Literature DB >> 22004174

Nanoscale membrane organization: where biochemistry meets advanced microscopy.

Alessandra Cambi1, Diane S Lidke.   

Abstract

Understanding the molecular mechanisms that shape an effective cellular response is a fundamental question in biology. Biochemical measurements have revealed critical information about the order of protein-protein interactions along signaling cascades but lack the resolution to determine kinetics and localization of interactions on the plasma membrane. Furthermore, the local membrane environment influences membrane receptor distributions and dynamics, which in turn influences signal transduction. To measure dynamic protein interactions and elucidate the consequences of membrane architecture interplay, direct measurements at high spatiotemporal resolution are needed. In this review, we discuss the biochemical principles regulating membrane nanodomain formation and protein function, ranging from the lipid nanoenvironment to the cortical cytoskeleton. We also discuss recent advances in fluorescence microscopy that are making it possible to quantify protein organization and biochemical events at the nanoscale in the living cell membrane.

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Year:  2011        PMID: 22004174      PMCID: PMC3262946          DOI: 10.1021/cb200326g

Source DB:  PubMed          Journal:  ACS Chem Biol        ISSN: 1554-8929            Impact factor:   5.100


  107 in total

1.  Distribution of resting and ligand-bound ErbB1 and ErbB2 receptor tyrosine kinases in living cells using number and brightness analysis.

Authors:  Peter Nagy; Jeroen Claus; Thomas M Jovin; Donna J Arndt-Jovin
Journal:  Proc Natl Acad Sci U S A       Date:  2010-09-02       Impact factor: 11.205

2.  Nanoscale organization of the pathogen receptor DC-SIGN mapped by single-molecule high-resolution fluorescence microscopy.

Authors:  Bärbel I de Bakker; Frank de Lange; Alessandra Cambi; Jeroen P Korterik; Erik M H P van Dijk; Niek F van Hulst; Carl G Figdor; Maria F Garcia-Parajo
Journal:  Chemphyschem       Date:  2007-07-16       Impact factor: 3.102

3.  High-density mapping of single-molecule trajectories with photoactivated localization microscopy.

Authors:  Suliana Manley; Jennifer M Gillette; George H Patterson; Hari Shroff; Harald F Hess; Eric Betzig; Jennifer Lippincott-Schwartz
Journal:  Nat Methods       Date:  2008-01-13       Impact factor: 28.547

4.  Live-cell photoactivated localization microscopy of nanoscale adhesion dynamics.

Authors:  Hari Shroff; Catherine G Galbraith; James A Galbraith; Eric Betzig
Journal:  Nat Methods       Date:  2008-04-13       Impact factor: 28.547

5.  The endosomal protein Appl1 mediates Akt substrate specificity and cell survival in vertebrate development.

Authors:  Annette Schenck; Livia Goto-Silva; Claudio Collinet; Muriel Rhinn; Angelika Giner; Bianca Habermann; Michael Brand; Marino Zerial
Journal:  Cell       Date:  2008-05-02       Impact factor: 41.582

6.  Formation and dissociation of M1 muscarinic receptor dimers seen by total internal reflection fluorescence imaging of single molecules.

Authors:  Jonathan A Hern; Asma H Baig; Gregory I Mashanov; Berry Birdsall; John E T Corrie; Sebastian Lazareno; Justin E Molloy; Nigel J M Birdsall
Journal:  Proc Natl Acad Sci U S A       Date:  2010-01-20       Impact factor: 11.205

Review 7.  Greasing their way: lipid modifications determine protein association with membrane rafts.

Authors:  Ilya Levental; Michal Grzybek; Kai Simons
Journal:  Biochemistry       Date:  2010-08-03       Impact factor: 3.162

8.  Direct mapping of nanoscale compositional connectivity on intact cell membranes.

Authors:  Thomas S van Zanten; Jordi Gómez; Carlo Manzo; Alessandra Cambi; Javier Buceta; Ramon Reigada; Maria F Garcia-Parajo
Journal:  Proc Natl Acad Sci U S A       Date:  2010-08-16       Impact factor: 11.205

9.  Actin restricts FcepsilonRI diffusion and facilitates antigen-induced receptor immobilization.

Authors:  Nicholas L Andrews; Keith A Lidke; Janet R Pfeiffer; Alan R Burns; Bridget S Wilson; Janet M Oliver; Diane S Lidke
Journal:  Nat Cell Biol       Date:  2008-07-20       Impact factor: 28.824

10.  Imaging of mobile long-lived nanoplatforms in the live cell plasma membrane.

Authors:  Mario Brameshuber; Julian Weghuber; Verena Ruprecht; Imre Gombos; Ibolya Horváth; László Vigh; Paul Eckerstorfer; Endre Kiss; Hannes Stockinger; Gerhard J Schütz
Journal:  J Biol Chem       Date:  2010-10-21       Impact factor: 5.157

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  18 in total

1.  Evaluation of fluorophores to label SNAP-tag fused proteins for multicolor single-molecule tracking microscopy in live cells.

Authors:  Peter J Bosch; Ivan R Corrêa; Michael H Sonntag; Jenny Ibach; Luc Brunsveld; Johannes S Kanger; Vinod Subramaniam
Journal:  Biophys J       Date:  2014-08-19       Impact factor: 4.033

2.  Classification of dynamical diffusion states in single molecule tracking microscopy.

Authors:  Peter J Bosch; Johannes S Kanger; Vinod Subramaniam
Journal:  Biophys J       Date:  2014-08-05       Impact factor: 4.033

Review 3.  The Growing and Glowing Toolbox of Fluorescent and Photoactive Proteins.

Authors:  Erik A Rodriguez; Robert E Campbell; John Y Lin; Michael Z Lin; Atsushi Miyawaki; Amy E Palmer; Xiaokun Shu; Jin Zhang; Roger Y Tsien
Journal:  Trends Biochem Sci       Date:  2016-11-01       Impact factor: 13.807

4.  Four-color single-molecule imaging with engineered tags resolves the molecular architecture of signaling complexes in the plasma membrane.

Authors:  Junel Sotolongo Bellón; Oliver Birkholz; Christian P Richter; Florian Eull; Hella Kenneweg; Stephan Wilmes; Ulrich Rothbauer; Changjiang You; Mark R Walter; Rainer Kurre; Jacob Piehler
Journal:  Cell Rep Methods       Date:  2022-02-04

5.  Illuminating the lateral organization of cell-surface CD24 and CD44 through plasmon coupling between Au nanoparticle immunolabels.

Authors:  Xinwei Yu; Jing Wang; Amin Feizpour; Björn M Reinhard
Journal:  Anal Chem       Date:  2013-01-22       Impact factor: 6.986

Review 6.  Optical sensors to gain mechanistic insights into signaling assemblies.

Authors:  Brian Tenner; Sohum Mehta; Jin Zhang
Journal:  Curr Opin Struct Biol       Date:  2016-09-06       Impact factor: 6.809

7.  Epidermal growth factor receptor subunit locations determined in hydrated cells with environmental scanning electron microscopy.

Authors:  Diana B Peckys; Jean-Pierre Baudoin; Magdalena Eder; Ulf Werner; Niels de Jonge
Journal:  Sci Rep       Date:  2013       Impact factor: 4.379

8.  Glycan-based DC-SIGN targeting to enhance antigen cross-presentation in anticancer vaccines.

Authors:  Juan J García-Vallejo; Wendy W J Unger; Hakan Kalay; Yvette van Kooyk
Journal:  Oncoimmunology       Date:  2013-02-01       Impact factor: 8.110

9.  Ligand binding and signaling of dendritic cell immunoreceptor (DCIR) is modulated by the glycosylation of the carbohydrate recognition domain.

Authors:  Karien Bloem; Ilona M Vuist; Arend-Jan van der Plas; Léon M J Knippels; Johan Garssen; Juan J García-Vallejo; Sandra J van Vliet; Yvette van Kooyk
Journal:  PLoS One       Date:  2013-06-11       Impact factor: 3.240

10.  Local variations of HER2 dimerization in breast cancer cells discovered by correlative fluorescence and liquid electron microscopy.

Authors:  Diana B Peckys; Ulrike Korf; Niels de Jonge
Journal:  Sci Adv       Date:  2015-07-17       Impact factor: 14.136

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