Literature DB >> 21202120

7-Nitro-5H-1-benzothio-pyrano[2,3-b]pyridin-5-one.

Muhammad Naeem Khan, M Nawaz Tahir, Misbahul Ain Khan, Islam Ullah Khan, Muhammad Nadeem Arshad.   

Abstract

In the mol-ecule of the title compound, C(12)H(6)N(2)O(3)S, the central heterocyclic ring is oriented at dihedral angles of 3.25 (6) and 2.28 (7)° with respect to the benzene and pyridine rings, respectively. The dihedral angle between the benzene and pyridine rings is 5.53 (7)°. In the crystal structure, inter-molecular C-H⋯O hydrogen bonds link the mol-ecules into chains.

Entities:  

Year:  2008        PMID: 21202120      PMCID: PMC2960905          DOI: 10.1107/S1600536808007150

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background, see: Acheson et al. (1976 ▶); Lesher et al. (1962 ▶); Archer et al. (1982 ▶, 1988 ▶); Showalter et al. (1988 ▶). For related structures, see: Atkinson et al. (2006 ▶). For related literature, see: Mann & Reid (1952 ▶); Hidetoshi (1997 ▶); Kurger & Mann (1955 ▶). For details of the Cambridge Structural Database, see: Allen (2002 ▶).

Experimental

Crystal data

C12H6N2O3S M = 258.25 Orthorhombic, a = 24.822 (2) Å b = 3.8884 (2) Å c = 10.8505 (7) Å V = 1047.28 (12) Å3 Z = 4 Mo Kα radiation μ = 0.31 mm−1 T = 296 (2) K 0.25 × 0.12 × 0.08 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.927, T max = 0.976 6571 measured reflections 2491 independent reflections 2038 reflections with I > 2σ(I) R int = 0.031

Refinement

R[F 2 > 2σ(F 2)] = 0.036 wR(F 2) = 0.083 S = 1.02 2491 reflections 163 parameters 1 restraint H-atom parameters constrained Δρmax = 0.21 e Å−3 Δρmin = −0.21 e Å−3 Absolute structure: Flack (1983 ▶), 1047 Friedel pairs Flack parameter: 0.03 (8) Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: APEX2; data reduction: SAINT (Bruker, 2007 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and PLATON (Spek, 2003 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶) and PLATON. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808007150/hk2433sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808007150/hk2433Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C12H6N2O3SF000 = 528
Mr = 258.25Dx = 1.638 Mg m3
Orthorhombic, Pca21Mo Kα radiation λ = 0.71073 Å
Hall symbol: P 2c -2acCell parameters from 1444 reflections
a = 24.822 (2) Åθ = 1.7–29.2º
b = 3.8884 (2) ŵ = 0.31 mm1
c = 10.8505 (7) ÅT = 296 (2) K
V = 1047.28 (12) Å3Prismatic, light yellow
Z = 40.25 × 0.12 × 0.08 mm
Bruker KappaAPEXII CCD diffractometer2491 independent reflections
Radiation source: fine-focus sealed tube2038 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.031
Detector resolution: 7.5 pixels mm-1θmax = 29.1º
T = 296(2) Kθmin = 2.5º
ω scansh = −31→32
Absorption correction: multi-scan(SADABS; Bruker, 2005)k = −5→5
Tmin = 0.927, Tmax = 0.976l = −14→13
6571 measured reflections
Refinement on F2Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: fullH-atom parameters constrained
R[F2 > 2σ(F2)] = 0.036  w = 1/[σ2(Fo2) + (0.0408P)2] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.083(Δ/σ)max < 0.001
S = 1.02Δρmax = 0.21 e Å3
2491 reflectionsΔρmin = −0.21 e Å3
163 parametersExtinction correction: none
1 restraintAbsolute structure: Flack (1983), 1047 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: 0.03 (8)
Secondary atom site location: difference Fourier map
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.39024 (2)0.42115 (12)0.39781 (5)0.03676 (14)
O10.12993 (7)0.2278 (5)0.3058 (2)0.0694 (6)
O20.15811 (8)−0.0812 (6)0.1535 (2)0.0660 (6)
O30.34609 (7)−0.1679 (5)0.06332 (15)0.0491 (5)
N10.16584 (8)0.1026 (5)0.2436 (2)0.0433 (5)
N20.48349 (8)0.3607 (5)0.3026 (2)0.0452 (5)
C10.32646 (8)0.3151 (5)0.34578 (19)0.0285 (4)
C20.28373 (9)0.4190 (5)0.4212 (2)0.0353 (5)
H20.29100.53380.49460.042*
C30.23123 (8)0.3542 (5)0.3888 (2)0.0354 (5)
H30.20290.42640.43840.042*
C40.22173 (9)0.1777 (5)0.2796 (2)0.0336 (5)
C50.26260 (9)0.0689 (5)0.2047 (2)0.0321 (5)
H50.2547−0.05170.13290.039*
C60.31604 (8)0.1380 (5)0.23549 (19)0.0282 (4)
C70.35825 (9)0.0152 (5)0.1503 (2)0.0314 (5)
C80.41454 (9)0.1140 (5)0.17226 (19)0.0313 (4)
C90.45386 (10)0.0293 (6)0.0858 (2)0.0440 (6)
H90.4444−0.08170.01300.053*
C100.50665 (11)0.1111 (6)0.1089 (3)0.0522 (7)
H100.53340.05780.05190.063*
C110.51950 (10)0.2730 (7)0.2176 (3)0.0528 (7)
H110.55550.32430.23260.063*
C120.43215 (9)0.2827 (5)0.27847 (19)0.0333 (5)
U11U22U33U12U13U23
S10.0323 (3)0.0429 (3)0.0350 (3)−0.0032 (2)−0.0032 (3)−0.0060 (3)
O10.0317 (10)0.0938 (13)0.0825 (15)0.0109 (11)0.0082 (11)−0.0090 (13)
O20.0366 (11)0.0929 (15)0.0685 (14)−0.0117 (10)−0.0072 (11)−0.0173 (12)
O30.0395 (10)0.0618 (11)0.0458 (10)−0.0038 (8)0.0042 (8)−0.0236 (9)
N10.0265 (11)0.0552 (13)0.0481 (12)0.0024 (10)0.0022 (9)0.0093 (11)
N20.0309 (10)0.0479 (11)0.0569 (13)−0.0041 (9)−0.0028 (10)0.0007 (10)
C10.0267 (10)0.0267 (9)0.0322 (10)−0.0001 (8)−0.0014 (9)0.0027 (8)
C20.0412 (13)0.0361 (10)0.0285 (13)0.0011 (9)0.0020 (10)−0.0011 (9)
C30.0311 (10)0.0384 (10)0.0366 (12)0.0055 (8)0.0114 (10)0.0004 (12)
C40.0261 (11)0.0352 (10)0.0395 (12)0.0001 (9)−0.0012 (9)0.0088 (10)
C50.0308 (12)0.0350 (10)0.0305 (10)−0.0006 (9)−0.0009 (9)0.0020 (9)
C60.0282 (12)0.0273 (9)0.0290 (10)−0.0011 (8)−0.0007 (9)0.0035 (8)
C70.0307 (12)0.0349 (10)0.0285 (11)−0.0004 (9)0.0023 (10)0.0008 (9)
C80.0295 (11)0.0308 (10)0.0337 (11)0.0023 (9)0.0017 (10)0.0027 (9)
C90.0391 (14)0.0458 (12)0.0471 (14)0.0004 (11)0.0097 (11)0.0000 (11)
C100.0334 (15)0.0552 (15)0.0681 (18)−0.0003 (11)0.0193 (13)−0.0021 (14)
C110.0279 (13)0.0528 (14)0.078 (2)−0.0015 (11)0.0018 (14)0.0024 (15)
C120.0284 (12)0.0301 (10)0.0414 (12)−0.0003 (9)−0.0018 (10)0.0033 (9)
S1—C11.731 (2)C5—C61.394 (3)
S1—C121.746 (2)C5—H50.9300
N1—O11.219 (3)C7—O31.220 (3)
N1—O21.226 (3)C7—C81.469 (3)
N1—C41.471 (3)C7—C61.476 (3)
N2—C111.329 (3)C8—C91.393 (3)
C1—C21.400 (3)C9—C101.372 (4)
C1—C61.405 (3)C9—H90.9300
C2—C31.373 (3)C10—C111.374 (4)
C2—H20.9300C10—H100.9300
C3—H30.9300C11—H110.9300
C4—C31.389 (3)C12—N21.336 (3)
C5—C41.367 (3)C12—C81.396 (3)
C1—S1—C12103.27 (10)C5—C6—C7117.57 (19)
O1—N1—O2124.0 (2)C1—C6—C7124.14 (18)
O1—N1—C4117.6 (2)O3—C7—C8120.90 (19)
O2—N1—C4118.4 (2)O3—C7—C6119.84 (19)
C11—N2—C12116.6 (2)C8—C7—C6119.27 (18)
C2—C1—C6120.01 (19)C9—C8—C12116.6 (2)
C2—C1—S1115.70 (16)C9—C8—C7119.7 (2)
C6—C1—S1124.28 (16)C12—C8—C7123.69 (19)
C3—C2—C1121.1 (2)C10—C9—C8119.4 (2)
C3—C2—H2119.5C10—C9—H9120.3
C1—C2—H2119.5C8—C9—H9120.3
C2—C3—C4118.1 (2)C9—C10—C11119.0 (2)
C2—C3—H3121.0C9—C10—H10120.5
C4—C3—H3121.0C11—C10—H10120.5
C5—C4—C3122.3 (2)N2—C11—C10123.8 (2)
C5—C4—N1118.7 (2)N2—C11—H11118.1
C3—C4—N1119.0 (2)C10—C11—H11118.1
C4—C5—C6120.3 (2)N2—C12—C8124.5 (2)
C4—C5—H5119.9N2—C12—S1110.68 (17)
C6—C5—H5119.9C8—C12—S1124.79 (17)
C5—C6—C1118.29 (19)
C12—S1—C1—C2−175.98 (15)C4—C5—C6—C11.2 (3)
C12—S1—C1—C63.75 (19)C4—C5—C6—C7−179.64 (18)
C1—S1—C12—N2177.32 (15)O3—C7—C6—C5−6.9 (3)
C1—S1—C12—C8−2.6 (2)C8—C7—C6—C5173.52 (18)
O1—N1—C4—C5−173.6 (2)O3—C7—C6—C1172.23 (19)
O2—N1—C4—C56.4 (3)C8—C7—C6—C1−7.3 (3)
O1—N1—C4—C36.8 (3)O3—C7—C8—C97.0 (3)
O2—N1—C4—C3−173.2 (2)C6—C7—C8—C9−173.5 (2)
C12—N2—C11—C100.2 (4)O3—C7—C8—C12−171.0 (2)
C6—C1—C2—C3−0.7 (3)C6—C7—C8—C128.6 (3)
S1—C1—C2—C3179.00 (16)C7—C8—C9—C10−177.6 (2)
S1—C1—C6—C5179.95 (15)C12—C8—C9—C100.5 (3)
C2—C1—C6—C5−0.3 (3)C8—C9—C10—C110.4 (4)
S1—C1—C6—C70.8 (3)C9—C10—C11—N2−0.8 (4)
C2—C1—C6—C7−179.47 (18)S1—C12—N2—C11−179.05 (18)
C1—C2—C3—C41.0 (3)C8—C12—N2—C110.8 (3)
C5—C4—C3—C2−0.1 (3)N2—C12—C8—C9−1.2 (3)
N1—C4—C3—C2179.43 (19)S1—C12—C8—C9178.70 (16)
C6—C5—C4—C3−1.0 (3)N2—C12—C8—C7176.82 (19)
C6—C5—C4—N1179.49 (18)S1—C12—C8—C7−3.3 (3)
D—H···AD—HH···AD···AD—H···A
C3—H3···O3i0.932.413.275 (3)155
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C3—H3⋯O3i0.932.413.275 (3)155

Symmetry code: (i) .

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