| Literature DB >> 21837032 |
Abstract
The asymmetric unit of the title compound, 2C(12)H(8)N(2)·C(8)H(10)O(8)·2H(2)O, contains one 1,10-phenanthroline mol-ecule, one half-mol-ecule of butane-1,2,3,4-tetra-carb-oxy-lic acid (H(4)BTC) and a water mol-ecule, with the complete tetra-acid generated by crystallographic inversion symmetry. Inter-molecular O-H⋯O hydrogen bonds and π-π stacking inter-actions [centroid-centroid distances = 3.672 (2) and 3.708 (2) Å form an extensive three-dimensional network, which consolidates the crystal packing.Entities:
Year: 2011 PMID: 21837032 PMCID: PMC3151845 DOI: 10.1107/S1600536811021398
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| 2C12H8N2·C8H10O8·2H2O | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 4546 reflections | |
| θ = 3.1–27.5° | |
| µ = 0.11 mm−1 | |
| α = 84.37 (3)° | |
| β = 70.12 (3)° | Block, colorless |
| γ = 72.72 (3)° | 0.58 × 0.34 × 0.10 mm |
| Rigaku R-AXIS RAPID diffractometer | 3396 independent reflections |
| Radiation source: fine-focus sealed tube | 1960 reflections with |
| graphite | |
| ω scans | θmax = 27.5°, θmin = 3.1° |
| Absorption correction: multi-scan ( | |
| 7400 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3396 reflections | (Δ/σ)max < 0.001 |
| 208 parameters | Δρmax = 0.30 e Å−3 |
| 0 restraints | Δρmin = −0.34 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | −0.5184 (3) | 0.7050 (2) | 0.4404 (3) | 0.0745 (7) | |
| H1A | −0.5899 | 0.7919 | 0.4447 | 0.089* | |
| O2 | −0.3498 (3) | 0.8187 (2) | 0.4902 (3) | 0.0734 (7) | |
| C1 | −0.3757 (4) | 0.7102 (3) | 0.4718 (3) | 0.0434 (6) | |
| C2 | −0.2475 (4) | 0.5669 (3) | 0.4825 (3) | 0.0484 (6) | |
| H2A | −0.2240 | 0.5103 | 0.4055 | 0.058* | |
| H2B | −0.3086 | 0.5200 | 0.5619 | 0.058* | |
| C3 | −0.0619 (3) | 0.5737 (2) | 0.4898 (2) | 0.0389 (5) | |
| H3A | −0.0862 | 0.6351 | 0.5647 | 0.047* | |
| C4 | 0.0425 (4) | 0.6356 (2) | 0.3614 (2) | 0.0408 (5) | |
| O3 | 0.0605 (3) | 0.5952 (2) | 0.25216 (19) | 0.0652 (6) | |
| O4 | 0.1121 (3) | 0.73303 (19) | 0.37990 (18) | 0.0532 (5) | |
| H4A | 0.1639 | 0.7706 | 0.3054 | 0.064* | |
| N1 | 0.0963 (3) | 1.0528 (2) | 0.2323 (2) | 0.0514 (6) | |
| C5 | −0.0353 (5) | 1.1744 (3) | 0.2717 (3) | 0.0613 (8) | |
| H5A | −0.0890 | 1.1934 | 0.3629 | 0.074* | |
| C6 | −0.0969 (5) | 1.2746 (3) | 0.1844 (4) | 0.0705 (9) | |
| H6A | −0.1915 | 1.3571 | 0.2170 | 0.085* | |
| C7 | −0.0175 (5) | 1.2505 (3) | 0.0505 (3) | 0.0677 (9) | |
| H7A | −0.0565 | 1.3168 | −0.0096 | 0.081* | |
| C8 | 0.1230 (4) | 1.1255 (3) | 0.0040 (3) | 0.0546 (7) | |
| C9 | 0.2172 (5) | 1.0959 (4) | −0.1356 (3) | 0.0696 (9) | |
| H9A | 0.1810 | 1.1599 | −0.1982 | 0.084* | |
| C10 | 0.3561 (6) | 0.9781 (4) | −0.1774 (3) | 0.0734 (10) | |
| H10A | 0.4185 | 0.9633 | −0.2687 | 0.088* | |
| C11 | 0.4106 (4) | 0.8744 (3) | −0.0853 (3) | 0.0571 (7) | |
| C12 | 0.5552 (5) | 0.7492 (4) | −0.1252 (4) | 0.0746 (10) | |
| H12A | 0.6236 | 0.7328 | −0.2154 | 0.089* | |
| C13 | 0.5961 (5) | 0.6515 (4) | −0.0328 (4) | 0.0777 (10) | |
| H13A | 0.6935 | 0.5690 | −0.0586 | 0.093* | |
| C14 | 0.4888 (5) | 0.6777 (3) | 0.1014 (4) | 0.0709 (9) | |
| H14A | 0.5149 | 0.6093 | 0.1639 | 0.085* | |
| C15 | 0.3153 (4) | 0.8952 (3) | 0.0537 (3) | 0.0466 (6) | |
| C16 | 0.1741 (4) | 1.0267 (3) | 0.0985 (2) | 0.0449 (6) | |
| N2 | 0.3519 (3) | 0.7946 (2) | 0.1444 (2) | 0.0552 (6) | |
| O5 | 0.2570 (3) | 0.9523 (2) | 0.4390 (2) | 0.0597 (6) | |
| H5B | 0.2932 | 1.0275 | 0.4404 | 0.072* | |
| H5C | 0.1736 | 0.9754 | 0.4011 | 0.072* |
| O1 | 0.0631 (13) | 0.0483 (11) | 0.131 (2) | −0.0092 (10) | −0.0622 (14) | 0.0059 (12) |
| O2 | 0.0697 (14) | 0.0409 (11) | 0.124 (2) | −0.0077 (10) | −0.0544 (14) | −0.0078 (11) |
| C1 | 0.0420 (13) | 0.0434 (13) | 0.0460 (14) | −0.0107 (11) | −0.0188 (11) | 0.0070 (11) |
| C2 | 0.0450 (14) | 0.0369 (12) | 0.0677 (17) | −0.0104 (11) | −0.0269 (13) | 0.0080 (12) |
| C3 | 0.0394 (12) | 0.0340 (11) | 0.0442 (13) | −0.0094 (10) | −0.0166 (10) | 0.0046 (10) |
| C4 | 0.0475 (14) | 0.0363 (12) | 0.0392 (13) | −0.0102 (10) | −0.0178 (11) | 0.0053 (10) |
| O3 | 0.0941 (17) | 0.0659 (13) | 0.0441 (11) | −0.0352 (12) | −0.0239 (11) | 0.0055 (9) |
| O4 | 0.0683 (13) | 0.0509 (11) | 0.0502 (11) | −0.0332 (10) | −0.0205 (9) | 0.0110 (8) |
| N1 | 0.0597 (14) | 0.0524 (13) | 0.0431 (12) | −0.0176 (11) | −0.0171 (11) | 0.0022 (10) |
| C5 | 0.068 (2) | 0.0575 (17) | 0.0536 (17) | −0.0092 (15) | −0.0186 (15) | −0.0078 (14) |
| C6 | 0.077 (2) | 0.0546 (17) | 0.080 (2) | −0.0035 (16) | −0.0384 (19) | −0.0002 (16) |
| C7 | 0.082 (2) | 0.0611 (19) | 0.070 (2) | −0.0191 (17) | −0.0424 (19) | 0.0141 (16) |
| C8 | 0.0687 (18) | 0.0576 (16) | 0.0503 (16) | −0.0299 (15) | −0.0282 (14) | 0.0125 (13) |
| C9 | 0.093 (3) | 0.083 (2) | 0.0443 (16) | −0.041 (2) | −0.0266 (17) | 0.0164 (16) |
| C10 | 0.091 (3) | 0.096 (3) | 0.0380 (15) | −0.048 (2) | −0.0102 (16) | 0.0071 (17) |
| C11 | 0.0575 (17) | 0.0677 (18) | 0.0488 (16) | −0.0326 (15) | −0.0060 (13) | −0.0067 (14) |
| C12 | 0.066 (2) | 0.086 (2) | 0.066 (2) | −0.0365 (19) | 0.0029 (17) | −0.0179 (19) |
| C13 | 0.058 (2) | 0.064 (2) | 0.098 (3) | −0.0149 (16) | −0.0048 (19) | −0.025 (2) |
| C14 | 0.068 (2) | 0.0519 (17) | 0.082 (2) | −0.0128 (15) | −0.0131 (18) | −0.0047 (16) |
| C15 | 0.0533 (15) | 0.0488 (14) | 0.0434 (14) | −0.0281 (12) | −0.0121 (12) | 0.0034 (11) |
| C16 | 0.0548 (15) | 0.0496 (14) | 0.0382 (13) | −0.0246 (12) | −0.0179 (11) | 0.0054 (11) |
| N2 | 0.0594 (15) | 0.0461 (12) | 0.0576 (14) | −0.0170 (11) | −0.0144 (12) | 0.0017 (11) |
| O5 | 0.0634 (13) | 0.0495 (11) | 0.0780 (14) | −0.0128 (9) | −0.0418 (11) | 0.0047 (10) |
| O1—C1 | 1.302 (3) | C7—H7A | 0.9300 |
| O1—H1A | 0.8734 | C8—C16 | 1.406 (4) |
| O2—C1 | 1.196 (3) | C8—C9 | 1.431 (4) |
| C1—C2 | 1.499 (3) | C9—C10 | 1.333 (5) |
| C2—C3 | 1.525 (3) | C9—H9A | 0.9300 |
| C2—H2A | 0.9700 | C10—C11 | 1.423 (5) |
| C2—H2B | 0.9700 | C10—H10A | 0.9300 |
| C3—C4 | 1.514 (3) | C11—C12 | 1.399 (5) |
| C3—C3i | 1.540 (4) | C11—C15 | 1.416 (4) |
| C3—H3A | 0.9800 | C12—C13 | 1.359 (5) |
| C4—O3 | 1.214 (3) | C12—H12A | 0.9300 |
| C4—O4 | 1.303 (3) | C13—C14 | 1.393 (5) |
| O4—H4A | 0.8635 | C13—H13A | 0.9300 |
| N1—C5 | 1.330 (4) | C14—N2 | 1.321 (4) |
| N1—C16 | 1.361 (3) | C14—H14A | 0.9300 |
| C5—C6 | 1.387 (4) | C15—N2 | 1.354 (4) |
| C5—H5A | 0.9300 | C15—C16 | 1.438 (4) |
| C6—C7 | 1.359 (5) | O5—H5B | 0.8756 |
| C6—H6A | 0.9300 | O5—H5C | 0.8533 |
| C7—C8 | 1.393 (4) | ||
| Cg1···Cg3ii | 3.672 (2) | Cg2···Cg3iii | 3.708 (2) |
| C1—O1—H1A | 106.5 | C7—C8—C16 | 118.4 (3) |
| O2—C1—O1 | 123.2 (2) | C7—C8—C9 | 122.2 (3) |
| O2—C1—C2 | 123.5 (2) | C16—C8—C9 | 119.4 (3) |
| O1—C1—C2 | 113.4 (2) | C10—C9—C8 | 121.1 (3) |
| C1—C2—C3 | 112.9 (2) | C10—C9—H9A | 119.5 |
| C1—C2—H2A | 109.0 | C8—C9—H9A | 119.5 |
| C3—C2—H2A | 109.0 | C9—C10—C11 | 121.3 (3) |
| C1—C2—H2B | 109.0 | C9—C10—H10A | 119.4 |
| C3—C2—H2B | 109.0 | C11—C10—H10A | 119.4 |
| H2A—C2—H2B | 107.8 | C12—C11—C15 | 117.1 (3) |
| C4—C3—C2 | 109.7 (2) | C12—C11—C10 | 123.0 (3) |
| C4—C3—C3i | 108.5 (2) | C15—C11—C10 | 119.8 (3) |
| C2—C3—C3i | 112.0 (2) | C13—C12—C11 | 120.3 (3) |
| C4—C3—H3A | 108.9 | C13—C12—H12A | 119.8 |
| C2—C3—H3A | 108.9 | C11—C12—H12A | 119.8 |
| C3i—C3—H3A | 108.9 | C12—C13—C14 | 118.6 (3) |
| O3—C4—O4 | 124.0 (2) | C12—C13—H13A | 120.7 |
| O3—C4—C3 | 122.1 (2) | C14—C13—H13A | 120.7 |
| O4—C4—C3 | 113.9 (2) | N2—C14—C13 | 123.5 (4) |
| C4—O4—H4A | 111.9 | N2—C14—H14A | 118.2 |
| C5—N1—C16 | 117.5 (2) | C13—C14—H14A | 118.2 |
| N1—C5—C6 | 123.7 (3) | N2—C15—C11 | 122.0 (3) |
| N1—C5—H5A | 118.1 | N2—C15—C16 | 119.6 (2) |
| C6—C5—H5A | 118.1 | C11—C15—C16 | 118.5 (3) |
| C7—C6—C5 | 119.1 (3) | N1—C16—C8 | 121.9 (3) |
| C7—C6—H6A | 120.4 | N1—C16—C15 | 118.4 (2) |
| C5—C6—H6A | 120.4 | C8—C16—C15 | 119.7 (2) |
| C6—C7—C8 | 119.4 (3) | C14—N2—C15 | 118.3 (3) |
| C6—C7—H7A | 120.3 | H5B—O5—H5C | 107.6 |
| C8—C7—H7A | 120.3 |
| Cg1, Cg2 and Cg3 are the centroids of the N1/C5-C8/C16/, N2/C14-C11/C15, and C8-C11/C15/C16, rings respectively. |
| H··· | ||||
| O1—H1A···O5iv | 0.87 | 1.70 | 2.565 (3) | 172 |
| O4—H4A···N2 | 0.86 | 1.90 | 2.723 (3) | 159 |
| O5—H5B···O2v | 0.88 | 1.98 | 2.817 (3) | 160 |
| O5—H5C···N1 | 0.85 | 2.09 | 2.858 (3) | 149 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1—H1 | 0.87 | 1.70 | 2.565 (3) | 172 |
| O4—H4 | 0.86 | 1.90 | 2.723 (3) | 159 |
| O5—H5 | 0.88 | 1.98 | 2.817 (3) | 160 |
| O5—H5 | 0.85 | 2.09 | 2.858 (3) | 149 |
Symmetry codes: (iii) ; (iv) .