| Literature DB >> 21202976 |
Ozden Ozel Güven, Taner Erdoğan, Simon J Coles, Tuncer Hökelek.
Abstract
In the mol-ecule of the title compound, C(15)H(12)N(2)O, the planar benzimidazole system is oriented at a dihedral angle of 80.43 (5)° with respect to the phenyl ring. In the crystal structure, non-classical inter-molecular C-H⋯N and C-H⋯O hydrogen bonds link the mol-ecules into layers parallel to the ab plane.Entities:
Year: 2008 PMID: 21202976 PMCID: PMC2961837 DOI: 10.1107/S1600536808019107
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C15H12N2O | |
| Monoclinic, | Mo |
| Hall symbol: P 2yb | Cell parameters from 1379 reflections |
| θ = 2.9–27.5º | |
| µ = 0.09 mm−1 | |
| β = 96.620 (3)º | Plate, colorless |
| 0.45 × 0.22 × 0.03 mm | |
| Bruker–Nonius Roper CCD camera on κ-goniostat diffractometer | 2639 independent reflections |
| Radiation source: fine-focus sealed tube | 2265 reflections with |
| Monochromator: graphite | |
| Detector resolution: 9.091 pixels mm-1 | θmax = 27.5º |
| θmin = 3.6º | |
| φ and ω scans | |
| Absorption correction: multi-scan(SADABS; Sheldrick, 2007) | |
| 6918 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| All H-atom parameters refined | |
| | |
| (Δ/σ)max < 0.001 | |
| 2639 reflections | Δρmax = 0.23 e Å−3 |
| 212 parameters | Δρmin = −0.22 e Å−3 |
| 1 restraint | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.091 (14) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.0968 (3) | 0.55671 (14) | 0.26162 (13) | 0.0288 (4) | |
| N1 | 0.3784 (3) | 0.56655 (14) | 0.05460 (15) | 0.0236 (4) | |
| N2 | 0.3592 (4) | 0.41520 (16) | −0.08838 (17) | 0.0301 (4) | |
| C1 | 0.4848 (4) | 0.46224 (19) | 0.0180 (2) | 0.0265 (4) | |
| H1 | 0.651 (6) | 0.432 (3) | 0.074 (3) | 0.048 (7)* | |
| C2 | 0.1553 (4) | 0.49603 (17) | −0.12561 (19) | 0.0251 (4) | |
| C3 | −0.0424 (4) | 0.49415 (19) | −0.2318 (2) | 0.0288 (5) | |
| H3 | −0.051 (5) | 0.422 (2) | −0.291 (2) | 0.034 (6)* | |
| C4 | −0.2249 (4) | 0.5857 (2) | −0.2443 (2) | 0.0315 (5) | |
| H4 | −0.366 (5) | 0.584 (3) | −0.317 (3) | 0.045 (7)* | |
| C5 | −0.2133 (4) | 0.67987 (19) | −0.1537 (2) | 0.0293 (5) | |
| H5 | −0.340 (4) | 0.742 (2) | −0.168 (2) | 0.020 (5)* | |
| C6 | −0.0171 (4) | 0.68387 (18) | −0.0477 (2) | 0.0258 (4) | |
| H6 | −0.013 (5) | 0.753 (3) | 0.011 (3) | 0.048 (7)* | |
| C7 | 0.1634 (4) | 0.59090 (17) | −0.03658 (18) | 0.0237 (4) | |
| C8 | 0.4659 (4) | 0.63860 (18) | 0.16674 (18) | 0.0241 (4) | |
| H81 | 0.481 (4) | 0.720 (2) | 0.143 (2) | 0.025 (5)* | |
| H82 | 0.642 (4) | 0.609 (2) | 0.203 (2) | 0.025 (5)* | |
| C9 | 0.2788 (4) | 0.62815 (17) | 0.27150 (18) | 0.0222 (4) | |
| C10 | 0.3283 (4) | 0.70936 (18) | 0.38542 (18) | 0.0226 (4) | |
| C11 | 0.5216 (4) | 0.79730 (19) | 0.39188 (18) | 0.0273 (5) | |
| H11 | 0.646 (4) | 0.805 (2) | 0.326 (2) | 0.024 (5)* | |
| C12 | 0.5582 (4) | 0.8738 (2) | 0.4985 (2) | 0.0310 (5) | |
| H12 | 0.695 (5) | 0.934 (2) | 0.503 (2) | 0.031 (6)* | |
| C13 | 0.3975 (4) | 0.8617 (2) | 0.5977 (2) | 0.0351 (5) | |
| H13 | 0.420 (5) | 0.920 (3) | 0.678 (3) | 0.047 (7)* | |
| C14 | 0.2068 (5) | 0.7743 (2) | 0.5926 (2) | 0.0352 (5) | |
| H14 | 0.089 (6) | 0.761 (3) | 0.658 (3) | 0.061 (9)* | |
| C15 | 0.1691 (4) | 0.69726 (19) | 0.4872 (2) | 0.0284 (5) | |
| H15 | 0.036 (4) | 0.636 (2) | 0.481 (2) | 0.025 (6)* |
| O1 | 0.0307 (7) | 0.0341 (8) | 0.0215 (7) | −0.0053 (6) | 0.0026 (5) | 0.0005 (6) |
| N1 | 0.0279 (8) | 0.0236 (8) | 0.0200 (8) | −0.0005 (7) | 0.0049 (6) | −0.0003 (6) |
| N2 | 0.0377 (9) | 0.0257 (8) | 0.0282 (9) | −0.0016 (8) | 0.0098 (7) | −0.0009 (7) |
| C1 | 0.0316 (10) | 0.0239 (9) | 0.0249 (10) | −0.0013 (8) | 0.0071 (8) | 0.0010 (8) |
| C2 | 0.0276 (9) | 0.0245 (10) | 0.0245 (10) | −0.0034 (8) | 0.0085 (7) | −0.0015 (8) |
| C3 | 0.0341 (10) | 0.0313 (11) | 0.0219 (10) | −0.0098 (9) | 0.0075 (8) | −0.0055 (8) |
| C4 | 0.0300 (11) | 0.0417 (12) | 0.0230 (10) | −0.0051 (9) | 0.0034 (8) | 0.0013 (8) |
| C5 | 0.0303 (10) | 0.0336 (12) | 0.0244 (10) | 0.0019 (9) | 0.0052 (8) | 0.0009 (8) |
| C6 | 0.0297 (10) | 0.0265 (10) | 0.0222 (9) | 0.0016 (8) | 0.0072 (7) | −0.0015 (8) |
| C7 | 0.0271 (9) | 0.0276 (10) | 0.0170 (9) | −0.0050 (8) | 0.0045 (7) | 0.0006 (8) |
| C8 | 0.0269 (10) | 0.0256 (11) | 0.0200 (9) | −0.0007 (8) | 0.0029 (8) | −0.0002 (8) |
| C9 | 0.0210 (9) | 0.0241 (9) | 0.0207 (9) | 0.0012 (8) | −0.0003 (7) | 0.0034 (7) |
| C10 | 0.0249 (9) | 0.0246 (9) | 0.0173 (9) | 0.0043 (8) | −0.0022 (7) | 0.0027 (7) |
| C11 | 0.0293 (10) | 0.0311 (11) | 0.0218 (10) | −0.0011 (9) | 0.0041 (8) | 0.0027 (8) |
| C12 | 0.0378 (11) | 0.0294 (11) | 0.0248 (10) | −0.0045 (10) | −0.0001 (9) | −0.0017 (8) |
| C13 | 0.0464 (13) | 0.0341 (12) | 0.0248 (11) | −0.0012 (10) | 0.0043 (9) | −0.0040 (9) |
| C14 | 0.0414 (11) | 0.0437 (13) | 0.0222 (10) | −0.0004 (10) | 0.0101 (9) | −0.0020 (9) |
| C15 | 0.0297 (10) | 0.0311 (11) | 0.0243 (10) | −0.0029 (9) | 0.0032 (7) | 0.0015 (8) |
| O1—C9 | 1.215 (2) | C7—C2 | 1.406 (3) |
| N1—C1 | 1.361 (3) | C8—H81 | 0.95 (3) |
| N1—C7 | 1.381 (2) | C8—H82 | 0.98 (2) |
| N1—C8 | 1.442 (3) | C9—C8 | 1.522 (3) |
| N2—C1 | 1.317 (3) | C10—C9 | 1.489 (3) |
| N2—C2 | 1.393 (3) | C10—C15 | 1.403 (3) |
| C1—H1 | 1.02 (3) | C11—C10 | 1.384 (3) |
| C3—C2 | 1.398 (3) | C11—C12 | 1.394 (3) |
| C3—C4 | 1.377 (3) | C11—H11 | 0.99 (2) |
| C3—H3 | 1.01 (3) | C12—H12 | 0.96 (3) |
| C4—H4 | 0.98 (3) | C13—C12 | 1.386 (3) |
| C5—C4 | 1.410 (3) | C13—C14 | 1.371 (3) |
| C5—H5 | 0.95 (2) | C13—H13 | 1.06 (3) |
| C6—C5 | 1.391 (3) | C14—C15 | 1.389 (3) |
| C6—C7 | 1.382 (3) | C14—H14 | 0.96 (3) |
| C6—H6 | 0.99 (3) | C15—H15 | 0.96 (2) |
| C1—N1—C7 | 106.55 (16) | N1—C8—H81 | 111.1 (13) |
| C1—N1—C8 | 127.82 (17) | N1—C8—H82 | 107.2 (13) |
| C7—N1—C8 | 125.63 (16) | C9—C8—H81 | 109.4 (13) |
| C1—N2—C2 | 103.83 (17) | C9—C8—H82 | 108.0 (13) |
| N1—C1—H1 | 116.9 (16) | H81—C8—H82 | 109.1 (19) |
| N2—C1—N1 | 114.25 (18) | O1—C9—C8 | 121.07 (16) |
| N2—C1—H1 | 128.8 (16) | O1—C9—C10 | 121.84 (17) |
| N2—C2—C3 | 130.22 (18) | C10—C9—C8 | 117.10 (15) |
| N2—C2—C7 | 110.35 (17) | C11—C10—C9 | 121.91 (17) |
| C3—C2—C7 | 119.43 (18) | C11—C10—C15 | 119.61 (18) |
| C2—C3—H3 | 117.7 (14) | C15—C10—C9 | 118.47 (18) |
| C4—C3—C2 | 118.14 (19) | C10—C11—C12 | 120.42 (18) |
| C4—C3—H3 | 124.0 (14) | C10—C11—H11 | 122.1 (13) |
| C3—C4—C5 | 121.5 (2) | C12—C11—H11 | 117.4 (13) |
| C3—C4—H4 | 118.4 (17) | C13—C12—C11 | 119.4 (2) |
| C5—C4—H4 | 120.1 (17) | C13—C12—H12 | 120.8 (15) |
| C6—C5—C4 | 121.3 (2) | C11—C12—H12 | 119.8 (15) |
| C6—C5—H5 | 120.4 (13) | C12—C13—H13 | 120.3 (15) |
| C4—C5—H5 | 118.3 (13) | C14—C13—C12 | 120.7 (2) |
| C5—C6—H6 | 118.1 (15) | C14—C13—H13 | 119.0 (15) |
| C7—C6—C5 | 116.34 (19) | C13—C14—C15 | 120.5 (2) |
| C7—C6—H6 | 125.5 (15) | C13—C14—H14 | 125 (2) |
| N1—C7—C2 | 105.01 (16) | C15—C14—H14 | 115 (2) |
| N1—C7—C6 | 131.69 (17) | C10—C15—H15 | 118.6 (13) |
| C6—C7—C2 | 123.30 (18) | C14—C15—C10 | 119.4 (2) |
| N1—C8—C9 | 111.88 (15) | C14—C15—H15 | 122.0 (13) |
| C7—N1—C1—N2 | −0.3 (2) | N1—C7—C2—N2 | 0.66 (19) |
| C8—N1—C1—N2 | 178.87 (18) | N1—C7—C2—C3 | −179.80 (17) |
| C1—N1—C7—C2 | −0.21 (18) | C6—C7—C2—N2 | −179.13 (17) |
| C1—N1—C7—C6 | 179.6 (2) | C6—C7—C2—C3 | 0.4 (3) |
| C8—N1—C7—C2 | −179.44 (17) | O1—C9—C8—N1 | 7.0 (2) |
| C8—N1—C7—C6 | 0.3 (3) | C10—C9—C8—N1 | −172.76 (16) |
| C1—N1—C8—C9 | −105.9 (2) | C11—C10—C9—O1 | −174.63 (18) |
| C7—N1—C8—C9 | 73.2 (2) | C11—C10—C9—C8 | 5.1 (3) |
| C2—N2—C1—N1 | 0.7 (2) | C15—C10—C9—O1 | 3.9 (3) |
| C1—N2—C2—C3 | 179.7 (2) | C15—C10—C9—C8 | −176.38 (17) |
| C1—N2—C2—C7 | −0.8 (2) | C9—C10—C15—C14 | −178.14 (19) |
| C4—C3—C2—N2 | 178.8 (2) | C11—C10—C15—C14 | 0.4 (3) |
| C4—C3—C2—C7 | −0.7 (3) | C10—C11—C12—C13 | −0.6 (3) |
| C2—C3—C4—C5 | 0.6 (3) | C12—C11—C10—C9 | 178.37 (18) |
| C6—C5—C4—C3 | −0.2 (3) | C12—C11—C10—C15 | −0.1 (3) |
| C5—C6—C7—N1 | −179.7 (2) | C14—C13—C12—C11 | 1.1 (3) |
| C5—C6—C7—C2 | 0.0 (3) | C12—C13—C14—C15 | −0.8 (3) |
| C7—C6—C5—C4 | −0.1 (3) | C13—C14—C15—C10 | 0.0 (3) |
| H··· | ||||
| C8—H81···N2i | 0.95 (2) | 2.43 (2) | 3.355 (3) | 165.2 (17) |
| C8—H82···O1ii | 0.98 (2) | 2.38 (2) | 3.351 (3) | 170.1 (17) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C8—H81⋯N2i | 0.95 (2) | 2.43 (2) | 3.355 (3) | 165.2 (17) |
| C8—H82⋯O1ii | 0.98 (2) | 2.38 (2) | 3.351 (3) | 170.1 (17) |
Symmetry codes: (i) ; (ii) .