Biol       Date:  2014-12-09       Impact factor: 2.691

9.  Price equation captures the role of drug interactions and collateral effects in the evolution of multidrug resistance.

Authors:  Erida Gjini; Kevin B Wood
Journal:  Elife       Date:  2021-07-22       Impact factor: 8.140

Review 10.  Turning ecology and evolution against cancer.

Authors:  Kirill S Korolev; Joao B Xavier; Jeff Gore
Journal:  Nat Rev Cancer       Date:  2014-04-17       Impact factor: 60.716

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