Literature DB >> 21219151

Lessons in fluctuation correlation spectroscopy.

Michelle A Digman1, Enrico Gratton.   

Abstract

Molecular diffusion and transport processes are fundamental in physical, chemical, and biological systems. Current approaches to measuring molecular transport in cells and tissues based on perturbation methods, e.g., fluorescence recovery after photobleaching, are invasive; single-point fluctuation correlation methods are local; and single-particle tracking requires the observation of isolated particles for relatively long periods of time. We discuss here the detection of molecular transport by exploiting spatiotemporal correlations measured among points at large distances (>1 μm). We illustrate the evolution of the conceptual framework that started with single-point fluorescence fluctuation analysis based on the transit of fluorescent molecules through a small volume of illumination. This idea has evolved to include the measurement of fluctuations at many locations in the sample using microscopy imaging methods. Image fluctuation analysis has become a rich and powerful technique that can be used to extract information about the spatial distribution of molecular concentration and transport in cells and tissues.

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Year:  2011        PMID: 21219151      PMCID: PMC3576135          DOI: 10.1146/annurev-physchem-032210-103424

Source DB:  PubMed          Journal:  Annu Rev Phys Chem        ISSN: 0066-426X            Impact factor:   12.703


  84 in total

1.  Fluorescence intensity multiple distributions analysis: concurrent determination of diffusion times and molecular brightness.

Authors:  K Palo; U Mets; S Jäger; P Kask; K Gall
Journal:  Biophys J       Date:  2000-12       Impact factor: 4.033

2.  Counting and behavior of an individual fluorescent molecule without hydrodynamic flow, immobilization, or photon count statistics.

Authors:  Zeno Földes-Papp; Gerd Baumann; Ulrike Demel; Gernot P Tilz
Journal:  Curr Pharm Biotechnol       Date:  2004-04       Impact factor: 2.837

3.  Spatial mapping of integrin interactions and dynamics during cell migration by image correlation microscopy.

Authors:  Paul W Wiseman; Claire M Brown; Donna J Webb; Benedict Hebert; Natalie L Johnson; Jeff A Squier; Mark H Ellisman; A F Horwitz
Journal:  J Cell Sci       Date:  2004-10-12       Impact factor: 5.285

4.  Fluctuation correlation spectroscopy with a laser-scanning microscope: exploiting the hidden time structure.

Authors:  Michelle A Digman; Parijat Sengupta; Paul W Wiseman; Claire M Brown; Alan R Horwitz; Enrico Gratton
Journal:  Biophys J       Date:  2005-03-25       Impact factor: 4.033

5.  Probing the integrin-actin linkage using high-resolution protein velocity mapping.

Authors:  Claire M Brown; Benedict Hebert; David L Kolin; Jessica Zareno; Leanna Whitmore; Alan Rick Horwitz; Paul W Wiseman
Journal:  J Cell Sci       Date:  2006-12-15       Impact factor: 5.285

6.  Dual-color photon counting histogram analysis of mRFP1 and EGFP in living cells.

Authors:  Lindsey N Hillesheim; Yan Chen; Joachim D Müller
Journal:  Biophys J       Date:  2006-09-15       Impact factor: 4.033

7.  Probability distribution analysis of single-molecule fluorescence anisotropy and resonance energy transfer.

Authors:  Stanislav Kalinin; Suren Felekyan; Matthew Antonik; Claus A M Seidel
Journal:  J Phys Chem B       Date:  2007-08-03       Impact factor: 2.991

8.  Modular scanning FCS quantifies receptor-ligand interactions in living multicellular organisms.

Authors:  Jonas Ries; Shuizi Rachel Yu; Markus Burkhardt; Michael Brand; Petra Schwille
Journal:  Nat Methods       Date:  2009-08-02       Impact factor: 28.547

9.  Image correlation spectroscopy. II. Optimization for ultrasensitive detection of preexisting platelet-derived growth factor-beta receptor oligomers on intact cells.

Authors:  P W Wiseman; N O Petersen
Journal:  Biophys J       Date:  1999-02       Impact factor: 4.033

10.  Theory of sample translation in fluorescence correlation spectroscopy.

Authors:  A G Palmer; N L Thompson
Journal:  Biophys J       Date:  1987-02       Impact factor: 4.033

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  61 in total

1.  Imaging fluorescence (cross-) correlation spectroscopy in live cells and organisms.

Authors:  Jan W Krieger; Anand P Singh; Nirmalya Bag; Christoph S Garbe; Timothy E Saunders; Jörg Langowski; Thorsten Wohland
Journal:  Nat Protoc       Date:  2015-11-05       Impact factor: 13.491

Review 2.  Nanoscale membrane organization: where biochemistry meets advanced microscopy.

Authors:  Alessandra Cambi; Diane S Lidke
Journal:  ACS Chem Biol       Date:  2011-11-14       Impact factor: 5.100

Review 3.  The spatiotemporal organization of ErbB receptors: insights from microscopy.

Authors:  Christopher C Valley; Keith A Lidke; Diane S Lidke
Journal:  Cold Spring Harb Perspect Biol       Date:  2014-02-01       Impact factor: 10.005

4.  Correction of cell-induced optical aberrations in a fluorescence fluctuation microscope.

Authors:  Charles-Edouard Leroux; Alexei Grichine; Irène Wang; Antoine Delon
Journal:  Opt Lett       Date:  2013-07-15       Impact factor: 3.776

Review 5.  Fluorescence correlation spectroscopy: past, present, future.

Authors:  Elliot L Elson
Journal:  Biophys J       Date:  2011-12-20       Impact factor: 4.033

6.  Direct Quantification of Solute Diffusivity in Agarose and Articular Cartilage Using Correlation Spectroscopy.

Authors:  Janty S Shoga; Brian T Graham; Liyun Wang; Christopher Price
Journal:  Ann Biomed Eng       Date:  2017-06-13       Impact factor: 3.934

7.  Fluorescent correlation spectroscopy measurements with adaptive optics in the intercellular space of spheroids.

Authors:  Charles-Edouard Leroux; Sylvain Monnier; Irène Wang; Giovanni Cappello; Antoine Delon
Journal:  Biomed Opt Express       Date:  2014-09-29       Impact factor: 3.732

8.  High-throughput fluorescence correlation spectroscopy enables analysis of proteome dynamics in living cells.

Authors:  Malte Wachsmuth; Christian Conrad; Jutta Bulkescher; Birgit Koch; Robert Mahen; Mayumi Isokane; Rainer Pepperkok; Jan Ellenberg
Journal:  Nat Biotechnol       Date:  2015-03-16       Impact factor: 54.908

9.  Microsecond and millisecond dynamics in the photosynthetic protein LHCSR1 observed by single-molecule correlation spectroscopy.

Authors:  Toru Kondo; Jesse B Gordon; Alberta Pinnola; Luca Dall'Osto; Roberto Bassi; Gabriela S Schlau-Cohen
Journal:  Proc Natl Acad Sci U S A       Date:  2019-05-17       Impact factor: 11.205

10.  Vectorized data acquisition and fast triple-correlation integrals for Fluorescence Triple Correlation Spectroscopy.

Authors:  William K Ridgeway; David P Millar; James R Williamson
Journal:  Comput Phys Commun       Date:  2012-12-31       Impact factor: 4.390

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