Literature DB >> 21202876

rac-(1S,2R)-Diethyl 6-hydr-oxy-1-(4-methoxy-phen-yl)-3-oxo-2,3-di-hydro-1H-benzo[f]chromen-2-yl]-phospho-nate.

Jakub Wojciechowski, Henryk Krawczyk, Lukasz Albrecht, Wojciech M Wolf.   

Abstract

In the title compound, C(24)H(25)O(7)P, the δ-valerolactonyl ring exists in a distorted screw-boat conformation with the diethoxy-phosphoryl substituent occupying an axial position. The latter adopts an almost syn-periplanar conformation around the P-C bond. The mol-ecules form centrosymmetric dimers connected by O-H⋯O hydrogen bonds.

Entities:  

Year:  2008        PMID: 21202876      PMCID: PMC2961657          DOI: 10.1107/S1600536808015857

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of 4-aryl-3,4-dihydro­coumarins, see: Bailly et al. (2003 ▶); Roelens et al. (2005 ▶); Zhang et al. (2006 ▶). For their synthesis, see: Aoki et al. (2005 ▶); Krawczyk et al. (2007a ▶); Li et al. (2005 ▶); Rizzi et al. (2006 ▶). For a comparison structure, see: Krawczyk et al. (2007b ▶). For the atomic charges fitted to electrostatic potential, see: Frisch et al. (2004 ▶); Breneman & Wiberg (1990 ▶). For repulsive interactions between O atoms, see: Gillespie & Popelier, (2001 ▶). For hydrogen-bond graph-set terminology, see: Bernstein et al. (1995 ▶); Etter (1990 ▶). For ring puckering analysis, see: Boeyens (1978 ▶); Cremer & Pople (1975 ▶); Frisch et al. (2004 ▶). For details of the Cambridge Structural Database, see: Allen (2002 ▶).

Experimental

Crystal data

C24H25O7P M = 456.41 Monoclinic, a = 21.6231 (17) Å b = 10.0018 (8) Å c = 22.4011 (17) Å β = 111.806 (1)° V = 4498.0 (6) Å3 Z = 8 Mo Kα radiation μ = 0.17 mm−1 T = 293 (2) K 0.30 × 0.20 × 0.15 mm

Data collection

Bruker SMART APEX diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2003 ▶) T min = 0.951, T max = 0.976 37601 measured reflections 5076 independent reflections 3585 reflections with I > 2σ(I) R int = 0.043

Refinement

R[F 2 > 2σ(F 2)] = 0.045 wR(F 2) = 0.137 S = 1.05 5076 reflections 310 parameters H-atom parameters constrained Δρmax = 0.30 e Å−3 Δρmin = −0.36 e Å−3 Data collection: SMART (Bruker, 2003 ▶); cell refinement: SAINT-Plus (Bruker, 2003 ▶); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL and publCIF (Westrip, 2008 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808015857/ng2458sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808015857/ng2458Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report Enhanced figure: interactive version of Fig. 4
C24H25O7PDx = 1.348 Mg m3
Mr = 456.41Melting point = 396–398 K
Monoclinic, C2/cMo Kα radiation λ = 0.71073 Å
a = 21.6231 (17) ÅCell parameters from 8721 reflections
b = 10.0018 (8) Åθ = 2.2–23.3º
c = 22.4011 (17) ŵ = 0.17 mm1
β = 111.8060 (10)ºT = 293 (2) K
V = 4498.0 (6) Å3Prism, colourless
Z = 80.30 × 0.20 × 0.15 mm
F000 = 1920
Bruker SMART APEX diffractometer5076 independent reflections
Radiation source: fine-focus sealed tube3585 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.044
T = 293(2) Kθmax = 27.4º
ω scansθmin = 2.0º
Absorption correction: multi-scan(SADABS; Bruker, 2003)h = −27→27
Tmin = 0.951, Tmax = 0.976k = −12→12
37601 measured reflectionsl = −28→28
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.045H-atom parameters constrained
wR(F2) = 0.137  w = 1/[σ2(Fo2) + (0.0691P)2 + 2.0425P] where P = (Fo2 + 2Fc2)/3
S = 1.05(Δ/σ)max = 0.001
5076 reflectionsΔρmax = 0.30 e Å3
310 parametersΔρmin = −0.36 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
P0.85826 (2)0.18689 (5)0.93687 (3)0.04719 (16)
O10.86909 (7)0.50338 (13)0.99316 (6)0.0501 (3)
O20.82123 (8)0.38041 (16)1.04447 (7)0.0612 (4)
O30.82989 (9)0.07064 (16)0.96515 (11)0.0843 (6)
O40.92748 (7)0.22132 (16)0.97264 (8)0.0645 (4)
O50.84281 (8)0.14572 (19)0.86632 (8)0.0751 (5)
O61.00680 (7)0.72224 (17)0.90165 (8)0.0694 (5)
O70.54354 (8)0.70103 (17)0.84382 (11)0.0838 (6)
C10.82904 (10)0.40053 (19)0.99520 (10)0.0464 (4)
C20.79907 (9)0.31862 (18)0.93467 (9)0.0445 (4)
C30.77848 (9)0.40694 (18)0.87347 (9)0.0433 (4)
C40.83847 (9)0.49031 (17)0.87772 (9)0.0411 (4)
C50.85316 (9)0.53228 (18)0.82352 (9)0.0432 (4)
C60.91093 (9)0.60975 (19)0.83255 (9)0.0457 (4)
C70.95280 (9)0.6475 (2)0.89610 (10)0.0492 (5)
C80.93774 (10)0.60900 (19)0.94736 (10)0.0484 (5)
C90.88100 (9)0.53133 (18)0.93693 (9)0.0435 (4)
C100.81079 (11)0.5026 (2)0.75920 (10)0.0540 (5)
C110.82642 (13)0.5444 (2)0.70810 (11)0.0616 (6)
C120.88486 (13)0.6152 (2)0.71814 (12)0.0636 (6)
C130.92573 (12)0.6490 (2)0.77862 (11)0.0567 (5)
C140.71632 (9)0.48976 (18)0.86470 (9)0.0436 (4)
C150.65938 (10)0.4277 (2)0.86667 (12)0.0596 (6)
C160.60208 (11)0.4993 (2)0.85812 (13)0.0667 (6)
C170.60088 (11)0.6368 (2)0.84824 (11)0.0589 (5)
C180.65601 (11)0.6988 (2)0.84519 (11)0.0586 (5)
C190.71301 (11)0.6250 (2)0.85320 (10)0.0525 (5)
C200.85865 (19)−0.0622 (3)0.97519 (18)0.0957 (10)
C210.80938 (19)−0.1530 (3)0.98260 (16)0.0963 (10)
C220.89018 (18)0.1465 (3)0.83444 (15)0.0930 (9)
C230.90252 (16)0.0103 (4)0.81830 (16)0.0989 (10)
C240.54361 (16)0.8430 (3)0.84361 (19)0.1038 (12)
H61.02760.74040.94010.083*
H210.76100.27820.93570.053*
H310.76790.34630.83550.049*
H810.96320.63250.98620.058*
H1010.77060.45250.75140.065*
H1110.79830.52570.66740.074*
H1210.89600.63950.68320.076*
H1310.96460.69940.78480.068*
H1510.66010.32300.87500.071*
H1610.55960.45020.85910.080*
H1810.65530.79100.83770.070*
H1910.74870.66690.85080.063*
H2010.9030−0.06391.01730.115*
H2020.8708−0.09130.93510.115*
H2110.7686−0.15860.93960.116*
H2120.7941−0.11771.01850.116*
H2130.8303−0.24730.99500.116*
H2210.93330.18810.86360.112*
H2220.87210.20190.79400.112*
H2310.8583−0.03650.79500.119*
H2320.9286−0.04050.85930.119*
H2330.92930.01300.78940.119*
H2410.54740.87360.80600.125*
H2420.57930.87400.87870.125*
H2430.50420.87410.84600.125*
U11U22U33U12U13U23
P0.0439 (3)0.0381 (3)0.0599 (3)−0.0019 (2)0.0197 (2)−0.0012 (2)
O10.0655 (8)0.0447 (7)0.0433 (7)−0.0119 (6)0.0239 (6)−0.0030 (6)
O20.0725 (10)0.0645 (9)0.0561 (9)−0.0060 (7)0.0350 (8)0.0033 (7)
O30.0837 (12)0.0446 (9)0.1457 (18)0.0093 (8)0.0673 (12)0.0225 (10)
O40.0446 (8)0.0607 (9)0.0785 (11)−0.0006 (7)0.0117 (7)−0.0075 (8)
O50.0616 (9)0.0879 (12)0.0692 (11)0.0157 (8)0.0167 (8)−0.0224 (9)
O60.0543 (9)0.0794 (11)0.0696 (10)−0.0216 (8)0.0174 (7)0.0139 (8)
O70.0596 (10)0.0626 (11)0.1338 (17)0.0164 (8)0.0414 (10)0.0119 (10)
C10.0509 (10)0.0410 (9)0.0514 (11)0.0028 (8)0.0236 (9)0.0050 (8)
C20.0418 (9)0.0380 (9)0.0562 (11)−0.0040 (8)0.0213 (8)0.0010 (8)
C30.0451 (10)0.0381 (9)0.0464 (10)−0.0037 (7)0.0169 (8)−0.0037 (8)
C40.0412 (9)0.0383 (9)0.0445 (10)−0.0008 (7)0.0170 (8)0.0002 (7)
C50.0448 (10)0.0414 (9)0.0437 (10)0.0087 (8)0.0169 (8)0.0033 (8)
C60.0461 (10)0.0426 (10)0.0511 (11)0.0087 (8)0.0214 (8)0.0098 (8)
C70.0418 (10)0.0459 (10)0.0584 (12)−0.0003 (8)0.0169 (9)0.0101 (9)
C80.0493 (11)0.0459 (10)0.0443 (11)−0.0060 (8)0.0106 (8)0.0032 (8)
C90.0514 (10)0.0378 (9)0.0433 (10)−0.0006 (8)0.0198 (8)0.0018 (7)
C100.0553 (12)0.0562 (12)0.0483 (12)0.0062 (9)0.0167 (9)−0.0012 (9)
C110.0753 (15)0.0636 (14)0.0431 (11)0.0190 (11)0.0189 (10)0.0050 (10)
C120.0793 (16)0.0655 (14)0.0563 (13)0.0187 (12)0.0371 (12)0.0177 (11)
C130.0600 (12)0.0579 (12)0.0601 (14)0.0096 (10)0.0316 (11)0.0160 (10)
C140.0445 (10)0.0403 (9)0.0432 (10)−0.0030 (8)0.0129 (8)−0.0045 (8)
C150.0497 (12)0.0424 (11)0.0826 (16)−0.0040 (9)0.0200 (11)−0.0020 (10)
C160.0469 (12)0.0520 (12)0.0978 (19)−0.0041 (10)0.0231 (12)−0.0002 (12)
C170.0513 (12)0.0538 (12)0.0698 (14)0.0071 (9)0.0204 (10)0.0034 (10)
C180.0631 (13)0.0425 (11)0.0710 (14)0.0055 (9)0.0262 (11)0.0090 (10)
C190.0526 (11)0.0445 (10)0.0634 (13)−0.0034 (9)0.0248 (10)0.0045 (9)
C200.134 (3)0.0501 (14)0.134 (3)0.0191 (15)0.085 (2)0.0209 (15)
C210.150 (3)0.0501 (14)0.093 (2)−0.0089 (17)0.050 (2)−0.0010 (14)
C220.128 (3)0.091 (2)0.0795 (19)0.0193 (19)0.0617 (19)0.0055 (16)
C230.093 (2)0.109 (2)0.102 (2)0.0270 (19)0.0449 (18)−0.0189 (19)
C240.084 (2)0.0640 (17)0.169 (4)0.0255 (15)0.053 (2)0.0175 (19)
P—O41.4524 (15)C11—C121.392 (3)
P—O51.5449 (17)C11—H1110.9082
P—O31.5551 (16)C12—C131.357 (3)
P—C21.8248 (19)C12—H1210.9322
O1—C11.356 (2)C13—H1310.9462
O1—C91.404 (2)C14—C191.374 (3)
O2—C11.194 (2)C14—C151.394 (3)
O3—C201.449 (3)C15—C161.381 (3)
O5—C221.450 (3)C15—H1511.0672
O6—C71.352 (2)C16—C171.391 (3)
O6—H60.8309C16—H1611.0483
O7—C171.367 (3)C17—C181.368 (3)
O7—C241.420 (3)C18—C191.390 (3)
C1—C21.509 (3)C18—H1810.9346
C2—C31.551 (3)C19—H1910.8967
C2—H210.9241C20—C211.455 (4)
C3—C41.515 (2)C20—H2011.0668
C3—C141.528 (3)C20—H2021.0668
C3—H311.0001C21—H2111.0385
C4—C91.366 (3)C21—H2121.0385
C4—C51.428 (3)C21—H2131.0385
C5—C61.419 (3)C22—C231.459 (4)
C5—C101.422 (3)C22—H2211.0092
C6—C131.415 (3)C22—H2221.0092
C6—C71.425 (3)C23—H2311.0166
C7—C81.360 (3)C23—H2321.0166
C8—C91.397 (3)C23—H2331.0166
C8—H810.8711C24—H2410.9270
C10—C111.374 (3)C24—H2420.9270
C10—H1010.9613C24—H2430.9270
O4—P—O5114.48 (10)C11—C12—H121119.9
O4—P—O3115.74 (11)C12—C13—C6120.9 (2)
O5—P—O3104.43 (11)C12—C13—H131119.6
O4—P—C2114.36 (9)C6—C13—H131119.6
O5—P—C2106.37 (9)C19—C14—C15117.34 (18)
O3—P—C299.90 (9)C19—C14—C3122.67 (17)
C1—O1—C9120.89 (15)C15—C14—C3119.98 (17)
C20—O3—P122.52 (17)C16—C15—C14121.5 (2)
C22—O5—P125.35 (18)C16—C15—H151119.3
C7—O6—H6109.5C14—C15—H151119.3
C17—O7—C24117.9 (2)C15—C16—C17119.8 (2)
O2—C1—O1118.05 (18)C15—C16—H161120.1
O2—C1—C2125.32 (18)C17—C16—H161120.1
O1—C1—C2116.61 (16)O7—C17—C18124.5 (2)
C1—C2—C3111.81 (15)O7—C17—C16116.0 (2)
C1—C2—P107.75 (13)C18—C17—C16119.4 (2)
C3—C2—P113.78 (13)C17—C18—C19120.0 (2)
C1—C2—H21107.8C17—C18—H181120.0
C3—C2—H21107.8C19—C18—H181120.0
P—C2—H21107.8C14—C19—C18121.9 (2)
C4—C3—C14113.67 (15)C14—C19—H191119.0
C4—C3—C2107.47 (15)C18—C19—H191119.0
C14—C3—C2111.86 (15)O3—C20—C21107.4 (3)
C4—C3—H31107.9O3—C20—H201110.2
C14—C3—H31107.9C21—C20—H201110.2
C2—C3—H31107.9O3—C20—H202110.2
C9—C4—C5117.07 (17)C21—C20—H202110.2
C9—C4—C3118.56 (16)H201—C20—H202108.5
C5—C4—C3124.35 (16)C20—C21—H211109.5
C6—C5—C10117.40 (18)C20—C21—H212109.5
C6—C5—C4120.10 (17)H211—C21—H212109.5
C10—C5—C4122.48 (18)C20—C21—H213109.5
C13—C6—C5119.73 (19)H211—C21—H213109.5
C13—C6—C7121.19 (19)H212—C21—H213109.5
C5—C6—C7119.08 (17)O5—C22—C23110.2 (3)
O6—C7—C8123.23 (19)O5—C22—H221109.6
O6—C7—C6116.41 (18)C23—C22—H221109.6
C8—C7—C6120.37 (18)O5—C22—H222109.6
C7—C8—C9119.15 (19)C23—C22—H222109.6
C7—C8—H81120.4H221—C22—H222108.1
C9—C8—H81120.4C22—C23—H231109.5
C4—C9—C8124.20 (17)C22—C23—H232109.5
C4—C9—O1121.96 (17)H231—C23—H232109.5
C8—C9—O1113.77 (16)C22—C23—H233109.5
C11—C10—C5121.0 (2)H231—C23—H233109.5
C11—C10—H101119.5H232—C23—H233109.5
C5—C10—H101119.5O7—C24—H241109.5
C10—C11—C12120.7 (2)O7—C24—H242109.5
C10—C11—H111119.7H241—C24—H242109.5
C12—C11—H111119.7O7—C24—H243109.5
C13—C12—C11120.2 (2)H241—C24—H243109.5
C13—C12—H121119.9H242—C24—H243109.5
O4—P—C2—C1−28.73 (16)C13—C6—C7—C8179.94 (18)
O5—P—C2—C3−31.54 (16)C5—C6—C7—C80.4 (3)
O4—P—O3—C20−58.5 (3)O6—C7—C8—C9−179.72 (18)
O5—P—O3—C2068.3 (3)C6—C7—C8—C90.4 (3)
C2—P—O3—C20178.2 (2)C5—C4—C9—C8−1.1 (3)
O4—P—O5—C22−3.4 (3)C3—C4—C9—C8−179.64 (17)
O3—P—O5—C22−131.0 (2)C5—C4—C9—O1175.78 (15)
C2—P—O5—C22123.9 (2)C3—C4—C9—O1−2.8 (3)
C9—O1—C1—O2179.21 (17)C7—C8—C9—C4−0.1 (3)
C9—O1—C1—C20.5 (2)C7—C8—C9—O1−177.13 (17)
O2—C1—C2—C3143.09 (19)C1—O1—C9—C422.1 (3)
O1—C1—C2—C3−38.3 (2)C1—O1—C9—C8−160.77 (17)
O2—C1—C2—P−91.2 (2)C6—C5—C10—C111.8 (3)
O1—C1—C2—P87.41 (17)C4—C5—C10—C11−179.95 (18)
O5—P—C2—C1−156.12 (13)C5—C10—C11—C121.1 (3)
O3—P—C2—C195.53 (15)C10—C11—C12—C13−3.0 (3)
O4—P—C2—C395.84 (15)C11—C12—C13—C61.9 (3)
O5—P—C2—C3−31.54 (16)C5—C6—C13—C121.0 (3)
O3—P—C2—C3−139.90 (15)C7—C6—C13—C12−178.5 (2)
C1—C2—C3—C452.53 (19)C4—C3—C14—C198.2 (3)
P—C2—C3—C4−69.83 (17)C2—C3—C14—C19130.13 (19)
C1—C2—C3—C14−72.89 (19)C4—C3—C14—C15−173.41 (18)
P—C2—C3—C14164.74 (12)C2—C3—C14—C15−51.5 (2)
C14—C3—C4—C990.9 (2)C19—C14—C15—C16−0.7 (3)
C2—C3—C4—C9−33.4 (2)C3—C14—C15—C16−179.2 (2)
C14—C3—C4—C5−87.6 (2)C14—C15—C16—C17−1.0 (4)
C2—C3—C4—C5148.11 (17)C24—O7—C17—C18−7.7 (4)
C9—C4—C5—C61.9 (3)C24—O7—C17—C16170.6 (3)
C3—C4—C5—C6−179.65 (16)C15—C16—C17—O7−176.4 (2)
C9—C4—C5—C10−176.39 (17)C15—C16—C17—C182.0 (4)
C3—C4—C5—C102.1 (3)O7—C17—C18—C19177.0 (2)
C10—C5—C6—C13−2.8 (3)C16—C17—C18—C19−1.3 (4)
C4—C5—C6—C13178.90 (17)C15—C14—C19—C181.4 (3)
C10—C5—C6—C7176.76 (17)C3—C14—C19—C18179.84 (19)
C4—C5—C6—C7−1.6 (3)C17—C18—C19—C14−0.4 (3)
C13—C6—C7—O60.0 (3)P—O3—C20—C21−162.7 (2)
C5—C6—C7—O6−179.46 (17)P—O5—C22—C23114.1 (3)
D—H···AD—HH···AD···AD—H···A
O6—H6···O4i0.831.872.701 (2)178
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O6—H6⋯O4i0.831.872.701 (2)178

Symmetry code: (i) .

  6 in total

1.  The Cambridge Structural Database: a quarter of a million crystal structures and rising.

Authors:  Frank H Allen
Journal:  Acta Crystallogr B       Date:  2002-05-29

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Isolation, structure elucidation, antioxidative and immunomodulatory properties of two novel dihydrocoumarins from Aloe vera.

Authors:  Xiu-feng Zhang; Hong-mei Wang; Yuan-li Song; Li-hua Nie; Lan-fen Wang; Bin Liu; Ping-ping Shen; Yang Liu
Journal:  Bioorg Med Chem Lett       Date:  2005-11-15       Impact factor: 2.823

4.  Regioselective synthesis and estrogenicity of (+/-)-8-alkyl-5,7-dihydroxy-4-(4-hydroxyphenyl)-3,4-dihydrocoumarins.

Authors:  Frederik Roelens; Kevin Huvaere; Willem Dhooge; Marjan Van Cleemput; Frank Comhaire; Denis De Keukeleire
Journal:  Eur J Med Chem       Date:  2005-06-13       Impact factor: 6.514

5.  Trifluoroacetic acid-mediated hydroarylation: synthesis of dihydrocoumarins and dihydroquinolones.

Authors:  Kelin Li; Lindsay N Foresee; Jon A Tunge
Journal:  J Org Chem       Date:  2005-04-01       Impact factor: 4.354

6.  Synthesis and biological evaluation of 4-arylcoumarin analogues of combretastatins.

Authors:  Christian Bailly; Christine Bal; Pascale Barbier; Sébastien Combes; Jean-Pierre Finet; Marie-Paule Hildebrand; Vincent Peyrot; Nicole Wattez
Journal:  J Med Chem       Date:  2003-12-04       Impact factor: 7.446

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.