| Literature DB >> 21202711 |
M Mahdi Najafpour, Małgorzata Hołyńska, Tadeusz Lis.
Abstract
The title compound, C(10)H(8)N(2)·C(8)H(10)O(8), is an example of a system with a short O⋯H⋯N hydrogen bond [O⋯N = 2.565 (3) Å]. The crystal structure comprises a 1:1 adduct between 4,4'-bipyridine and butane-1,2,3,4-tetra-carboxylic acid, where both components are centrosymmetric. The component mol-ecules are linked through strong O⋯H⋯N hydrogen bonds, forming chains extending approximately along [11]. The chains are inter-connected by O⋯H⋯O hydrogen bonds and weak stacking inter-actions involving the pyridyl rings of the 4,4'-bipyridine mol-ecules [centroid-centroid distance = 3.73 (2) Å and inter-planar distance = 3.35 (1) Å]. The H atom of the short O⋯H⋯N hydrogen bond is disordered over two positions with site occupancy factors of ca 0.6 and 0.4. One methylene group is disordered over two positions; the site occupancy factors are ca 0.9 and 0.1.Entities:
Year: 2008 PMID: 21202711 PMCID: PMC2961488 DOI: 10.1107/S1600536808011732
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C10H8N2·C8H10O8 | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 3002 reflections | |
| θ = 2–35º | |
| µ = 0.12 mm−1 | |
| α = 73.55 (5)º | |
| β = 81.34 (5)º | Plate, colourless |
| γ = 73.85 (5)º | 0.40 × 0.18 × 0.04 mm |
| Oxford Diffraction KM-4-CCD diffractometer | 1034 reflections with |
| Radiation source: fine-focus sealed tube | |
| Monochromator: graphite | θmax = 28.4º |
| θmin = 3.2º | |
| ω scans | |
| Absorption correction: none | |
| 3650 measured reflections | |
| 1946 independent reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| | |
| (Δ/σ)max < 0.001 | |
| 1946 reflections | Δρmax = 0.30 e Å−3 |
| 135 parameters | Δρmin = −0.19 e Å−3 |
| 2 restraints | Extinction correction: none |
| Primary atom site location: structure-invariant direct methods |
| Occ. (<1) | |||||
| O11 | 0.4836 (2) | 0.4390 (2) | 0.68732 (11) | 0.0338 (4) | |
| H1A | 0.6275 | 0.3764 | 0.6676 | 0.051* | 0.59 (3) |
| N1 | 0.9093 (3) | 0.2488 (2) | 0.61058 (14) | 0.0231 (4) | |
| H1B | 0.7625 | 0.3105 | 0.6381 | 0.035* | 0.41 (3) |
| C2 | 1.0784 (3) | 0.1253 (3) | 0.68554 (17) | 0.0265 (5) | |
| H2 | 1.0378 | 0.1051 | 0.7693 | 0.032* | |
| C3 | 1.3105 (3) | 0.0261 (3) | 0.64525 (16) | 0.0272 (5) | |
| H3 | 1.4260 | −0.0608 | 0.7012 | 0.033* | |
| C4 | 1.3754 (3) | 0.0531 (3) | 0.52342 (16) | 0.0208 (4) | |
| C5 | 1.1967 (3) | 0.1826 (3) | 0.44570 (16) | 0.0232 (5) | |
| H5 | 1.2318 | 0.2059 | 0.3615 | 0.028* | |
| C6 | 0.9677 (3) | 0.2764 (3) | 0.49322 (16) | 0.0237 (5) | |
| H6 | 0.8475 | 0.3640 | 0.4398 | 0.028* | |
| C11 | 0.1384 (3) | 0.4629 (3) | 0.97960 (16) | 0.0276 (5) | |
| H11 | 0.2287 | 0.5506 | 1.0016 | 0.033* | |
| C21A | 0.1846 (4) | 0.4914 (3) | 0.84558 (17) | 0.0250 (7) | 0.940 (6) |
| H21A | 0.1416 | 0.6412 | 0.8062 | 0.030* | 0.940 (6) |
| H21B | 0.0719 | 0.4285 | 0.8193 | 0.030* | 0.940 (6) |
| C31 | 0.4490 (4) | 0.3983 (3) | 0.80273 (18) | 0.0271 (5) | |
| O21 | 0.6106 (2) | 0.29297 (19) | 0.87162 (11) | 0.0272 (3) | |
| C12 | 0.2377 (3) | 0.2422 (3) | 1.05080 (18) | 0.0262 (5) | |
| O12 | 0.1933 (2) | 0.1051 (2) | 1.00261 (12) | 0.0316 (4) | |
| H12 | 0.2479 | −0.0148 | 1.0450 | 0.047* | |
| O22 | 0.3354 (2) | 0.1971 (2) | 1.14272 (12) | 0.0387 (4) | |
| C21B | 0.290 (6) | 0.552 (3) | 0.875 (2) | 0.014 (9)* | 0.060 (6) |
| H21C | 0.4014 | 0.6144 | 0.9028 | 0.017* | 0.060 (6) |
| H21D | 0.1785 | 0.6655 | 0.8207 | 0.017* | 0.060 (6) |
| O11 | 0.0236 (8) | 0.0379 (10) | 0.0249 (9) | 0.0087 (7) | 0.0034 (6) | −0.0030 (7) |
| N1 | 0.0167 (9) | 0.0238 (10) | 0.0249 (10) | 0.0016 (7) | 0.0005 (7) | −0.0074 (8) |
| C2 | 0.0243 (11) | 0.0321 (12) | 0.0190 (11) | −0.0009 (10) | 0.0012 (9) | −0.0073 (9) |
| C3 | 0.0207 (11) | 0.0308 (12) | 0.0233 (12) | 0.0025 (9) | −0.0028 (9) | −0.0042 (10) |
| C4 | 0.0178 (10) | 0.0214 (11) | 0.0220 (11) | −0.0027 (8) | 0.0003 (9) | −0.0066 (9) |
| C5 | 0.0242 (11) | 0.0228 (11) | 0.0191 (11) | −0.0023 (9) | 0.0016 (9) | −0.0051 (9) |
| C6 | 0.0226 (11) | 0.0224 (11) | 0.0202 (11) | 0.0001 (9) | −0.0043 (9) | −0.0006 (9) |
| C11 | 0.0227 (11) | 0.0240 (12) | 0.0251 (11) | 0.0066 (9) | 0.0032 (9) | −0.0036 (9) |
| C21A | 0.0237 (13) | 0.0196 (13) | 0.0236 (13) | 0.0035 (10) | −0.0008 (10) | −0.0021 (10) |
| C31 | 0.0285 (12) | 0.0209 (12) | 0.0264 (12) | −0.0009 (10) | 0.0038 (10) | −0.0056 (10) |
| O21 | 0.0232 (7) | 0.0243 (8) | 0.0267 (8) | 0.0026 (6) | −0.0017 (7) | −0.0035 (7) |
| C12 | 0.0179 (11) | 0.0265 (12) | 0.0268 (12) | 0.0039 (9) | 0.0072 (9) | −0.0088 (10) |
| O12 | 0.0290 (8) | 0.0227 (8) | 0.0353 (9) | 0.0008 (7) | −0.0042 (7) | −0.0015 (7) |
| O22 | 0.0421 (9) | 0.0361 (9) | 0.0264 (8) | 0.0121 (7) | −0.0098 (7) | −0.0076 (7) |
| N1—C6 | 1.332 (2) | C4—C5 | 1.400 (3) |
| N1—C2 | 1.336 (2) | C4—C4i | 1.497 (4) |
| C31—O11 | 1.293 (3) | C5—C6 | 1.387 (3) |
| C31—O21 | 1.237 (2) | C5—H5 | 0.95 |
| C12—O12 | 1.331 (2) | C6—H6 | 0.95 |
| C12—O22 | 1.202 (2) | C11—C21A | 1.512 (3) |
| O11—C31 | 1.293 (2) | C11—C12 | 1.519 (3) |
| O11—H1A | 0.84 | C11—C11ii | 1.549 (4) |
| N1—H1B | 0.88 | C11—H11 | 1.00 |
| C2—C3 | 1.382 (3) | C21A—C31 | 1.523 (3) |
| C2—H2 | 0.95 | C21A—H21A | 0.99 |
| C3—C4 | 1.387 (3) | C21A—H21B | 0.99 |
| C3—H3 | 0.95 | O12—H12 | 0.84 |
| C6—N1—C2 | 118.6 (2) | C4—C5—H5 | 120.4 |
| C21A—C11—C12 | 113.4 (2) | N1—C6—C5 | 122.73 (17) |
| C21A—C11—C11ii | 113.0 (2) | N1—C6—H6 | 118.6 |
| O21—C31—O11 | 124.2 (2) | C5—C6—H6 | 118.6 |
| O22—C12—O12 | 124.0 (2) | C12—C11—C11ii | 109.00 (19) |
| C31—O11—H1A | 109.5 | C21A—C11—H11 | 107.0 |
| C6—N1—H1B | 120.7 | C12—C11—H11 | 107.0 |
| C2—N1—H1B | 120.7 | C11ii—C11—H11 | 107.0 |
| N1—C2—C3 | 122.18 (18) | C11—C21A—C31 | 114.83 (18) |
| N1—C2—H2 | 118.9 | C11—C21A—H21A | 108.6 |
| C3—C2—H2 | 118.9 | C31—C21A—H21A | 108.6 |
| C2—C3—C4 | 120.20 (18) | C11—C21A—H21B | 108.6 |
| C2—C3—H3 | 119.9 | C31—C21A—H21B | 108.6 |
| C4—C3—H3 | 119.9 | H21A—C21A—H21B | 107.5 |
| C3—C4—C5 | 117.12 (17) | O21—C31—C21A | 123.24 (18) |
| C3—C4—C4i | 121.7 (2) | O11—C31—C21A | 112.54 (18) |
| C5—C4—C4i | 121.2 (2) | O22—C12—C11 | 123.9 (2) |
| C6—C5—C4 | 119.19 (17) | O12—C12—C11 | 112.07 (18) |
| C6—C5—H5 | 120.4 | C12—O12—H12 | 109.5 |
| C6—N1—C2—C3 | 0.0 (3) | C11ii—C11—C21A—C31 | −173.3 (2) |
| N1—C2—C3—C4 | 0.1 (3) | C11—C21A—C31—O21 | 5.5 (3) |
| C2—C3—C4—C5 | −0.2 (3) | C11—C21A—C31—O11 | −175.45 (18) |
| C2—C3—C4—C4i | −179.6 (2) | C21A—C11—C12—O22 | 141.0 (2) |
| C3—C4—C5—C6 | 0.1 (3) | C11ii—C11—C12—O22 | −92.2 (3) |
| C4i—C4—C5—C6 | 179.53 (19) | C21A—C11—C12—O12 | −42.0 (2) |
| C2—N1—C6—C5 | −0.1 (3) | C11ii—C11—C12—O12 | 84.8 (2) |
| C4—C5—C6—N1 | 0.0 (3) | C5—C4—C4i—C3i | 0.6 (4) |
| C12—C11—C21A—C31 | −48.6 (3) |
| H··· | ||||
| O11—H1A···N1 | 0.84 | 1.73 | 2.565 (3) | 173 |
| N1—H1B···O11 | 0.88 | 1.69 | 2.565 (3) | 177 |
| O12—H12···O21iii | 0.84 | 1.91 | 2.747 (3) | 175 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O11—H1 | 0.84 | 1.73 | 2.565 (3) | 173 |
| N1—H1 | 0.88 | 1.69 | 2.565 (3) | 177 |
| O12—H12⋯O21iii | 0.84 | 1.91 | 2.747 (3) | 175 |
Symmetry code: (iii) .