| Literature DB >> 21202917 |
Tobias Beck1, George M Sheldrick.
Abstract
The title compound, C(8)H(4)I(3)NO(4)·H(2)O, shows an extensive hydrogen-bond network; in the crystal structure, mol-ecules are linked by O-H⋯O, N-H⋯O and O-H⋯N hydrogen bonds involving all possible donors and also the water mol-ecule.Entities:
Year: 2008 PMID: 21202917 PMCID: PMC2961876 DOI: 10.1107/S1600536808017741
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C8H4I3NO4·H2O | |
| Orthorhombic, | Cu |
| Hall symbol: -P 2ac 2ab | Cell parameters from 9945 reflections |
| θ = 4.7–60.8º | |
| µ = 54.11 mm−1 | |
| Block, yellow | |
| 0.08 × 0.05 × 0.03 mm |
| Bruker SMART 6000 diffractometer | 2716 independent reflections |
| Radiation source: rotating anode | 2545 reflections with |
| Monochromator: INCOATEC multilayer optics | |
| Detector resolution: 5.602 pixels mm-1 | θmax = 74.3º |
| θmin = 4.7º | |
| ω scans | |
| Absorption correction: multi-scan(SADABS; Sheldrick, 1996) | |
| 49139 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: difference Fourier map |
| Only H-atom coordinates refined | |
| | |
| (Δ/σ)max = 0.002 | |
| 2716 reflections | Δρmax = 0.72 e Å−3 |
| 173 parameters | Δρmin = −1.71 e Å−3 |
| 14 restraints | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.000058 (8) |
| Experimental. Intensities were measured with a Bruker |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| I1 | 1.18424 (3) | 0.630616 (18) | 0.012748 (16) | 0.02419 (10) | |
| I2 | 0.71499 (3) | 0.674286 (18) | 0.234093 (15) | 0.02375 (10) | |
| I3 | 1.04238 (3) | 0.979824 (17) | 0.124476 (17) | 0.02693 (10) | |
| C1 | 1.0827 (5) | 0.7970 (3) | 0.0781 (2) | 0.0161 (8) | |
| C2 | 1.0606 (5) | 0.7094 (3) | 0.0789 (2) | 0.0161 (9) | |
| C3 | 0.9544 (5) | 0.6745 (3) | 0.1231 (2) | 0.0153 (9) | |
| C4 | 0.8655 (5) | 0.7276 (3) | 0.1631 (2) | 0.0163 (9) | |
| C5 | 0.8803 (5) | 0.8172 (3) | 0.1604 (2) | 0.0165 (9) | |
| C6 | 0.9945 (5) | 0.8492 (3) | 0.1199 (2) | 0.0180 (9) | |
| C7 | 1.1981 (5) | 0.8362 (3) | 0.0320 (3) | 0.0202 (10) | |
| O8 | 1.1458 (4) | 0.8648 (2) | −0.02803 (18) | 0.0256 (7) | |
| H8 | 1.205 (6) | 0.883 (4) | −0.055 (3) | 0.038* | |
| O9 | 1.3242 (4) | 0.8414 (2) | 0.05017 (19) | 0.0290 (8) | |
| C10 | 0.9364 (5) | 0.5794 (3) | 0.1285 (2) | 0.0173 (9) | |
| O11 | 1.0376 (4) | 0.5445 (2) | 0.16663 (17) | 0.0224 (7) | |
| H11 | 1.031 (7) | 0.494 (3) | 0.170 (3) | 0.034* | |
| O12 | 0.8358 (4) | 0.54161 (19) | 0.10032 (17) | 0.0213 (7) | |
| N13 | 0.7889 (5) | 0.8702 (2) | 0.1997 (2) | 0.0210 (8) | |
| H13A | 0.698 (5) | 0.855 (4) | 0.204 (3) | 0.031* | |
| H13B | 0.785 (6) | 0.922 (3) | 0.183 (3) | 0.031* | |
| O14 | 1.0395 (4) | 0.3834 (2) | 0.17540 (18) | 0.0235 (7) | |
| H14A | 1.074 (7) | 0.366 (4) | 0.139 (3) | 0.035* | |
| H14B | 1.099 (6) | 0.376 (4) | 0.206 (3) | 0.035* |
| I1 | 0.02850 (18) | 0.02100 (16) | 0.02307 (16) | 0.00785 (12) | 0.00724 (12) | 0.00027 (11) |
| I2 | 0.02603 (18) | 0.02156 (16) | 0.02364 (16) | −0.00544 (11) | 0.00910 (12) | −0.00016 (11) |
| I3 | 0.02852 (19) | 0.01260 (15) | 0.03966 (19) | −0.00146 (11) | 0.00662 (13) | 0.00096 (11) |
| C1 | 0.018 (2) | 0.0143 (19) | 0.0162 (19) | 0.0012 (17) | 0.0007 (17) | 0.0000 (16) |
| C2 | 0.019 (2) | 0.014 (2) | 0.0150 (19) | 0.0033 (17) | −0.0002 (17) | −0.0002 (16) |
| C3 | 0.020 (2) | 0.013 (2) | 0.0135 (19) | 0.0006 (17) | −0.0052 (17) | 0.0019 (15) |
| C4 | 0.018 (2) | 0.016 (2) | 0.0150 (19) | −0.0072 (16) | 0.0005 (17) | 0.0017 (16) |
| C5 | 0.018 (2) | 0.015 (2) | 0.016 (2) | 0.0003 (17) | −0.0023 (17) | −0.0006 (16) |
| C6 | 0.023 (2) | 0.013 (2) | 0.017 (2) | −0.0022 (18) | −0.0013 (18) | 0.0009 (16) |
| C7 | 0.023 (3) | 0.014 (2) | 0.023 (2) | −0.0007 (17) | 0.0010 (19) | −0.0016 (17) |
| O8 | 0.0251 (19) | 0.0276 (18) | 0.0241 (17) | −0.0019 (14) | 0.0036 (15) | 0.0093 (14) |
| O9 | 0.0216 (19) | 0.038 (2) | 0.0276 (18) | −0.0045 (15) | 0.0035 (15) | 0.0013 (15) |
| C10 | 0.023 (2) | 0.014 (2) | 0.015 (2) | −0.0007 (18) | 0.0048 (18) | 0.0001 (16) |
| O11 | 0.0274 (18) | 0.0132 (15) | 0.0265 (17) | −0.0007 (13) | −0.0074 (14) | 0.0043 (13) |
| O12 | 0.0279 (18) | 0.0121 (14) | 0.0239 (16) | −0.0039 (13) | −0.0064 (14) | 0.0014 (12) |
| N13 | 0.021 (2) | 0.0148 (18) | 0.027 (2) | 0.0019 (15) | 0.0035 (17) | −0.0026 (15) |
| O14 | 0.0255 (19) | 0.0217 (16) | 0.0233 (17) | 0.0028 (14) | −0.0003 (14) | 0.0027 (14) |
| I1—C2 | 2.094 (4) | C5—N13 | 1.396 (6) |
| I2—C4 | 2.100 (4) | C7—O9 | 1.214 (6) |
| I3—C6 | 2.103 (4) | C7—O8 | 1.308 (6) |
| C1—C2 | 1.394 (6) | O8—H8 | 0.80 (5) |
| C1—C6 | 1.398 (6) | C10—O12 | 1.223 (6) |
| C1—C7 | 1.504 (6) | C10—O11 | 1.299 (6) |
| C2—C3 | 1.396 (6) | O11—H11 | 0.79 (5) |
| C3—C4 | 1.391 (6) | N13—H13A | 0.88 (4) |
| C3—C10 | 1.509 (6) | N13—H13B | 0.88 (4) |
| C4—C5 | 1.418 (6) | O14—H14A | 0.81 (4) |
| C5—C6 | 1.393 (6) | O14—H14B | 0.81 (4) |
| C2—C1—C6 | 119.4 (4) | C5—C6—C1 | 122.3 (4) |
| C2—C1—C7 | 121.0 (4) | C5—C6—I3 | 119.3 (3) |
| C6—C1—C7 | 119.6 (4) | C1—C6—I3 | 118.4 (3) |
| C1—C2—C3 | 119.8 (4) | O9—C7—O8 | 125.0 (4) |
| C1—C2—I1 | 120.0 (3) | O9—C7—C1 | 122.7 (4) |
| C3—C2—I1 | 120.2 (3) | O8—C7—C1 | 112.3 (4) |
| C4—C3—C2 | 120.0 (4) | C7—O8—H8 | 115 (5) |
| C4—C3—C10 | 119.6 (4) | O12—C10—O11 | 125.3 (4) |
| C2—C3—C10 | 120.4 (4) | O12—C10—C3 | 122.5 (4) |
| C3—C4—C5 | 121.3 (4) | O11—C10—C3 | 112.3 (4) |
| C3—C4—I2 | 119.6 (3) | C10—O11—H11 | 114 (5) |
| C5—C4—I2 | 119.0 (3) | C5—N13—H13A | 117 (4) |
| C6—C5—N13 | 122.0 (4) | C5—N13—H13B | 113 (4) |
| C6—C5—C4 | 116.9 (4) | H13A—N13—H13B | 105 (6) |
| N13—C5—C4 | 121.0 (4) | H14A—O14—H14B | 108 (6) |
| C6—C1—C2—C3 | −2.2 (6) | N13—C5—C6—C1 | −177.4 (4) |
| C7—C1—C2—C3 | 179.0 (4) | C4—C5—C6—C1 | 6.0 (6) |
| C6—C1—C2—I1 | 176.7 (3) | N13—C5—C6—I3 | 5.2 (5) |
| C7—C1—C2—I1 | −2.0 (5) | C4—C5—C6—I3 | −171.4 (3) |
| C1—C2—C3—C4 | 3.5 (6) | C2—C1—C6—C5 | −2.8 (6) |
| I1—C2—C3—C4 | −175.4 (3) | C7—C1—C6—C5 | 176.0 (4) |
| C1—C2—C3—C10 | −175.6 (4) | C2—C1—C6—I3 | 174.7 (3) |
| I1—C2—C3—C10 | 5.5 (5) | C7—C1—C6—I3 | −6.5 (5) |
| C2—C3—C4—C5 | −0.1 (6) | C2—C1—C7—O9 | −84.0 (6) |
| C10—C3—C4—C5 | 179.1 (4) | C6—C1—C7—O9 | 97.2 (5) |
| C2—C3—C4—I2 | −176.2 (3) | C2—C1—C7—O8 | 97.3 (5) |
| C10—C3—C4—I2 | 3.0 (5) | C6—C1—C7—O8 | −81.5 (5) |
| C3—C4—C5—C6 | −4.6 (6) | C4—C3—C10—O12 | 75.4 (5) |
| I2—C4—C5—C6 | 171.5 (3) | C2—C3—C10—O12 | −105.5 (5) |
| C3—C4—C5—N13 | 178.8 (4) | C4—C3—C10—O11 | −103.6 (4) |
| I2—C4—C5—N13 | −5.1 (5) | C2—C3—C10—O11 | 75.5 (5) |
| H··· | ||||
| O11—H11···O14 | 0.79 (5) | 1.75 (5) | 2.540 (5) | 173 (7) |
| O8—H8···O12i | 0.80 (5) | 1.90 (5) | 2.662 (5) | 161 (7) |
| O14—H14A···O9ii | 0.81 (4) | 1.95 (4) | 2.751 (5) | 170 (6) |
| O14—H14B···N13iii | 0.81 (4) | 2.05 (4) | 2.841 (5) | 166 (6) |
| N13—H13A···O14iv | 0.88 (4) | 2.30 (5) | 3.067 (6) | 147 (5) |
| N13—H13B···O12iv | 0.88 (4) | 2.68 (5) | 3.478 (5) | 152 (5) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O11—H11⋯O14 | 0.79 (5) | 1.75 (5) | 2.540 (5) | 173 (7) |
| O8—H8⋯O12i | 0.80 (5) | 1.90 (5) | 2.662 (5) | 161 (7) |
| O14—H14 | 0.81 (4) | 1.95 (4) | 2.751 (5) | 170 (6) |
| O14—H14 | 0.81 (4) | 2.05 (4) | 2.841 (5) | 166 (6) |
| N13—H13 | 0.88 (4) | 2.30 (5) | 3.067 (6) | 147 (5) |
| N13—H13 | 0.88 (4) | 2.68 (5) | 3.478 (5) | 152 (5) |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .